Fvar004660.1
Basic Information
- Insect
- Frieseomelitta varia
- Gene Symbol
- dmd-4
- Assembly
- GCA_011392965.1
- Location
- WNWW01000555.1:39890-43877[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-25 4.6e-22 76.8 10.7 1 47 184 230 184 230 0.99 2 2 0.14 4.9e+02 -0.1 0.3 2 9 508 515 507 517 0.84
Sequence Information
- Coding Sequence
- atgttCACCACCCATTGTATACAAACTCACATTCTCGTTTTGTCACACAGAAGTAGCATCGAAGCTTTTAGATCAGCCCAACCCTGTtgggacactctgtataaaaGCTGGAGGGCACGTCGGCTGTGCAGGATGGGACATTTCGTTACTATTCGTATCCGGGAAGTATCAGCGGATCTCAGCAAAATCACGAAGGCTCTCGATGACCGAGTAGGAGTGGCAGAAGAGAATAAACATCGGCGGGCCAATCGTGAAGAAAGGGTGGTCCGGTGGATGTTTGTCTTGTTGCTCCTCCGGAGGGATGCTGGAATCGCTGCAGAGATAGGGAACATGTGCGGAGCCAATCGCGCGGCACCACGAAAACATCTAAATGTTGCCGAAGATTACAGCGAGATTTCTTTCACCCGGCTGGTCACTCAGTCGTCTATTAACAATCGCCCTGAGACTCCAGTTAGTTTGCAATTTGCACTGGGTGATCAGAAGACTATGTTACGTGGAAAGAGTAAAAGTAAAGTGGAgaacgaggaggaagaaggTGAGCTGAAGCAGAGGAGGCCAAAGTGTGCTCGTTGTAGAAATCATGGCTTGATTTCTTGGCTGAGGGGCCACAAACGAGAATGTCGTTACAGAGAGTGTCTTTGTCCAAAGTGTTCTTTGATCGCGGAGAGACAAAGAGTGATGGCCGCTCAGGTGGCCCTTAAAAGGCAACAGGCTGCCGAAGACGCCATTGCCTTGAAAATGGCGAAAGTAGCGACTGGACAGAAACTCAATCGACTTCCGCCGGGAAAAATATTTGGGATGGCAGTAACCGAGCCAAAATCAGCTGTAGACGCTAACAAAAGAGAAGATCCTGCTCCTAAAGAGAACGTAGAATCCGAAGACTCAAAGAAAGACAACCAATGTCAGGATTCTTCAACGATCAACGAGAGTGCGCCGAAGTACAAGAGCCTGGTATTCAACGTGAACAATCCGGAGGAAACAAAAGAGAGCAGCGTGTCGCAAACTTCGGTGGAAACACTAGCTCGCCTCTTTCCTAACACGAAGCTCTCGGTGCTGCAACTGGTGTTGCAAAGATGCGGCCAGGACCTGTTGAAGGCTATCGAATACTTCGCCAGCGACAGTTTTGGAATCAACTCGACCGCTTACTCCTCAGCTTTTCGACCCCCGCAAAGTATCAATGAGACCAGATCCAACGAACAGATCGCCGGCACTATGCTGGCTCCAATTTACTCCAGTCTGTCCAGGAACTTGTACGGGGACGGCTACTGCTTGTTGAACATTGTTCCTGATCAGTTTCCAAAAAGTATAATAGATACCACGACCTGCACCACGTTACCCATAAAAAATACCGGGCAACACGAGCAAGAGGGAGTAGCTCTGAATGTtcagtataataattacttcaaTTCTGGCGTGCAGCAACAGTTGAGAGATCACGTGTACGCTCAGGTTACGGATCACCTTTCCCCAAGGCCCGGTTTCCTTCATTTACCGCCAGTGCTACCGGGGATCCCCTGCGTACAGCCCAATTGCGCCCAGTGTAGTTACAAATTTCCTTAA
- Protein Sequence
- MFTTHCIQTHILVLSHRSSIEAFRSAQPCWDTLYKSWRARRLCRMGHFVTIRIREVSADLSKITKALDDRVGVAEENKHRRANREERVVRWMFVLLLLRRDAGIAAEIGNMCGANRAAPRKHLNVAEDYSEISFTRLVTQSSINNRPETPVSLQFALGDQKTMLRGKSKSKVENEEEEGELKQRRPKCARCRNHGLISWLRGHKRECRYRECLCPKCSLIAERQRVMAAQVALKRQQAAEDAIALKMAKVATGQKLNRLPPGKIFGMAVTEPKSAVDANKREDPAPKENVESEDSKKDNQCQDSSTINESAPKYKSLVFNVNNPEETKESSVSQTSVETLARLFPNTKLSVLQLVLQRCGQDLLKAIEYFASDSFGINSTAYSSAFRPPQSINETRSNEQIAGTMLAPIYSSLSRNLYGDGYCLLNIVPDQFPKSIIDTTTCTTLPIKNTGQHEQEGVALNVQYNNYFNSGVQQQLRDHVYAQVTDHLSPRPGFLHLPPVLPGIPCVQPNCAQCSYKFP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01419662;
- 90% Identity
- iTF_01419662;
- 80% Identity
- -