Basic Information

Gene Symbol
stc
Assembly
GCA_030064505.1
Location
JAOPFQ010000003.1:21799575-21804123[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 2 1.7e+04 -4.3 1.6 15 19 481 485 480 485 0.81
2 15 0.15 1.3e+03 -0.6 0.4 4 10 514 520 513 522 0.94
3 15 7.6e-05 0.63 10.0 21.2 3 18 530 545 516 546 0.87
4 15 0.005 41 4.2 14.4 1 18 582 599 582 600 0.95
5 15 0.05 4.2e+02 1.0 1.9 1 10 609 618 609 618 0.94
6 15 1.4 1.2e+04 -3.7 0.6 6 10 628 632 627 632 0.88
7 15 2.7e-09 2.3e-05 24.2 14.2 1 18 638 655 638 656 0.97
8 15 0.72 6e+03 -2.7 0.8 5 10 685 690 685 690 0.95
9 15 0.0062 52 3.9 11.7 4 18 703 717 696 718 0.86
10 15 0.0019 16 5.5 8.2 1 11 758 768 758 769 0.96
11 15 4e-10 3.3e-06 26.9 12.4 1 19 785 803 785 803 0.98
12 15 2 1.7e+04 -4.5 1.2 6 10 832 836 832 836 0.88
13 15 1 8.4e+03 -3.2 5.5 10 19 850 860 847 860 0.73
14 15 1.2e-06 0.0099 15.8 13.7 1 16 896 911 896 921 0.91
15 15 1.2e-06 0.0098 15.8 14.0 1 19 928 947 928 947 0.97

Sequence Information

Coding Sequence
ATGGCTACTTGGGATGGGTCATACCAAGAACCAGATGGATCTCCTTATTATGTCAATTCCAATAGTAATCAGACATCAACTAGTATTCCCACATGGGATTATTACATCTCACATGCAAATAATACATATGCACAAAATACAACTACTGCATACCCGATAGAACATACTATGACCTTTGATAGAAGCAGTCCCAGCTTTTATAATTCTGTTGACACAAATGTCATCCCTTCAATGATGCCAAATATTACACCAAGTACAAATGTTTATTCTAATAATGAAGTTACAGTTGCTGCCAATGAAAATTCATCAAGATCTTCTGAACCCTATTTCAATAATAGTAATCAATTACCATGTTTCTATGAAGATAATAGAAAAGTATCTCATCAATcttattatcataataaaattaatcactTCCCAGCTAATAAACGTAAAGATAATAAGAATTACTATACATCTGACTTAGTTGAACATTCAAATCTACAAGCTACTGCTACTGAGTTTGTACCAAATCAAAAGACACAAGAGCATAGAAATCtcacaaatttaaataaaagtaataataaaggTAGATTGAATAAAGATAATAGAAATCAAGATTTAGTTCAAACAGCGCAAACTGTGTATGATGATAGagtaaaatataacgataagaaatttgaaagtaaaagagaCACTGGAAGAAAGTGGAGGGATACACAAAATGgacaatttttgaaagatgataaaaaagaatatggGAGGAATCAAAATTCTAAGAGATCCCAAAATGATCGTTATAACTATAATAGAAACTATATCGATAAATTACGGAACActcgttttgaaaaaaatgaaatagaaagtATTCATTCTGAAACAATTATCGAtagtgaaatagaaaaatccataagtataattcaaaatggcagtaatagtaataataaatccCATCCTCCTGTTGAAGTTGATAATGCACAATCTACAAGTAACCAGTCTGTTAGAAATTCAAAACTATTTTCCAACAATAGCAGAGGAGATAGATATTATGATAGGAAAGAACGCTATAATCCTAGAGATCCTAGAGACAGAAGAAGTAACTACCCAGAGCATAATGGATATAGTAGGAATAATTACAATAgagataataaatatgaaaaaagaacatacAGAGAAAATACAGATAAAGAAATAACTCATTGGCGTATTAGAAAGGatgattcaataaataaatctttatcaAAACGTCCATATCACAAAAAATATGAGCCAGatgaTGCTGCAAGTCAAAGAGAAAGATTGACAGAGCTATTGAATCGTGGACAACTTGAATGTTTAGTATGCTGCGAATATATTAGGCAACAGGATTATGTCTGGTCATGCAAAAATTGTTACCATGTACTCCATTTAAAATGTGTTCAAATGTGGGCAACTTCATCGGTAGCTGAGAGTGGTTGGCGTTGTCCTGCTTGTCAAAATGTCACTAGCGACATACCAACAGACTACGAATGTTTTTGTGGAAAAACAAGGACCCCAGAATGGAATCGACCAGATATTGCTCATTCATGTGGTGAGATTTGTGGTCGATCTCGTGCTGACAATAACTGCATTCACAAATGCACGTTGCTCTGTCATCCTGGTTGTTGTCCACCTTGCGACGCAATGGTCACCAAATCGTGTGGTTGTGGTAGAATGTCCCAAACGCAGAAATGTAGTACCGACACTCTTCTTGTATGTGAAGATATTTGTGGTCGTATACTTAATTGTGGTGTGCACCATTGCGAGAAGGCATGTCACCATGATAGCTGTGAGCTCTGTGATCAAACTATTAAACAAGAATGTTTTTGTGGAAAGCACACTCGGGAACAAATTTGCGTTTTTGACTTATCGCCTTTGTATtcttgtgaaaatatttgcgCAAAAATGCTAGACTGTGGCAATCATAAGTGTCAGGATAATTGCCACGCGGGTGAATGCGGACCATGCTTATTAAAACCCGGACTTGTCACGCATTGCTGTTGTGGACAATCACTCTTGACTGTTGAGAGAAAAAGTTGTTTAGATCCAATCCCAACTTGTGATAAACTTTGTTCCAAACGGTTGAAATGTGGACAACCAAGCAACCCTCATATCTGCCAAGCGAATTGCCATGAAAATGATTGCCCAGAATGCGAGCTGTTTACGAAAGTTAAATGTCGTTGTGGCCACATGGATAAAGAGATCCCTTGTAAAGAGCTTACCACGAAGGCAGACGATGCGCTTTGTGAAAAGAAATGCATAAAGAAACGCTCTTGTGGCAAACACAAATGCAACCAGATGTGTTGTATCGATATTGAACACATATGTATGATTCCATGTTTAAAGACTTTGAGTTGTGGTAAACATAGATGTGAACAAACTTGTCATAGAGGCAGATGTCAGTCTTGCTGGCATAGCAGTTTTGATGAGTTGTACTGTGAGTGCCGTAACGAAGTGATTTATCCTCCAGTGCCATGTGGCACACGTCCCCCTATCTGCAAGAGGCCATGTACTCGCGAACATCCTTGTAATCACGAGGTATTGCACAACTGCCACAGCGATCCCCTCTGTCCTCCTTGCACTGTTCTCACGAAGAAATGGTGTTACGGTGGACACGAGCTGCGTAAATCAGTACCCTGCTATATGAATGAGGTTTCTTGCGGACTGCCTTGTAGTAAACCCATCTCTTGCGGTAAACACACGTGTATACAGATGTGCCATTCAGGAGCTTGCGAGAAACCTGGTCAGATCTGTGTGCAACCGTGTGTTGTGCCAAGAGAGCTCTGCGGACATTCGTGTGCGGCTCCTTGCCATGAAGGCAAATGTCCTGATGTACCTTGTAAGGAATCGGTCAAGGTCACATGCCAATGTGGTAACAGGACAATGTCTCGTGTGTGTGCGGAAAATTCACGAGACTACCAGAGAATAGCCAGTGGAATATTAGCAAGTAAAATGGCTGAGATGCAACTGGGACACGCAGTCGATCTCGAAGAAGTTTTCGGCCAAGGCGCCAAGAAGCAAAACCAGCTCAAAACTTTAGAGTGCAATGAggaatgtaaaataatagaGAGAAATCGCAAATTAGTGGTTGGATTGCAAATCGCTAGTCCCGACTTGAGTGGTAAATTGTTGCCGAAATACAGTGATCACATGAAACAGTTCGGCAAAAAGGATCCTACATTCTGTCAAATGGTACATGACAAACTCACTGATCTTGTACAATTGGCTAAAAGTTCCAAGCAGAAGTCTCGAAGTTACTCGTTTGACAATATGAGCAGAGAGAAAAGGCAATTCATTCATCAATCTTGCGAGCATTTTGGTTGTGAGAGCAAAGCATACGATCAGGAACCGAAGCGCAATGTTGTAGTTACCGCCGTAAAAGATAAGTGTTGGCTACCAAGTTACAGTTTACTAGAATTATTACAAAGGGAAAACGGCCAACGAAAAGTCCCAGGGCCAATGCTCAATAAATCAATGCTCAATAGTGGTGAAAGGAGCAAAGATGTTTTGCAACTGAACTCTAAGAAGAATCTAAAGTCGCTGCCTACGACTTCGGCCTCGCCATCAAAATCTCCTGAACCAGAtatagattattttaattacaaggGATAA
Protein Sequence
MATWDGSYQEPDGSPYYVNSNSNQTSTSIPTWDYYISHANNTYAQNTTTAYPIEHTMTFDRSSPSFYNSVDTNVIPSMMPNITPSTNVYSNNEVTVAANENSSRSSEPYFNNSNQLPCFYEDNRKVSHQSYYHNKINHFPANKRKDNKNYYTSDLVEHSNLQATATEFVPNQKTQEHRNLTNLNKSNNKGRLNKDNRNQDLVQTAQTVYDDRVKYNDKKFESKRDTGRKWRDTQNGQFLKDDKKEYGRNQNSKRSQNDRYNYNRNYIDKLRNTRFEKNEIESIHSETIIDSEIEKSISIIQNGSNSNNKSHPPVEVDNAQSTSNQSVRNSKLFSNNSRGDRYYDRKERYNPRDPRDRRSNYPEHNGYSRNNYNRDNKYEKRTYRENTDKEITHWRIRKDDSINKSLSKRPYHKKYEPDDAASQRERLTELLNRGQLECLVCCEYIRQQDYVWSCKNCYHVLHLKCVQMWATSSVAESGWRCPACQNVTSDIPTDYECFCGKTRTPEWNRPDIAHSCGEICGRSRADNNCIHKCTLLCHPGCCPPCDAMVTKSCGCGRMSQTQKCSTDTLLVCEDICGRILNCGVHHCEKACHHDSCELCDQTIKQECFCGKHTREQICVFDLSPLYSCENICAKMLDCGNHKCQDNCHAGECGPCLLKPGLVTHCCCGQSLLTVERKSCLDPIPTCDKLCSKRLKCGQPSNPHICQANCHENDCPECELFTKVKCRCGHMDKEIPCKELTTKADDALCEKKCIKKRSCGKHKCNQMCCIDIEHICMIPCLKTLSCGKHRCEQTCHRGRCQSCWHSSFDELYCECRNEVIYPPVPCGTRPPICKRPCTREHPCNHEVLHNCHSDPLCPPCTVLTKKWCYGGHELRKSVPCYMNEVSCGLPCSKPISCGKHTCIQMCHSGACEKPGQICVQPCVVPRELCGHSCAAPCHEGKCPDVPCKESVKVTCQCGNRTMSRVCAENSRDYQRIASGILASKMAEMQLGHAVDLEEVFGQGAKKQNQLKTLECNEECKIIERNRKLVVGLQIASPDLSGKLLPKYSDHMKQFGKKDPTFCQMVHDKLTDLVQLAKSSKQKSRSYSFDNMSREKRQFIHQSCEHFGCESKAYDQEPKRNVVVTAVKDKCWLPSYSLLELLQRENGQRKVPGPMLNKSMLNSGERSKDVLQLNSKKNLKSLPTTSASPSKSPEPDIDYFNYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00735165;
90% Identity
-
80% Identity
-