Focc001204.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- -
- Assembly
- None
- Location
- ML762992.1:789918-793560[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-10 6.9e-07 28.9 12.0 3 40 16 51 14 58 0.88 2 2 4.6e-05 0.15 11.8 8.8 4 45 172 213 170 215 0.83
Sequence Information
- Coding Sequence
- ATGGCGCCACCCTCGGAGACCTCGGAGCAGCGCACCCCTCAAACGCGCAGGTGCCTGCGGTGCTTGAAACACGAGAAGGTGGTTTTCAGGAAGGGACACAACTGCCCTTTCCAAGACTGCAAATGTGTCCAGTGTACGATATTGACAAGGAAGTACAACAAACGAAACCAGAAAAGCGATTGCCGGGCCTCCGCTCGCCCTCAGCGCACTCTTCCCACtctggctccggctccggctccggctccgggttCTGGCTCCAACACACCTACAAACACCACGAATACCCCGGCAACATCCTTCATCTGCGTCCCAGTCCTCACACTGGACTCGGCCCCGGTAGGCCCCGGCGTTGGTGCTGCCAGCGGTCCAGTGGCGGCCCCGTGCCTCGAGTTCCTGGTGACAGTACCCGCTGACCACAAGAGTAAGCAGATAAAACAGCGGATGGCACCAAGGCAGACGGCCGCTTTAAATTTGGTGGCGGGTGCCGAGGACACGACCGCGTCGAGTCGAGGTGCGTGCCGGTTGTGTCGAGCCCACGGAGAGCCCAAGTACCACCGTCAGTCCGACGACTGCCCTCACGCCAAGTGCACCTGCTCTGCGCGCTGCAGGTCGTTGCTGGCCAAACGGAAGTGGCTGGCGGCCTTGAAACAACAGGGGCAGGAACAGCCGGGCAGGGAAGTGCCCGAGCAGACAGCCCCGTTGGCGGAGGTAGCCGGCGTCCAGCCTGCCACCTcgagctcggcggccccgggaggcgaggggcagagcaggcagaggcTGCCAACTGGACCCGTCGGTCTCGCTGGCGACGAGTCAATCAGGATCGAGTCTGAAGACCGCACACCTACACGTCGGCTCTCCGTGGTGGTCACCAACGAAGCCACGGCGCGACGGCTGCAGTCACCGCCCCGTCGCCCGTCGGTCGAGGTAGTCGAACTCGAagagccaccgccgcgcccgccctctgtGGAAGTCATTGAGGCGCCGCCAGCAGTGCCGCCACCCTTGGTCGTGTTGGACGAGCCGGACGAGCCGGACGAGCCGGACGCGGAGCTTCGTTGCCCGACCTACCCCACCTGTCAGTCGGTGTTCGACTCTGAGGAGGAGCTCCAAGACCACGTGGACTCGGTGCACATGCAGCTGGTACCGCTGCGGactttaaaaaaactgtttcaaaTGATGCATCTGGCCGGTCAGTCTATCGAAGAACTAGCGGATCAGTTCGAGGAACACAGTTCTGGAACATCCGTATAG
- Protein Sequence
- MAPPSETSEQRTPQTRRCLRCLKHEKVVFRKGHNCPFQDCKCVQCTILTRKYNKRNQKSDCRASARPQRTLPTLAPAPAPAPGSGSNTPTNTTNTPATSFICVPVLTLDSAPVGPGVGAASGPVAAPCLEFLVTVPADHKSKQIKQRMAPRQTAALNLVAGAEDTTASSRGACRLCRAHGEPKYHRQSDDCPHAKCTCSARCRSLLAKRKWLAALKQQGQEQPGREVPEQTAPLAEVAGVQPATSSSAAPGGEGQSRQRLPTGPVGLAGDESIRIESEDRTPTRRLSVVVTNEATARRLQSPPRRPSVEVVELEEPPPRPPSVEVIEAPPAVPPPLVVLDEPDEPDEPDAELRCPTYPTCQSVFDSEEELQDHVDSVHMQLVPLRTLKKLFQMMHLAGQSIEELADQFEEHSSGTSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -