Basic Information

Insect: Frieseomelitta varia
Gene Symbol: -
Assembly: GCA_011392965.1
Location: WNWW01000535.1:415146-421969[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.7 3.5e+03 -2.7 0.1 13 22 11 20 8 21 0.77

2 19 4.2 8.5e+03 -3.9 7.9 11 43 241 268 234 269 0.77

3 19 1 2.1e+03 -1.9 0.3 15 39 387 408 383 411 0.64

4 19 0.46 9.3e+02 -0.8 0.9 18 38 469 486 465 486 0.81

5 19 0.23 4.7e+02 0.1 2.3 14 27 498 511 492 525 0.70

6 19 1.3 2.7e+03 -2.3 1.0 12 29 524 541 511 559 0.67

7 19 2.8 5.7e+03 -3.4 0.0 13 27 593 607 590 614 0.75

8 19 2.2 4.4e+03 -3.0 0.1 15 28 623 636 615 639 0.76

9 19 1.1e-07 0.00021 20.4 0.4 14 44 687 714 682 714 0.91

10 19 0.16 3.2e+02 0.6 1.2 17 30 720 735 715 752 0.75

11 19 1.8 3.6e+03 -2.7 0.2 13 25 747 759 737 760 0.74

12 19 0.092 1.9e+02 1.4 0.3 18 28 784 794 783 801 0.82

13 19 0.0025 5.1 6.4 0.1 12 43 849 877 840 878 0.85

14 19 0.91 1.8e+03 -1.8 0.0 18 27 893 902 888 912 0.79

15 19 0.0027 5.6 6.3 0.4 15 36 926 944 918 951 0.77

16 19 0.027 56 3.1 0.8 15 29 970 984 963 995 0.78

17 19 0.55 1.1e+03 -1.1 0.2 14 28 1043 1057 1037 1070 0.81

18 19 9.7e-06 0.02 14.1 0.1 11 44 1091 1121 1087 1121 0.90

19 19 0.7 1.4e+03 -1.4 1.3 17 26 1156 1165 1145 1180 0.62

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.7	3.5e+03	-2.7	0.1	13	22	11	20	8	21	0.77
2	19	4.2	8.5e+03	-3.9	7.9	11	43	241	268	234	269	0.77
3	19	1	2.1e+03	-1.9	0.3	15	39	387	408	383	411	0.64
4	19	0.46	9.3e+02	-0.8	0.9	18	38	469	486	465	486	0.81
5	19	0.23	4.7e+02	0.1	2.3	14	27	498	511	492	525	0.70
6	19	1.3	2.7e+03	-2.3	1.0	12	29	524	541	511	559	0.67
7	19	2.8	5.7e+03	-3.4	0.0	13	27	593	607	590	614	0.75
8	19	2.2	4.4e+03	-3.0	0.1	15	28	623	636	615	639	0.76
9	19	1.1e-07	0.00021	20.4	0.4	14	44	687	714	682	714	0.91
10	19	0.16	3.2e+02	0.6	1.2	17	30	720	735	715	752	0.75
11	19	1.8	3.6e+03	-2.7	0.2	13	25	747	759	737	760	0.74
12	19	0.092	1.9e+02	1.4	0.3	18	28	784	794	783	801	0.82
13	19	0.0025	5.1	6.4	0.1	12	43	849	877	840	878	0.85
14	19	0.91	1.8e+03	-1.8	0.0	18	27	893	902	888	912	0.79
15	19	0.0027	5.6	6.3	0.4	15	36	926	944	918	951	0.77
16	19	0.027	56	3.1	0.8	15	29	970	984	963	995	0.78
17	19	0.55	1.1e+03	-1.1	0.2	14	28	1043	1057	1037	1070	0.81
18	19	9.7e-06	0.02	14.1	0.1	11	44	1091	1121	1087	1121	0.90
19	19	0.7	1.4e+03	-1.4	1.3	17	26	1156	1165	1145	1180	0.62

Sequence Information

Coding Sequence: ATGTCCACGATGGACGAGGTGGTGGAGTTGCAAGATATGGAAAACGTGTGCAGGCTCTGTTTATCCACCGACGAGCCAAAATTGTCGGTGTTCGAAACGGAAGACTCTCTGTTGTCGATGGCTAGCAAGATACAAGCTTGCCTATCGATTCAGATTTCAACGACAGACAAATTGTCAACACAGATATGCGCACAATgtgttaaaaatgtaaatcaatGGCACAGTTACAAAGAAACCTGTTTAAGTTCACAAGAGAAGTTGCATCAATGGCTGGAACGGCAGCATATGCAACAAAGTCCTATGGTTGTAACCATCAAGGATGAACCTGTTGATCTGGACTTTTATGAAGACAACATCGAAATCATTTCTGAATCTACCACTGATTCAAATTTGGAAGTCACTAATCTTGAAGAGAATACGAATCACTTAGAAGATAGTGCTCAGAAAGTAACTGATGGTGATGAAGTAGCTGTAGATGAAGATCAACCAGTCTTGATGAAAGacgtaaatatttctataaaaccTGAACTACAAGATGATTATGATACTGATTGTACTATAGAAATAGAATCGGTTACTGGTAATGAACTTGTCGCAAATCCTCTTGCAAGCTCAGAGGAGAGAATCATGGAAGCTGATTCCACTCAGAAATCCAATGCATCTGCCTCAGCAAACAAGAAAAAAGCCAGAAGAGGTCCTCATACTCACTTTAGGGGTGCACGTATTTTTAAACAGAAGTGTGTACATTGtcaaattaatttgcattCTAAGCATTCTTATGCAAAGCATATGCAAAGATTTCACACTGACAAACAGAATGGCAGTGTCAATAAACCGGAATTAAAAGATGAGGAAGAGCTTGTCGAAGATCTGGAGGATGAATTAATGAGTATGGAAAAGGATGCTCCGTTAACACAAGTGCAGCAAAATATTATTGGACAATTGAAGACATTTTCATGCTACTCCTGTCAACAAAGCTTCAGCGATCGCAGAAGCACGCTTTTCCATATTCGTCAGCATATGCCCGACTTGAGACCACACACGTGTATCGCGTGTTTGACAGAGTTCCCAGATCGATCAATGTATAAGTTACATTGCGGAGCGTCGTTTGAATGTGCAATGAAAATCGCCCTTGTTGTACCGAAACAAGGCGAAGAAAAATACTTCACGTGTAATATGTGTTTACGTCCTATGCAAAACAGGAAACAATTGCTTAGCCATTTGTCAAAACATTCGGATAAACAGTACGAACAACTGGTATCCCCGACACGATTTCCTCCTAAATTGAAACCAGTGACTCCTCTTCCACCCTTGAAGCAAGAATCACGAAAAAGAGCGTCcgaagaaaattatactttaaacaTACCCAATCCTTATAAAAATGGCGATCCTGCGCATAATCATATATGTGACTTGTGTGGTATGATTTACAGATATAAGCCAAATATGCTGAGGCACAGGGATTTATGTCTACGTTTGTCATCAGATGTTAGGACATCCTACAGATGTGTTCACTGTGGCATGACATATCTGgtattcaaaaaattccattCTCATATTACACAGGAgcataaaaagaaagatctcATATGTTCTGAATGTGGCAGCAAATTCAAATCTCCTAGTAATTATTTGGAACATCGCGAGGGACATCGTATCAATCGTGCGAAAAAACACTCTCTTGATCCGAAAAGCGATTTAACGAAGATCCCGCAgaacatttcaaataaagaCTGGGACACATTTGAGGCTGAAGTAAATGCTAAAAAACTGTCCGACAGTAATCAGTACAGCTGTGCTCTCTGCAATTTGGAATTTACTACCAGAGCCGAGTTAACAGAACACAGAAATCTACATCTAAAAGTGAAGATTTATTCTTGCGTCATCTGTCGTAGCATGTTCAGCAGCGCAGGTGCTTTGGAAATTCACATGAAGGATCATGGCATAGAAGATCCGAATGAAAGAAATGCAAACAGCTCCTGCTTAGAGTATGGTACGGTGGAAGAAGAATCAAAAGATTCAAACTCAATGAACGTAAGTGCCACTTCGGATCCTGGTGATAAGAAAAACGAGTGTAATACGTGTggcaaaatattctcaaatagCGCAAATCTTAAAAGACATATAAGAAATCTCCACAACGTTACCAGAGGCCACCTCAGCTGTTCCTACTGTTGGCGAACATTCAAGAGCAAAGAAACACACGACCGGCACGTTACAATCGATCATCTAAAATCCTCAAAATCCATGCTTCGATGTTCTCGATGTCCAAAGACTTTCTTCTTCCAAGCCAATCTGAATCTTCATTTTGAGACTACGCATGCCGAGAAATCATTTCCAGTTGGCCACAAATGCGATATTTGCGGTAAAACTTTCATGGAAGAAACATCTCTGAAAATACACAGGAGCTGGCACAATCGAGCAAACTCTAGACTGAGCTTGTACTTCATGAAGAAAGAAGATCCAAAACAGGAGGAACCTTTGAATTCTAATACAACCCGGCCAGCGAGAGCGCGAAAATCTTACCCGAATTCACCTTCAACAAAACCTAATGGTAATTTCCAATGTCAAGTCTGCAGCGAAAAGTTCAATGATGTAACAGAACTGAGGACACACTTATGGGACGTACACTGTGCACGCagcaaaaatgagaaaaatttcccTGATGGCGAGTTCAATTGTGAACTTTGCATGAATGTTTTCCCAGATAAGGAAACGTTGGATATGCATTTGCAATGGCATAAAGCTCAACCAATTCTCAACGATATAACAAAATCTGATTACACGTGTGACATTTGTGGGAAATCATACAGCTCGAAGAAGATACTGTCCAGACACAAGAAGCTTCACAAATCCACAATTGCAGCTGCTGCGAAGTTGCAATCAGCTGGCAAAAACTTAGCTAGCAGTCAAGCTTCATGCACCGTTTGTCACAAGGTGTTTAACAATAATCGCTTGCTCCAGTGTCATAGACTGAACGTGCATTCAAACATATTCAACCAACAATCTCAACAGGTACAAAACAACAAAAGAAGATCATCTCAGGAAGAGCCAAGAgctaaaagaataaaattagagCAAGAGGACAGGCAAACACCTTCTGCCATGGATGCTATGAGCGCGGGAAAAAAATCCGTCATGTGCCACGTTTGTAGGAAATTCTTCGCAAACATGAGCGTGCTTTATAAGCACAAACAGTTGGTACACAAAACTCATGCGAATCtggtaaaaaatttctctaaatCATACCAAATGGAATGCATACCGTTGCCCAGCAACGATGGCAAAGTCTCTTGTAACGTTTGTTACAAAAAATTCCCTGGCGTGTCGAATTTGCGTCAGCACTTTACTGTAAAACACAAGAATGCCCCTGTCAAGTATGCTTGTACTGTAGATGGATGCAAACTCACATTTCCTACACCGATGATCCTAAAGAACCACGAAATGTCGCACACCAGCATCATCTTCAGTTGCAACTTATGTAACAGGCATGTGTTCAACAGGCCTGCGATGTCGAATCACATACTGACGGTACACAACATCGTCTACAACGCTGAGAACAGCAAAAACTTCCACAGAGAGCTGGATTTGGGCAAATACGTGGTAGAGGGTGCAGTAGATGCTACCTGTCCTCAATGCAAGATCAAGTATCCCAACAACAGGGCTATGAAGATTCACTACTTCAAGTATCACGAGAACCCAAACGAATAG
Protein Sequence: MSTMDEVVELQDMENVCRLCLSTDEPKLSVFETEDSLLSMASKIQACLSIQISTTDKLSTQICAQCVKNVNQWHSYKETCLSSQEKLHQWLERQHMQQSPMVVTIKDEPVDLDFYEDNIEIISESTTDSNLEVTNLEENTNHLEDSAQKVTDGDEVAVDEDQPVLMKDVNISIKPELQDDYDTDCTIEIESVTGNELVANPLASSEERIMEADSTQKSNASASANKKKARRGPHTHFRGARIFKQKCVHCQINLHSKHSYAKHMQRFHTDKQNGSVNKPELKDEEELVEDLEDELMSMEKDAPLTQVQQNIIGQLKTFSCYSCQQSFSDRRSTLFHIRQHMPDLRPHTCIACLTEFPDRSMYKLHCGASFECAMKIALVVPKQGEEKYFTCNMCLRPMQNRKQLLSHLSKHSDKQYEQLVSPTRFPPKLKPVTPLPPLKQESRKRASEENYTLNIPNPYKNGDPAHNHICDLCGMIYRYKPNMLRHRDLCLRLSSDVRTSYRCVHCGMTYLVFKKFHSHITQEHKKKDLICSECGSKFKSPSNYLEHREGHRINRAKKHSLDPKSDLTKIPQNISNKDWDTFEAEVNAKKLSDSNQYSCALCNLEFTTRAELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANSSCLEYGTVEEESKDSNSMNVSATSDPGDKKNECNTCGKIFSNSANLKRHIRNLHNVTRGHLSCSYCWRTFKSKETHDRHVTIDHLKSSKSMLRCSRCPKTFFFQANLNLHFETTHAEKSFPVGHKCDICGKTFMEETSLKIHRSWHNRANSRLSLYFMKKEDPKQEEPLNSNTTRPARARKSYPNSPSTKPNGNFQCQVCSEKFNDVTELRTHLWDVHCARSKNEKNFPDGEFNCELCMNVFPDKETLDMHLQWHKAQPILNDITKSDYTCDICGKSYSSKKILSRHKKLHKSTIAAAAKLQSAGKNLASSQASCTVCHKVFNNNRLLQCHRLNVHSNIFNQQSQQVQNNKRRSSQEEPRAKRIKLEQEDRQTPSAMDAMSAGKKSVMCHVCRKFFANMSVLYKHKQLVHKTHANLVKNFSKSYQMECIPLPSNDGKVSCNVCYKKFPGVSNLRQHFTVKHKNAPVKYACTVDGCKLTFPTPMILKNHEMSHTSIIFSCNLCNRHVFNRPAMSNHILTVHNIVYNAENSKNFHRELDLGKYVVEGAVDATCPQCKIKYPNNRAMKIHYFKYHENPNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01417894;
90% Identity: iTF_01417839;
80% Identity: iTF_00734106;