Basic Information

Insect: Frankliniella occidentalis
Gene Symbol: nfxl1
Assembly: None
Location: ML763037.1:1231313-1236848[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.7 1.4e+04 -3.9 3.2 14 19 194 199 194 199 0.87

2 18 0.15 1.3e+03 -0.6 0.8 4 10 230 236 229 236 0.95

3 18 1.9e-08 0.00015 21.6 16.9 1 19 244 261 244 261 0.99

4 18 1.5e-08 0.00012 21.8 14.4 1 19 297 315 297 315 0.98

5 18 0.82 6.8e+03 -2.9 0.6 5 10 339 344 339 344 0.89

6 18 1.1e-08 8.9e-05 22.3 9.7 1 19 350 368 350 368 0.98

7 18 6.5e-06 0.054 13.4 11.0 1 18 403 420 403 421 0.97

8 18 0.28 2.3e+03 -1.4 0.5 1 10 430 439 430 439 0.73

9 18 0.00015 1.2 9.1 17.5 1 18 455 472 455 473 0.97

10 18 8.7e-11 7.2e-07 29.0 15.0 1 19 482 500 482 500 0.99

11 18 0.5 4.1e+03 -2.2 0.6 5 10 528 533 528 533 0.93

12 18 0.0071 58 3.7 8.5 9 18 548 557 546 558 0.90

13 18 0.00036 3 7.9 8.1 1 12 568 578 568 578 0.96

14 18 0.79 6.5e+03 -2.8 6.1 14 19 606 611 606 611 0.90

15 18 0.00085 7 6.7 10.3 1 18 647 668 647 669 0.90

16 18 0.00022 1.8 8.5 15.5 1 19 680 697 680 697 0.94

17 18 2 1.6e+04 -4.5 1.8 15 19 731 736 730 736 0.59

18 18 5.2e-07 0.0043 16.9 11.8 1 16 741 755 741 761 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.7	1.4e+04	-3.9	3.2	14	19	194	199	194	199	0.87
2	18	0.15	1.3e+03	-0.6	0.8	4	10	230	236	229	236	0.95
3	18	1.9e-08	0.00015	21.6	16.9	1	19	244	261	244	261	0.99
4	18	1.5e-08	0.00012	21.8	14.4	1	19	297	315	297	315	0.98
5	18	0.82	6.8e+03	-2.9	0.6	5	10	339	344	339	344	0.89
6	18	1.1e-08	8.9e-05	22.3	9.7	1	19	350	368	350	368	0.98
7	18	6.5e-06	0.054	13.4	11.0	1	18	403	420	403	421	0.97
8	18	0.28	2.3e+03	-1.4	0.5	1	10	430	439	430	439	0.73
9	18	0.00015	1.2	9.1	17.5	1	18	455	472	455	473	0.97
10	18	8.7e-11	7.2e-07	29.0	15.0	1	19	482	500	482	500	0.99
11	18	0.5	4.1e+03	-2.2	0.6	5	10	528	533	528	533	0.93
12	18	0.0071	58	3.7	8.5	9	18	548	557	546	558	0.90
13	18	0.00036	3	7.9	8.1	1	12	568	578	568	578	0.96
14	18	0.79	6.5e+03	-2.8	6.1	14	19	606	611	606	611	0.90
15	18	0.00085	7	6.7	10.3	1	18	647	668	647	669	0.90
16	18	0.00022	1.8	8.5	15.5	1	19	680	697	680	697	0.94
17	18	2	1.6e+04	-4.5	1.8	15	19	731	736	730	736	0.59
18	18	5.2e-07	0.0043	16.9	11.8	1	16	741	755	741	761	0.86

Sequence Information

Coding Sequence: ATGGATAGAAAACAGAAAGACGGTAGCAACCGTCCAAACCCTTGGCACCAGAAAAGAAGTAGCTCAGGAGAGGGTAGAGGAAGCACTGCTGGTGGATCTAGTTTGGCTAGAAATGGTGGGGGAAAAGGGTCTTCCAAAAGGGGGGCCCCAGGAAGACCCGGTAGCAGTCAGAGCCATGAAACAAAGAGTATCTCTAAGTTCGATGAGGCAAGGTTGAAAATGGAAGAGGCCGTTAAGAAACATATGGTCCATGAATATGAGTCCTCcgacgaagaggaggacgtTCAAGTGGATCCAATTGTAGGAGCAGTACTTCAGTCCTATGCAGCTTTGGGTGGTACTAATGTAGATCTTGGTCGAACTCAATATTTTTTGGAAGAGTTATTTCAATCCGGTGCAGCAACATGTCTTATATGTATTGGCACTGTGAAAAGAGTTGATCCAGTTTGGAGTTGCTCtgcttgcttttgttttcttcatctAATCTGCACACAACGCTGGGCCAAAGATTCCCTCTTGCATCAAAAGCAGGCTCTAGAAGATCTCCCAAGAGACAAGCACCCTTCAAAACTTACTTGGCCATGTCCCAAGTGTCGTAAGGAATATGAATCCGACTCTGTGCCTCAGAGGTACTTCTGTTTCTGTGGTCAAAAGGAGAATCCACCTCATCATTCATGGCTGGTTCCCCATTCATGTGGCGAAACATGCGGACGACCCCTTCAGCCTGCATGTGGACATACTTGTTTACTTTTGTGTCATCCAGGTCCATGCCCACCTTGCCCTAAGACAGTTCGTGTCTCATGCCACTGTGGGAAAGAGTTACCTAAGCCACAGCGCTGCAGTCAAAAGTCTTGGTCATGTGGCAATGAATGTGGGGCAGTTTTGTCTTGTGGAAGTCATCGTTGTACGTCCTCCTGCCACCCTGGTGCATGTGAACCATGCTCCAGGAAAAGCGAACAAAAGTGTGCATGTGGGCTTCAAAAACAATATCGCCCATGTTCCACTCCTGTTTGGAATTGTGACAAGgttTGTGGGGAAAAGCTACCATGCGGCAATCATTTCTGCCAAAGGATATGCCACTCTGGGATGTGTGGTTTGTGTCCCCTTGGTCAAAATCGCACTTGTCCCTGTGGAAAAATAACTTACATGTTGCCTTGTACCGAAGACATCCCTCCATGTGGTGACACATGTGGACGGATGTTGAACTGTGGTATTCATGCTTGCCCTGAACGCTGTCACCGAGATAAATGTGGAACATGTCTTGAGGTAACCATCAAACTGTGCCGTTGTGGCCTCCACAAGAAAGAGTTGCCTTGTGCAAGAGAATTTCTTTGTGAAACTAAGTGTAAACGTTATAAAGATTGTGGCAGACATCCATGTAATCGCAAGTGCTGCGATACGCAATGCCCACCTTGTGAAAAGCTGTGTGGTCGCACATTGACATGTGGACAACACAAATGTGAATCAGTCTGTCATCGAGGACCTTGCTACCCTTGTCCTGTAACTGCATCAGTAAGTTGTAACTGTGGAGGTACTGTAATACATGTGCCATGTGGGCGCCAAAGAAGAACTCGAGCTCCTCGCTGTAATAGACTGTGTTTGAACCCACCTGAGTGTCACCATGAGAAGCGAGAAGATCATTCTTGCCATTTTGGTCACTGCCCACCATGCAATCAATCATGCAACTTTGTACATTCTCCATGTGGGCACAGATGCACCAAACCCTGTCATTCTTCTGTCTGGGTTAAAGTACAACAGCAAGCTCCAGCAGGCCCATGGGAACTTGCTGCTCCCCAGCTTGTTCTTCGCAATCTTCCTTGCCCTCCTTGCTCGGAACCGGTGAATGTAATATGTTTGGGTGGCCATGATTTATCAGTGATGCCTTGTCATGCAGCAAAATCTTTGTCATGTGGAAAGAAGTGTGGTCAACCATTGAACTGCGGGAACCACCTTTGTAGCCTAGAGTGTCATCCAATCAATGATGGTGGTAACTGCGAAACATGTGAAAGCGCATGTGAACTGCCTAGGCCTGCAGGCTGCTCTCATGAGTGTCGTCTCCCATGCCATCCAGCACCGTGTCCACCCTGTCGCATTACATTGCGCCCACGTTGCCATTGTGGTGTAACTCAACTTTATCTTAAATGTGCTGACTGGACACAACCAAATGTGGATCTTGTTGCCCTCACATCATGTGGCAATCCTTGTCCAAAAAGTtttCCTTGTGGACATAAATGTACATCAACATGCCATGTTGGAGATTGCCCAGATTCAGAAAAGTGCTCTAAGAAAACAAAAGTCTACTGTTCTTGTCGCAGGATAAAGAAAGAGGTTCGCTGTGATGTAGGGAGGTCTTTGGAATTTTCTCTTGTATGTGATGAAACATGTCAATCACAGAAAAGTCATAAAGAAAAGGTGCAAGCTGAAGAAGCTAAGCGGCGTCGAgccaaagaggaggaagaagctAGACTTGAAGCAGAacgtttccagaaaaaaattgaagggaCTGGCCGTCGGAAGAACCGTGGGCGCAATCTTGGTGAAGTTGCTGAAACCAACAATCACTCTAGTTTTTTTTACATGGTGATAATGGCAATAGCAGTTGTCTTTGTTGCAAGTTTGTACATAATATGGACTTGA
Protein Sequence: MDRKQKDGSNRPNPWHQKRSSSGEGRGSTAGGSSLARNGGGKGSSKRGAPGRPGSSQSHETKSISKFDEARLKMEEAVKKHMVHEYESSDEEEDVQVDPIVGAVLQSYAALGGTNVDLGRTQYFLEELFQSGAATCLICIGTVKRVDPVWSCSACFCFLHLICTQRWAKDSLLHQKQALEDLPRDKHPSKLTWPCPKCRKEYESDSVPQRYFCFCGQKENPPHHSWLVPHSCGETCGRPLQPACGHTCLLLCHPGPCPPCPKTVRVSCHCGKELPKPQRCSQKSWSCGNECGAVLSCGSHRCTSSCHPGACEPCSRKSEQKCACGLQKQYRPCSTPVWNCDKVCGEKLPCGNHFCQRICHSGMCGLCPLGQNRTCPCGKITYMLPCTEDIPPCGDTCGRMLNCGIHACPERCHRDKCGTCLEVTIKLCRCGLHKKELPCAREFLCETKCKRYKDCGRHPCNRKCCDTQCPPCEKLCGRTLTCGQHKCESVCHRGPCYPCPVTASVSCNCGGTVIHVPCGRQRRTRAPRCNRLCLNPPECHHEKREDHSCHFGHCPPCNQSCNFVHSPCGHRCTKPCHSSVWVKVQQQAPAGPWELAAPQLVLRNLPCPPCSEPVNVICLGGHDLSVMPCHAAKSLSCGKKCGQPLNCGNHLCSLECHPINDGGNCETCESACELPRPAGCSHECRLPCHPAPCPPCRITLRPRCHCGVTQLYLKCADWTQPNVDLVALTSCGNPCPKSFPCGHKCTSTCHVGDCPDSEKCSKKTKVYCSCRRIKKEVRCDVGRSLEFSLVCDETCQSQKSHKEKVQAEEAKRRRAKEEEEARLEAERFQKKIEGTGRRKNRGRNLGEVAETNNHSSFFYMVIMAIAVVFVASLYIIWT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00732369;
90% Identity: -
80% Identity: -