Fvar008273.1
Basic Information
- Insect
- Frieseomelitta varia
- Gene Symbol
- dmrt1
- Assembly
- GCA_011392965.1
- Location
- WNWW01000912.1:374621-375061[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-26 6e-23 79.7 11.2 1 47 20 66 20 66 0.99 2 2 1.5 5.2e+03 -3.4 0.1 3 10 107 114 106 119 0.64
Sequence Information
- Coding Sequence
- atgaagacTGAAAGTGGTAATTCGAGTCAAATTAACTCCGGAATCGAGCAACGTTTGAGAAGTCCAAAGTGTGCTAGATGTAGGAACCACGGTGTGATTTCCGGATTGAAGGGTCACAAAAGATCGTGTGCGTGGAAGGATTGTCGTTGTCCTTGCTGTTTGCTGGTGGTCGAGAGACAACGGGTGATGGCAGCTCAAGTTGCACTCAGAAGACAACAGCAGGCTCAAGGAAATTTCTTCGGCGAAAACGTCTCGACTGTTTGTCACACACCAATTGATACAGCTGGTTCGTCATACTTACTAAAAACAGATCAACCACCAATTTGTCGAAGAGGGAAAAATATTCAGCGTCATCAATTACACTTTACGCAAACCAGCATTAGTGTGACCCAGGGATTCTATGGATTGAAGACGATTCACGGTTTACCTGCAGCATGTTAG
- Protein Sequence
- MKTESGNSSQINSGIEQRLRSPKCARCRNHGVISGLKGHKRSCAWKDCRCPCCLLVVERQRVMAAQVALRRQQQAQGNFFGENVSTVCHTPIDTAGSSYLLKTDQPPICRRGKNIQRHQLHFTQTSISVTQGFYGLKTIHGLPAAC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -