Basic Information

Insect: Frankliniella occidentalis
Gene Symbol: znf423
Assembly: None
Location: ML764493.1:14208-19613[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 2.6e-05 0.0014 18.8 0.2 1 23 10 32 10 32 0.98

2 19 0.0035 0.19 12.1 2.3 1 23 64 87 64 88 0.94

3 19 0.0014 0.074 13.4 0.9 2 23 195 217 194 217 0.96

4 19 1.1 58 4.3 0.1 3 23 233 254 232 254 0.90

5 19 0.35 19 5.9 0.0 3 23 341 361 340 361 0.97

6 19 0.77 42 4.8 0.2 2 14 428 440 427 441 0.86

7 19 0.0012 0.065 13.6 0.1 3 23 468 489 466 489 0.94

8 19 1 54 4.4 0.1 1 23 494 517 494 517 0.92

9 19 0.001 0.054 13.9 0.5 1 23 659 682 659 682 0.98

10 19 0.00021 0.011 16.0 2.6 3 23 769 789 768 789 0.98

11 19 0.083 4.5 7.8 0.5 1 23 803 825 803 825 0.97

12 19 0.022 1.2 9.6 0.4 3 23 834 854 833 854 0.97

13 19 0.028 1.5 9.3 0.0 2 23 1016 1038 1015 1038 0.93

14 19 1.6 89 3.7 0.2 1 23 1042 1064 1042 1064 0.94

15 19 0.46 25 5.5 0.3 2 23 1074 1095 1074 1095 0.95

16 19 0.002 0.11 12.9 0.0 1 23 1103 1125 1103 1125 0.97

17 19 0.026 1.4 9.4 3.0 1 23 1132 1154 1132 1155 0.94

18 19 0.03 1.6 9.2 0.0 2 23 1237 1259 1236 1259 0.96

19 19 0.36 19 5.8 0.0 2 23 1278 1300 1277 1300 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	2.6e-05	0.0014	18.8	0.2	1	23	10	32	10	32	0.98
2	19	0.0035	0.19	12.1	2.3	1	23	64	87	64	88	0.94
3	19	0.0014	0.074	13.4	0.9	2	23	195	217	194	217	0.96
4	19	1.1	58	4.3	0.1	3	23	233	254	232	254	0.90
5	19	0.35	19	5.9	0.0	3	23	341	361	340	361	0.97
6	19	0.77	42	4.8	0.2	2	14	428	440	427	441	0.86
7	19	0.0012	0.065	13.6	0.1	3	23	468	489	466	489	0.94
8	19	1	54	4.4	0.1	1	23	494	517	494	517	0.92
9	19	0.001	0.054	13.9	0.5	1	23	659	682	659	682	0.98
10	19	0.00021	0.011	16.0	2.6	3	23	769	789	768	789	0.98
11	19	0.083	4.5	7.8	0.5	1	23	803	825	803	825	0.97
12	19	0.022	1.2	9.6	0.4	3	23	834	854	833	854	0.97
13	19	0.028	1.5	9.3	0.0	2	23	1016	1038	1015	1038	0.93
14	19	1.6	89	3.7	0.2	1	23	1042	1064	1042	1064	0.94
15	19	0.46	25	5.5	0.3	2	23	1074	1095	1074	1095	0.95
16	19	0.002	0.11	12.9	0.0	1	23	1103	1125	1103	1125	0.97
17	19	0.026	1.4	9.4	3.0	1	23	1132	1154	1132	1155	0.94
18	19	0.03	1.6	9.2	0.0	2	23	1237	1259	1236	1259	0.96
19	19	0.36	19	5.8	0.0	2	23	1278	1300	1277	1300	0.94

Sequence Information

Coding Sequence: ATGAAGACCCACGACAACCAGAAGCCCTTCCAATGCACCGTGTGCAACCGCGGCTAcaacacggccgccgcgctcacctcgCACATGCAGAACCACAAGAAGGCGGGCGACTCGGCGTCCAACGGCGGCGCGTCCAACGGCCGCTCCTCGTCCAGGGCCTCGTCCGAGAACACCCCGTCGCCGGGCACCTTCCGCTGCCTGCAGTGCGGCGACTGCTTCCGGAAGGCGGAGGACCTGCAGTCGCACATGGCCGGCCAGCACCACGTCGACAtggggtcgccgccgtcgcgctccgcCAGCAGGGGGCTGCTCCTGGACTCGCCCCTGTCCCGGTCGCCCTTCCCGCTGCCCACGCTGTCCTGCATGTACTGCACCAAGGACAGCTTCGGCAGCAtggaggcgctgcagctgcacgtgcAGGCCATGCACGGCGCACTCCTCAACGGCGAGCTGCGCGACCtggcggcgcacgcggcccgcTCCAGGCCCTCGGTGGATGACCCGCTCCGCgggtccccgacgacgccgtcgcCTTCGGGGCCGACGACGCCCGGGAGCACGGGGAGCGGAGGTGGGGCCATCCCTTGCGAGCTCTGCACCATGAGGTTCAACTCCGTCTCCGGCCTGCACAAGCACCAGCGCTCCGTGCACGGCCTCGTCGGGCCCAAGTTCCTCGGCGACCCTTCTCCCATCCTGTGCGTGCACTGCTCGCTGCCTTTCCCGTCGTCTGCGGCCTTCGCCGAGCACTACGTCctggtccacggcggcggcgcgagtccTGCGGctctggcggccctggccgcgcggaGCCCCTCGCCGtcacccgcgggccgcgaccgcgaACAGCAGGAGAAGCCGACCGACCTGAGCGTCAGCAGGAAGGCTTCCTCCCGGCGAGGTGCGGACGACAAGTCCCATCTGGGGATGCCGCCCTCAAAACGCTCCAAGTCTAACCATGATCACCCACCTCTTCTTCTGGACGGCCTCATGGGCCGCGACTACGAGGCGGGGCCTCTGCTGTGCAACcagtgcggcgccgcgctgcccgactTCGAGGCGTTCCGCGTCCACCTCAAGGCCCACCTGGAGGAGTCCGGCGCTGGCCTGAGGTCGCTGCTGGGGGCAGACCTGCTGGgtctgctgccccccgcgccagccggcggcccccTGGGTCCCCTGGGATCactcgggccgccccccgcggcggacgAGCCCCTGCCAGGGCGCAGccaccgccgcagccccgcgagcgcttccccgggtgcggccggccacggcctgAGCTGCCCGCACTGCGGCGTGCAGTTCCCGACGAGCACCTCCGAGGACCGCATCGGCGTGGgtgcgctgctggagcgccaCGTGGCCGAGCACTTCCTGGCCACTGCCACAGAGTTCGGCTGCCCGACTTGCAGCAAGCTGTTCGCCAAGCCTGACGAGCTGCAGAAGCACCTGATGGACATCCACGCGCACCACCTCTACCGCTGCGCGCTCTGCCAAGAGCTGTTTGACTCGAAGGTGGCCATCCAAGTGCACTTCGCCGTCAAGCACTCGTCCGCGTGCCCGCTGTTCCGGTGCACCGCCTGCCCCTCGTCGTCGGCCAGCTCCGTGTTCCGCTCGGACCGTGAGTTCGGCCTGCACGTTCGTACGGCGCACGCCACGCACCCGCTCCTGGCCGCCACGCACGCCATGCTCCTCCAGTTCCAGcagaagctgcagcagcgggagcagagggACCTGCAGCGCGACCGCGAGCAGAGGGACCGCGAACAACGCGAGCGCGACCGCGAGCAGCGTGACCGCGAGCGGGAGCGTGACCGGGATCGTGACCGGGACcgagagcgcgagcgcgaccgcGAGGTGGGCAGGGAGGCTGAGacccccggccagcagccgtTCCGCTGCCTCTTCTGCCGCGCATCTTTCGGTTCCGAGCTGGAGCTGCAGTTCCACCTGCCCACCCACACGCGTCAGTACAGCTGCCCGCTGTGCCAGGAGACGTTCCAAGTCGAGTTCCTCCTGGACAAGCACATGCAGACGCAGCACTCGGGCCAGATCAAcggccgcgacacgccgcccggcggcgagggcaaGGCCGCCAAGCCCAACGGCTGCACCAACGGCGACGCGCCCGACCCGCTGCTCAACAACAACCAAGCCGGTGCCTCGTGCGACATCTGCGAGCGCGGCGACTTCGCCAGcgaggccgagctggccgcaCACCGCAAGCTGGCGCACCACAAGAACGGCCAGGGCGCCACCACCAACAGCACCACGGCCAAGAACGGCGCCGTCAGCCTGCTGTGCGCCTACTGCAACGAGAGCTGCAAGTCGCGCACGGAGCTGGAGAACCACATGAAGACGCACTCGCACCAGGGCacggcgggcctgggcggcaCGGGCAAGCACAAGTGCAACATCTGCGACGAGCTGTGCCcctcggccgcggtgctggccgagCACAAGCTGACGCACTGCAAGGTGGTGCAGGGCTCGGCGTGCACTGTGTGCCGCGCGTCCGTCACCACCGAGGAGCAGTTCCGCTCGCACCTGCGCCAGCACGCGGTGCAGACCGGCGGCAACCCCCAGCCGCAAGTGGGCGGGGCCAGCGCACCTCTGTGCCTACCGGTGCAGTGCGTCATCTGCAGGCAGACCCTGGTGTCCGACGTGGAGGTGCGGCTGCACGCGCGCTTCCACCTGCAgacgggtggcgccgccgggcagacCGCCGAGCAGCCCACTGGCTCGCCGGataccgccgcctccgcggccacCTGCTGCATCTGCCTGCAGAGCGGTGACGCCGCTTCCATGGTgccgaccagcgccgccccTCTAGCTGGCCAGTCTGTGTCGTATGTGTGCGCCGACTGCTACCGGAGGCACTCCAAGTTGTCGTCGCGATcaccgcccaccacgccccaggcCTCACGGACTTCATCGCCGTCGCGCCAGAGCCAGGACGACGGCAAGCAGGAGTCGCGGGGGGCGACGTCCGTGACGCCTGAGAAGTCCGCGGCAAGCCAGGACGCCACGACGCCCCAGCGCTGCGGGGAGTGCGGAGTCAAAACCGagtccgccgcggccctggaggcaCACATGGCTGCCGCGCACAAGAACACGTACCAGTGCATCAAGTGTCAGGCGAGCttcgagacggagagagacatcCGCCTGCATGTATCGGCGCACCTGCTCGCCGAGGGCTCCGCGGCCAACGAGTGcaggctctgccgccgccagctgtccaccccgctgcagctgcagctgcacctcaTCGAGCACACCTTTGCGGGCTGCGCATCGTTCACCTGCTACATTTGCAGCGCCGTGTTCACCGCCGCTCGTGGTCTGCAGGCGCACATGCTGGAGCACGGTCTCTCGGCCAGGCCGTACGACTGCTCGCACTGCGGGCTACGCTTCTTCTTCCGCGCCGAGCTGGACAACCACACGCTGGGGCACCACGCCCAGGCGCTGGCGCACGCCAGcatgcaggcccggcccggggacgacgacgaggccgcgCAGGCCTCTTTCTACCAGCATCTGTCCTCGCTCAGCAACAGCAACGGGCTGGACCTGCACTACTACACCGTGCCGCCTGGCGGAGAGGCCTCGGCTGCCAAGTCGCCGCGCAAGTCCCCGGGCCGCAGCAACGGCCGAGACCGGgaccgcgacgggcgcggcgccgcgcccggccccaagCAGAGGTGCCTCATCTGCGGCAAGGACatgccctccgcgcgcgcgctcgcggcgcacCTGCGGTCGAGCCACGGTGTGCAGGACAACGGCCTCGGCCTGGCGCACGGGCTCGACAGCGACCTGCAGGTGTGCCTGCTGTGCAAGGAGGTGCTGCCCgaccgcgacgcgctgctcgtgcACCTCGCCGTGCAgcacccggggccggggctgacGCCGGGCCTCGTGCCGCCCCTGCAGCTGGAGGCGCACATGGCGCTGCTCAGCCAGGCGCACTCgttgcagcagatgcagcatGTGAAGCAGGAGCCGGCCCCCGCCGTCGTCAAGGAAGAGGCCCCCGACGAGGAGACGTCCGTCTCTTCCGTGCCGGCTGAGGAGCGCGCCACTTCGCCGGCAGCGGTGGCTCTGCCCTCGCCGACGGCCACGGTCGCGACcgacgaggcggccgaggactctgccgccagcgcgccaacCTCGGATGGCGCCAAGGGCGAAGGCCCGGAAGAAGTTCAGGCAATTGATGGGAAGGTGGACGACGGAGAGAGAGCCAACGTGAACGATGACAAACCCAAAGGCCGCCAAGGAGGGACTCCTGAGAATGACGTGAGTGATAACTGA
Protein Sequence: MKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKAGDSASNGGASNGRSSSRASSENTPSPGTFRCLQCGDCFRKAEDLQSHMAGQHHVDMGSPPSRSASRGLLLDSPLSRSPFPLPTLSCMYCTKDSFGSMEALQLHVQAMHGALLNGELRDLAAHAARSRPSVDDPLRGSPTTPSPSGPTTPGSTGSGGGAIPCELCTMRFNSVSGLHKHQRSVHGLVGPKFLGDPSPILCVHCSLPFPSSAAFAEHYVLVHGGGASPAALAALAARSPSPSPAGRDREQQEKPTDLSVSRKASSRRGADDKSHLGMPPSKRSKSNHDHPPLLLDGLMGRDYEAGPLLCNQCGAALPDFEAFRVHLKAHLEESGAGLRSLLGADLLGLLPPAPAGGPLGPLGSLGPPPAADEPLPGRSHRRSPASASPGAAGHGLSCPHCGVQFPTSTSEDRIGVGALLERHVAEHFLATATEFGCPTCSKLFAKPDELQKHLMDIHAHHLYRCALCQELFDSKVAIQVHFAVKHSSACPLFRCTACPSSSASSVFRSDREFGLHVRTAHATHPLLAATHAMLLQFQQKLQQREQRDLQRDREQRDREQRERDREQRDRERERDRDRDRDRERERDREVGREAETPGQQPFRCLFCRASFGSELELQFHLPTHTRQYSCPLCQETFQVEFLLDKHMQTQHSGQINGRDTPPGGEGKAAKPNGCTNGDAPDPLLNNNQAGASCDICERGDFASEAELAAHRKLAHHKNGQGATTNSTTAKNGAVSLLCAYCNESCKSRTELENHMKTHSHQGTAGLGGTGKHKCNICDELCPSAAVLAEHKLTHCKVVQGSACTVCRASVTTEEQFRSHLRQHAVQTGGNPQPQVGGASAPLCLPVQCVICRQTLVSDVEVRLHARFHLQTGGAAGQTAEQPTGSPDTAASAATCCICLQSGDAASMVPTSAAPLAGQSVSYVCADCYRRHSKLSSRSPPTTPQASRTSSPSRQSQDDGKQESRGATSVTPEKSAASQDATTPQRCGECGVKTESAAALEAHMAAAHKNTYQCIKCQASFETERDIRLHVSAHLLAEGSAANECRLCRRQLSTPLQLQLHLIEHTFAGCASFTCYICSAVFTAARGLQAHMLEHGLSARPYDCSHCGLRFFFRAELDNHTLGHHAQALAHASMQARPGDDDEAAQASFYQHLSSLSNSNGLDLHYYTVPPGGEASAAKSPRKSPGRSNGRDRDRDGRGAAPGPKQRCLICGKDMPSARALAAHLRSSHGVQDNGLGLAHGLDSDLQVCLLCKEVLPDRDALLVHLAVQHPGPGLTPGLVPPLQLEAHMALLSQAHSLQQMQHVKQEPAPAVVKEEAPDEETSVSSVPAEERATSPAAVALPSPTATVATDEAAEDSAASAPTSDGAKGEGPEEVQAIDGKVDDGERANVNDDKPKGRQGGTPENDVSDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00732690;
90% Identity: -
80% Identity: -