Fvar003097.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Frieseomelitta varia
Gene Symbol
Rel
Assembly
GCA_011392965.1
Location
WNWW01000215.1:1641407-1647241[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.3e-39 2.8e-35 121.0 0.5 1 168 67 252 67 253 0.91

Sequence Information

Coding Sequence
ATGCCTGAAGTTTATACAGCTTTTGAAAACGAGGACTTTTTCTCTTCTGGATATGAATTACAAGCAATGAACACTCGAGGTATTTACAGTCCAAGCAGTGGATCCCAAGAGACAGCAAGTGTTAGTTCATCTATGTCTGTATTGTCATCATTACATGATAATGAATTAACTGACATAAcagTTATTGGAGATCCATATATAACAATCTTGGAACAACCTacagaaaaatttagatttcggTACAAATCTGAAATGGTAGGAACACATGGAAGCTTAGTAGGATCAAATCGTAAGAATGTACCAACAGTACAAttacatAATTTTCTGGATCCTGCAGTAATACGATGTACATTAGTTACATCTGATGAAGGACTTTCCAGAATTCCTCATGCTCATAAATTAATCCGTAGAGATGGTGGTCAAGATTATGATGATCCacattatattacagtgtCTGCTGAAACTGGATATACTGCAATATTTCAGGGAATGGCAATTATACACACTGCAAAAAGGCATATTAGAGATGAGCTTATAAAAAAGATGAGACTAGAAGctttagagaaaaagaaaaatacaaatataaaggCAATTCTTAATAGTAGAGAAGAAGCACAAattaaagttgATGCTGATCACTATCAAAAACATATGAATTTGAATAGTGTTGCACTTTGTTTTCAAGCATTTGTCACAAATCATTGTGGAGTAATGATACCAATAACAGAACCTGTATATTCACaaactattaataatcttaAAAGTGCATTAACTGGCGAGCTTAAAATATGCAGAATGGATAAACTCACTAGTAGTGTtgaaggaggagaagaaatatttatacttgtaGAGAAAGTAGGAAAAAaaaatatcagaataaaattttttgaattaaatgaGGATGGTTGTGAAATTTGGAGTGCATATGGACGTTTTTCAGAATTGGATGTACATCATCAATATGCCATTGTATTCCGAACTCCACCATACAAAGatcaaaatattactttacCGAAAAACGTTTTTATACAGTTAGAACGACCATCTGATGGAGATTGCTCTGATGCAAGAAAGTTTACTTATAAACCAAGTGATAGAATTATAgGTAGAAAACGTCAACGAATATCTTATTCTGGGAGTTCggaattatcaaatatattaccaAATACCAATTCCATTGGAAACGAGAATATATCAGAACTCTTAAATAATAGCAACAGCCACGAATTatctaaagaaataaaaaaaatattgtctgAAGGTACTACAACGCCAGTATGCAAAGATTTTCTCAGTGATATAGATGTTGATAattatttaaaattattattaaatagtgAAGAGAATATGCTAGGCACTGACGGCCCATCAATtgtacaataccAAGATGATGTAATGTttgctaaaaatatacttactgAAATTATGCAATGTATGAAAATGGATGCGAAAAATATGGAGGAATATATCCAGAAATTACTTAAAGATCGATCGACATATGGGGATTCCCCATTACATTCAGCACTTCGATATGGTCAACATaatattgtcaaatatcttttaatgttattatgtACTAATAAGGATTGTAAGACGCTAATTAATAGTCAAAATAGTTCtggaaaaACTCCACTGCATTATGCTGTTTTACAAAATCAACCTGAAATTACAAAAGCATTACTTATGCTTGGAGCTGATCCTAATCGAACAGATGATCACGGATTTTCTCCATTACATGTAGCAGTAAAAATATCTGATGCTGGTGCATGTGTTGATGTATTATTATCtgaaaaaggaataaatattGAAGCATATAATGATGCTGGATGGACGGCATTGCATCTTGCAACCAAAGCAGGATCCTATGATGCAGTATGTTCACTTGTTCATGCTGgtgcaaatgtaaataatactgATATGTCTTATGGTCGAACTGCATTGCATATAGCTGTTGAAGGTGGACATAAAAAGATAGTtgaatatttacttaaaaagacaAATATATcagtaaataaaagaaattttagtgGAAACACTGCATTACATACTGCAGTTGTACATACGGGGACACGAGCAAAAGAACTATGTGCATTATTAATACAACATGGTGCAGATCCATATATTCAAAATCATAATCGAGAGTCAAATGATgtgaataaaaagaaggaatCACATGTCAATGTAAAAGTCGAAGTGCATTCAGaagatgaaaatatagaagGAGCGATTGGACAATCATCATTTGATTTAGCTATGAATAAACcagatattttacaAGTTTTTAATGGTCAATCTGAGAAAACTACAAATAAAATGTGTTTAGTTACtacaaaattagaattaaaacaTGAAGATTTAGAAACAAATTGGTTAAACAATGAgcacaaagaaaaattatctatcCTATTAGATAAAACGCAAGGATGGCAAAAACTtgcaaaacaattaaatattgagtACTTGTTACAAACATTTCAACATAATTCGATAAGTCCTTCATTAGGCCTTTTAAATTACATCGATgTGGAGGCAATCCTATCCCTTATGGATATGCAAACAGTATTAAGAGAAATTGGAGAGGAAGAAGCAGCAGAttacataaatgaaatttcatctaTTTGTTCATAG
Protein Sequence
MPEVYTAFENEDFFSSGYELQAMNTRGIYSPSSGSQETASVSSSMSVLSSLHDNELTDITVIGDPYITILEQPTEKFRFRYKSEMVGTHGSLVGSNRKNVPTVQLHNFLDPAVIRCTLVTSDEGLSRIPHAHKLIRRDGGQDYDDPHYITVSAETGYTAIFQGMAIIHTAKRHIRDELIKKMRLEALEKKKNTNIKAILNSREEAQIKVDADHYQKHMNLNSVALCFQAFVTNHCGVMIPITEPVYSQTINNLKSALTGELKICRMDKLTSSVEGGEEIFILVEKVGKKNIRIKFFELNEDGCEIWSAYGRFSELDVHHQYAIVFRTPPYKDQNITLPKNVFIQLERPSDGDCSDARKFTYKPSDRIIGRKRQRISYSGSSELSNILPNTNSIGNENISELLNNSNSHELSKEIKKILSEGTTTPVCKDFLSDIDVDNYLKLLLNSEENMLGTDGPSIVQYQDDVMFAKNILTEIMQCMKMDAKNMEEYIQKLLKDRSTYGDSPLHSALRYGQHNIVKYLLMLLCTNKDCKTLINSQNSSGKTPLHYAVLQNQPEITKALLMLGADPNRTDDHGFSPLHVAVKISDAGACVDVLLSEKGINIEAYNDAGWTALHLATKAGSYDAVCSLVHAGANVNNTDMSYGRTALHIAVEGGHKKIVEYLLKKTNISVNKRNFSGNTALHTAVVHTGTRAKELCALLIQHGADPYIQNHNRESNDVNKKKESHVNVKVEVHSEDENIEGAIGQSSFDLAMNKPDILQVFNGQSEKTTNKMCLVTTKLELKHEDLETNWLNNEHKEKLSILLDKTQGWQKLAKQLNIEYLLQTFQHNSISPSLGLLNYIDVEAILSLMDMQTVLREIGEEEAADYINEISSICS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01417484; iTF_00982740; iTF_01420712; iTF_01420073; iTF_01419423; iTF_01418144; iTF_00982065; iTF_00873591;
90% Identity
iTF_00982065;
80% Identity
-