Basic Information

Insect: Frieseomelitta varia
Gene Symbol: JARID2
Assembly: GCA_011392965.1
Location: WNWW01000924.1:276781-283574[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.5e-23 9.4e-20 70.0 0.0 6 89 1346 1427 1342 1427 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.5e-23	9.4e-20	70.0	0.0	6	89	1346	1427	1342	1427	0.94

Sequence Information

Coding Sequence: atggtgTTAAGTcgaaatgataaaagaaaaagaaaagaaggagatTTGGTAGATCTTATGGAGCCACTCTCAGAATCTCCAAAAAgGACAAAAGTGCATGcacaaagaaaatttgcaCAAGGTGCAACAACAGTTTTCAATCCTTCACATACTCCTATTAAggataaagaaaaaactaaaCCAGCAGTTATAACAGAATTAATAACTCACAAACGACCAAATACAGAAGATTTCCTGACATTTTTGTGCTTTAGAgGAACATCAATTTTACCTCCAagcttaaattttttcaatgttggaagtaaaaaagaaaaacttgatAATAAGCCAACACATACAGTAACAGataaaattgtatcaattAATATACCTACTGAAGATCAAAAATCAGATTCAATTCAAAAAACTATTGTAACCAAAGTGAAACCTGTTATTACTGATAAGAAGAAAGTCCCAAATacaattcagaaaaatattacaacatttaAAAGTACTACATCTACAGTACAAGctcttaaaaagaaataccaAGAACAACGTCTTGCTAAACaaagaatcaaaaataaatttaaaacatcatGTGTTATGAGAACAAGATCTTGTACAGaacaaacattattaaaatctgtAAACAAATTAGCACCCAGAAAATTTTTGCCAAGAATTGAAACTAAGAGACTTGGTTTACGAAGCAGTGTGCTTGCAGACAAAACAAAGAAAGCTTCTTCAAAAGTTAAACCTGTAGCATCTAAACCTAAGAAGAAAGTTAtagtaaaacaaaagaacAGTGATACATCAAATTCAGAATCTACAtctgaagaagaagaagaagaagaaggtcCTTCAGAAAAATCAACACCACAGATGAAACGTACAATTCAAAAGACTGTTCAGAAAAACATATGTACAAGAAGTAAATCTGAAATGAGAAGAATCACACGGTCTCATAGTGGCACAATTTCTCCAAAAAATCTTTGTAGAAGACCAACAAGAAAAACTAAAGAAGCAGCTGCAGTATACATGGAAATTCTTGGAAGGAAACTTGTAAGCCCAGATttagaaaatgataatatttctatagacAGTTTTCCAGAATTACCAAATACACGTAAAACTACTCAAGCAGAAAatgaagttaaaattaaagtaaaacaaCCTGTTACAAAAGCAACTACTAAAAACAAAGATGGTAAAATTACTTCTATTCATAGTACATCCAATAAACGATTAGATAAAACAAAgactaataaaattgattttaaaagtaaaagattAATAAGAGTTCACAAGTATTGTGAAATTGATACTGATGAAGAGTCTGTAAGTTCTAATGAAACTAGTAACATAAGACCTGTTACAAGAAGAAGCttaggaaaattaaataaacctGttcaacataatataaaatttaataaagaaaaatttgtaatgaaaCGTAAACGAGAACAGAGTTCTAAGTCATTACTTGAAAAAGATAATAGATTaaagcaaaaagaaataaagaatactATTGCTGAAAATACAGATTCTGATGAAGAAACATTAGGAATGTTgctcaataaattaaaaaagaagaaagatgataatgaacaaaaagagattattaataaaaatagtaatcaTGATGttgaagataaaattaaacaatctgTAAATGAAGATGTTGTAAAAACcgatctttcaaaaatatcagatGATGAGGAATCTTTTCGGGGATTTACAAAAAAAGCAATATCCAAAGTATTAAATTCTTGCCAAACACATGTTAACGTTAATCTTTTGACTGCGAAAAAGACCAATGATAAGTTAGAAACAGCTAAAATGGAAGATGGACAAAGTACAGATGTAACTAAACATGTAGATAAGGAATTATCAAGTAATAAACCTTTACTAAGTATAAATTCTTCATCTGTTCCAAATATATTAGAGAATCAACATCTTCAAAAATCTGAAAAGGATAAATCAGAGTTATCtgatgaaatagaaaaagaaatatcggcAAAAGACATTAAAAACGAATGTCAtcataaaactgaaatttcttcCACGAATGTTATAGATATGTCTTTATCAACATTGCAtgtaagaaaggaaaaagtaaatatGTCAActgaacaaattgaaaaatggttAACTGAAAGTTCACTTGCTAAAGAAGAAAGCAAGTTAGAAATGGAAAATGTATCTACTTTTAAATATGACATATGTGAAAAAAAGACTGATGTGTCacatttatcaatttcaacaaaaattcagCATTTGGTAAGACCAGTCAATGTCACACTTTCTAAATTAGCAGAAAAGGCTAGTGTAAAAGATCGTGTgagtacatataataaatatgtacctGTTATAGCAGGAGAATTACAGCCTGATATGAAACAACAAAATGAGttttctaatactaatattaatacctttattaataaacagagcacaaatttaaaagatattaataaaggACGAAGTATAAACTTAAATAAAGATTCATGTCCTGGAGAAGAAGGTGATAGTACATTGAAATCAGATCAAAATTCGATAGATACTTCTAGTGAGAAAAAGATAccaatagaaaagaaaactataTTTCAACCAAGAAAACCATTTTTACCAAAAGTTAAGGAACGTAAAACAGTAACTCCTAATGCAAATGCTTTTTCTCCAGAAAATGAAAGCAGTGTTTATGCATTCGAAAGTGATACTGAAATTCCTGTTAATACCCCTTTTAGGCGTAAAGCTCGAGACTCAAATAAACCAAACGTACTTCGTAATTTATCCGAAACTGATgcagataaaattaaaaataatgcaaataaatctgagaataatacaaataaatccaaaaataacataaatatgtCTGTGAAtgaagcaaataaaaatatagaaagaacAATCAAagataattgtgaaataacAACATCAAAAGAAATTCCTAACAGTTCTTCAAAGAATGAGAGTGaagtaatagaaataaaaagcaTATCAAATTCAACATTAAATGTGAACAAATTTGAATTACCAAAAAATTTTGCTACTTTGGCTAATATACAAGTTCTACCATTAGATAAATTAACAACAACATGGAGTAATGTAAATTGTAGTACTTCAATAGCTGTACAAGTAAATCTTGATGATAATGCACAAACGCaaaaacaaattgaagaaGGAGATGTAAATCAACAAAAGAGTACAGAAATATCTACTCAAACTGAAAACAGCAATGAAAATGATGATGAGAATGATGGtcaactattttatatacctTTACAAGCTGTCACAAGGAATGGACCGAATTTAGTTCAGGGACAGCAATTAATTCAAGGTGTAGCTGTAAAGCTTGGTACTGAAGGACCAAATGGTCCTAATCAAAAAGTTCTTTTAAGAGCAAAATTGGTTACAAAACCGCCATCAACAATTGCACGTTGTCCTCCTGTAGGCACAGTACAACCTACAACTCGTACACCACCTAATTCTACACTTATAACAACTGATCATTCAGTACCATCTACTTCTTCAAATACAGCATCAATTGTTACCACATCTAATTCTGAACCTCAACCATCTACTCCaactaaaaatgaaaatatagcGCAAACtgcaaataaacaaaatataggAACTGCATTAAATATAGGAATTGAAAAACTACAAAAGTCTCCAAAAAATtctagagaaagaaaaacctCAATTGACTCAAGTAAGAATGGGAAAAGatGTCAGatcaaaacaaaacaaaaaagttctgaaatttattctcCTACTAATAATGTAACGTTTCCAAGtgcaaaaagtgaaaatattgaagCACGACTAGTTGAGGCTCCAACATTTCATCCTACTGAGAAAGATTTTCAAGATCCTTTAGAATACATAGACAAAATAAGGCCAATTGCAGAAAAATTTGGCATATGTAGAGTTGTACCACCACCTAATTTTAAAccTGAATGCAAAGTATCAGATGATATGCGGTTTACTGCTTACAATCAATATGTACATCGTATGTTACATAGATGGGGCCCTAATGTAAAGGAAATGATggctataaaaaaatatttagctaCACAAAGCATAACATTAACTCATCCACCTTGGattggTGGTATGGAAGTTGATCTACCCCATTTATATCAAACAGTTCAAAGTTTAGGGGGATTAAAAGAagttattgaaaagaaaaaatggcaaaaagtaGCTGATGGAATGAAAATACCAAAATCTGCTCAAGACCGTGTAACCAAATTAGATGATATTTACTGCAAATATTTGTTACCATATGATACATTATCTCCAGgagaacgaggaaaattatttgatgaaGTCGAATCTGAGtggataaaaagagaaaataaaatcttgcTGAGGCAAAATGCGTCAATAAGTGAAAATGAAGACGAAGAAGATGATGATAGCTCTGATGAAATCGAGGAATGCAttgtgaaagGTAGAAACATGCCATTAAATGCCTTTTATCGCATTGCGCGTAACACACAACGTATGTGGTTTGGTGAAAATCAGCGATCTGCAAACGAAACTGAAGGTGCTTCTGCTGATGAGGTTGAAAGTGCATTTTGGAAACATGTTGCTGAAAGGAAACGACATGTTTGTGTACACGCTGCAAGCATTGATTCAAGTGGACGTGGTTTTGGATTTTCAGTTGCTAAAAATAGTCCATTCGCAAGACATCCATGGAATCTTAAAGTACTTACTAATAATGCTGGCTCAGTACTAAGAGCTTTAGGTCCCATAATggGTGTAACAGTACCAACACTTCATGTGGGTATGTTATTTAGTGCATGTTGTTGGTACCGTGATCCTCATGGTCTTCCTTGGATAGAATATTTACATACTGGTGctaaaaaaatttggtatgGCATACCAGATGAGCACAACAATAACTTCAGAGAGGCTCTTTCAAAAATGGTTCCacgatattgtaaaaataaaactatatggCTACCTTCAGATACAGCAATGGTTCCGCCAGAATTATTAGTTGGTAATGGAGTATCACTATGCCAAACTGTTCAAGAACCAGGACagtttataattgtatttcctAAAGCATTTACATCGAGCATATGCACTGGTTATGTAGTATCTGAAAGTGTTTACTTTGCACAACCATCCTGGTTAGAAACTGCGGAACAAGTATttaaagACATACAAGATAGCTGTGAAccatcaattttttcatttgaaagattattatttaatatcattaatgaCTCTAGATCTCATATAGAAGTATTAAAACagattCTTCCAAGTGTAATTAAAATCCGTGAGAAAGAAATAAGTTATCGTAAACAATTAGAATCAATAGGTCTTATAAATACAGAAAGATTACCTTTACCAGATAGtggaaaacgaaggaaaggaaaaaaagtaaaagaagatGATGGCGACTTTGAATGCGAAATTTGTAGAGCTAATTTGTTTGTCTCATTAGTTAGTAATTCACAAGATGATAGTGTTTATTGTTTATCACATGCattgcaattatttaacagaaaaaaacaaattttaaaacattatactctaatgtatacatataacgAGgAAGAATTAAATGACTTGATTCATAAACTAGAAGAAAGAATTGAAGCTAAATCTAAAAAGtttaatcaaatcaaacaaacaaagtaa
Protein Sequence: MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATTVFNPSHTPIKDKEKTKPAVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGSKKEKLDNKPTHTVTDKIVSINIPTEDQKSDSIQKTIVTKVKPVITDKKKVPNTIQKNITTFKSTTSTVQALKKKYQEQRLAKQRIKNKFKTSCVMRTRSCTEQTLLKSVNKLAPRKFLPRIETKRLGLRSSVLADKTKKASSKVKPVASKPKKKVIVKQKNSDTSNSESTSEEEEEEEGPSEKSTPQMKRTIQKTVQKNICTRSKSEMRRITRSHSGTISPKNLCRRPTRKTKEAAAVYMEILGRKLVSPDLENDNISIDSFPELPNTRKTTQAENEVKIKVKQPVTKATTKNKDGKITSIHSTSNKRLDKTKTNKIDFKSKRLIRVHKYCEIDTDEESVSSNETSNIRPVTRRSLGKLNKPVQHNIKFNKEKFVMKRKREQSSKSLLEKDNRLKQKEIKNTIAENTDSDEETLGMLLNKLKKKKDDNEQKEIINKNSNHDVEDKIKQSVNEDVVKTDLSKISDDEESFRGFTKKAISKVLNSCQTHVNVNLLTAKKTNDKLETAKMEDGQSTDVTKHVDKELSSNKPLLSINSSSVPNILENQHLQKSEKDKSELSDEIEKEISAKDIKNECHHKTEISSTNVIDMSLSTLHVRKEKVNMSTEQIEKWLTESSLAKEESKLEMENVSTFKYDICEKKTDVSHLSISTKIQHLVRPVNVTLSKLAEKASVKDRVSTYNKYVPVIAGELQPDMKQQNEFSNTNINTFINKQSTNLKDINKGRSINLNKDSCPGEEGDSTLKSDQNSIDTSSEKKIPIEKKTIFQPRKPFLPKVKERKTVTPNANAFSPENESSVYAFESDTEIPVNTPFRRKARDSNKPNVLRNLSETDADKIKNNANKSENNTNKSKNNINMSVNEANKNIERTIKDNCEITTSKEIPNSSSKNESEVIEIKSISNSTLNVNKFELPKNFATLANIQVLPLDKLTTTWSNVNCSTSIAVQVNLDDNAQTQKQIEEGDVNQQKSTEISTQTENSNENDDENDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSTIARCPPVGTVQPTTRTPPNSTLITTDHSVPSTSSNTASIVTTSNSEPQPSTPTKNENIAQTANKQNIGTALNIGIEKLQKSPKNSRERKTSIDSSKNGKRCQIKTKQKSSEIYSPTNNVTFPSAKSENIEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPGERGKLFDEVESEWIKRENKILLRQNASISENEDEEDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSANETEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVGNGVSLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDSRSHIEVLKQILPSVIKIREKEISYRKQLESIGLINTERLPLPDSGKRRKGKKVKEDDGDFECEICRANLFVSLVSNSQDDSVYCLSHALQLFNRKKQILKHYTLMYTYNEEELNDLIHKLEERIEAKSKKFNQIKQTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01424161;
90% Identity: iTF_01417496;
80% Identity: -