Focc013232.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- -
- Assembly
- None
- Location
- ML762983.1:1274532-1288148[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 3.2e-06 0.01 15.6 8.4 4 35 4 37 2 40 0.88 2 6 4.5e-08 0.00015 21.5 11.1 4 35 45 77 43 81 0.92 3 6 8.8e-07 0.0029 17.3 6.6 5 43 82 122 78 126 0.88 4 6 8.2e-07 0.0027 17.4 5.0 4 43 165 206 162 210 0.88 5 6 3.8e-08 0.00013 21.7 9.1 4 38 296 331 294 337 0.92 6 6 3 1e+04 -3.6 0.2 17 24 903 910 901 911 0.82
Sequence Information
- Coding Sequence
- ATGCCGTCGCAATGCACGTGGTGCGAGAGACACGGCGAGTGGAGCCTCTTTAGCCAGGGACATCTTCGAGTATGTCGATTCTATAGATGCAAATCTTGTCAGATATGCGACGCCAATAAGTTCTGCTCTAAATTCTGCTCGAAGTGCAGTAATCATGGAATCagtgcgcgcgcgacgccgcggcaCACAGCCAACTGCAGGTATGGCGCATGCACCTGCTCTCACTGCAGGACTGGCGCCGTCTGCGTTTTCTGCAAGTTTCACGGGTTGCAGGAGTACGACGCAGGGCAGCACGCCAAGTTTTGCAAGTTCCGCAGTCGTTGCTCCTGTGGACTTTGCatcggtgagcggcggcggcagggactgGACAAGAAAGAGACTCCCGCCAAGGAGCAACCCTCCGCCCAAGGTTCGCACCAGCAGAAGGACCAGTCCGAGAGGCAGTCTTCTGCTCAAAACGAGGAAGTACGCGCTAAAGGTAGTGCCACCAACTTCTGCGTTTTTTGCAAATTGCACGGCGCAGAAGTGTTTGACATCGGTCAACACGCAAAATTCTGCAAGTTCCGCAGTCGCTGTTCCTGTGGACTATGCtttggcgagcggcggcgccagggactGGACAAGCAAGAAACTCCCGCCAAGGAGCAGAAGACTCAGTTTGAGAAGCAGACACCAGGTCAACGCGAGCAAGAATACACAGAGCAAAGTAAAACTGTAGAAAATCCATCATCTCAGCAGAGCAAGACTGAAGACGGGCTCGTTGTCACCAAGATGAGCACAGTTACGAGCACCAAATCAAATGTACAATCCAAGGAGCAGACTCGCAAGCGGAAGGCATCTGCTGGTGTATCGTCCGACCCTAAACGCGCCCGCACTAACCTGGATAATTGTCTATATTGTCTCAATCACAACTGGCACTTTCCAATGAAAAGCCACCACCGAGATGTGTGCATGTTCCGGCTGTGCCGGTGTACCGACTGCCGCAGAGTGCGCGCGGACTTGAAGGCTCGCTTGCAGCGGACTCCACAGGTTGAGACGGCCGTCGCCCCGCCGAAGAAGCCGTTGGCCGTTGTCCCCCCTAAACCCAGAGTATTCTCTAATAATACAGCGGTGACCACAGTGCCCAGCACCAGTTCACCGCCAGGCAATACGCCAGAGAAACCCAATAGGTCAGATGACCCTGACCCTCCCCTTAATTCGATTGAAACGACATCTGGTGACAGGCCATATAATCTCGAACCCCCTGTCGTCAAGTCAGATGTGCCCGCCTCTCCTCTTAAAACAGAAGAGACGGATGAGACTTCTGTCGAGACGGAGAAAGTCAATGAAACTCAACCTGCATCAGTTGTCAGCACAGATGAAGCCAGGAGTAATGAAACTGGGGTCAAGAGCGCACCGGAATTGCAGATCGTTGAAAAGTTGGTGGTAGACAAGGCACTGGCCGACATGCAGTGCTCGGACGACAGCAGCAACGATGGCGTAACTGTCTTCCTGAACGGGGAAGACTTCGCTGTCGTGGACGAAGTCGGTGAAGACTCTACAGGTGACGAAACGGACCTAACCGTTTCCTCAAGTTCCACTCTAAAGATTGCCACATTAAAAAAGATAGGTGTCAGTAAAACAGAAGAAGTTGACCTTGACAGAAAAAAAGATTGCAAGGTCCTGTCGACTTTGGAAGATGAGTCTAATAATATTGATGAGCAGACTGCCCCTAAAGTATTGCCAAACTTGGCAATTAGTAGAGAAACCGAATATTTGGAGAATACTGTTTTAGAGCCAGAAGTTTGTTCTGATAGTGTTTGCACATCAAAGAATACTGGTTGTGATTCTCAAATAACTCAGTCGCAGAACACTGAAGACGTAGCCGTGGATAGCTTACCGGACGACATCGGCGGCCGTGTTAAAGACTCGCATGCACCTGCTCCAGATGCGTCCAGCCTACTGAACTGCGGTATCGAGCGTGATCAGATGCAAGTTGACACAGGCACTGAAATCACCCAGAATACTTTAGTGAGCACGCCGGATGATAGTGCGTGTGGAGAGGTGGGGAAAGAGAGGACTTCTAAAGACGAAGAAGAATGTGACTCAATGAGCAGTTTGCCGGAACCCAAATCTACCATATCTCTGATTAACAGCAAATCAAGAGAATGTATAAACGATACTAGTAATAGTCACAACGTTACCGTTGGTGCTAATAGTAGCGAGTCCACATCTGACCGAGCTTTTCTGGAAACAAAAGTTGCCGCGGACACCGTACCCCATCAGTATTCTGATTTTCACAAAAACTCTGGGACTgaacaagaaagaaaagacaTTGATTCGACGTCCATCATTAATGCTGTAGAAAATACAGATGTAGACCCGTCGGCGAAAGGCTGCCTTCTAAATGAGGGCAAACAACCGACACCTGCAGAAAAAACTCAAATAGAGACACCCAACATCAATACAGAGGAAATCGGAGAAAAGACGCCATCTAACGATTCATCAAAAAAGGGTGAAGGTAATGAACCGGAACAGGCGCTACCAACCCCTTCAGTAGAGCCAAGCAAAGATGCCAgtgactccccctcctccgacgCAGACATCTGTAGGAGCCTTCTTGACGAGCTTGCAGAGTTTGGCAAAAACCTGAAGCCTTATGAGCGATATCCGCGTTCAGCCAGCTTGGGTAACATTTTTTCAAACTTTCAAGAGCAACCAAGCGTGCGGAAAGAACATCGGCGAAGATGCAGTGCTGCTGTGCCTGACATACTCGAGAGACAAGCTCAGTCCGAGACCTTGTCTGAAATCGTGTCAGCCAGCTGTAAGGGTCAAGATGAAGGACCCCCTACTCTCACGAGCGGGGATTCGTCCTCTGCAGTGCAAGACCTTCCTTTAACAAACCATAATTGTAAAGATAAATACCCAAATCAGCTGACGAGCGGTGATTCGTGCTCTGCAGCAGTGAGAGACCTCCGACCATTGACAAGCCCGGGTTGTAAAGATAAAGACCCCCATCCCCAAACGAGCGGAGATTCATCGGAGCAAGACCTCCATCCCCAAACGAGCGGAGATTCATCGAAGCAAGACCTTAATCCTCCAACAAACGGAGATTGTAACGAGAAGGACCCTCAGCCCCAAACAATCGAACAACCAACCGTCGATTTAGCGTGTTCAAAGAAAGACTCCATTCTCCCCCAAAACGGGGATTTGCCTGGAGCAGTGGAAAATACACATCCCCAAACAGAAACTAGTCAAATAGCAGAGCTGACAAATGCGGAATCTGGCAGCTTCATTTGCGCTGTATGCGGAAAAATCTTCGGGACGCTTCTACAGCTGCGAATGCACAGCAACATCCAGCACCAGTGCGACCCTGAGTCGGACGATGAAGTGCGTCTTTGCCGGGTTTGTTCGTTTGAAACGTCGAACCAGGTGGCTCTTTCTGATCATGAAAATGCCCACATGGGGTTGGTCAGTTacgaaaaattgtttttatttatcaAACAAGTCGACAACTGTAtaagttttaaaaacaagaGCAGTCGTGCGGAGAGAATCTAG
- Protein Sequence
- MPSQCTWCERHGEWSLFSQGHLRVCRFYRCKSCQICDANKFCSKFCSKCSNHGISARATPRHTANCRYGACTCSHCRTGAVCVFCKFHGLQEYDAGQHAKFCKFRSRCSCGLCIGERRRQGLDKKETPAKEQPSAQGSHQQKDQSERQSSAQNEEVRAKGSATNFCVFCKLHGAEVFDIGQHAKFCKFRSRCSCGLCFGERRRQGLDKQETPAKEQKTQFEKQTPGQREQEYTEQSKTVENPSSQQSKTEDGLVVTKMSTVTSTKSNVQSKEQTRKRKASAGVSSDPKRARTNLDNCLYCLNHNWHFPMKSHHRDVCMFRLCRCTDCRRVRADLKARLQRTPQVETAVAPPKKPLAVVPPKPRVFSNNTAVTTVPSTSSPPGNTPEKPNRSDDPDPPLNSIETTSGDRPYNLEPPVVKSDVPASPLKTEETDETSVETEKVNETQPASVVSTDEARSNETGVKSAPELQIVEKLVVDKALADMQCSDDSSNDGVTVFLNGEDFAVVDEVGEDSTGDETDLTVSSSSTLKIATLKKIGVSKTEEVDLDRKKDCKVLSTLEDESNNIDEQTAPKVLPNLAISRETEYLENTVLEPEVCSDSVCTSKNTGCDSQITQSQNTEDVAVDSLPDDIGGRVKDSHAPAPDASSLLNCGIERDQMQVDTGTEITQNTLVSTPDDSACGEVGKERTSKDEEECDSMSSLPEPKSTISLINSKSRECINDTSNSHNVTVGANSSESTSDRAFLETKVAADTVPHQYSDFHKNSGTEQERKDIDSTSIINAVENTDVDPSAKGCLLNEGKQPTPAEKTQIETPNINTEEIGEKTPSNDSSKKGEGNEPEQALPTPSVEPSKDASDSPSSDADICRSLLDELAEFGKNLKPYERYPRSASLGNIFSNFQEQPSVRKEHRRRCSAAVPDILERQAQSETLSEIVSASCKGQDEGPPTLTSGDSSSAVQDLPLTNHNCKDKYPNQLTSGDSCSAAVRDLRPLTSPGCKDKDPHPQTSGDSSEQDLHPQTSGDSSKQDLNPPTNGDCNEKDPQPQTIEQPTVDLACSKKDSILPQNGDLPGAVENTHPQTETSQIAELTNAESGSFICAVCGKIFGTLLQLRMHSNIQHQCDPESDDEVRLCRVCSFETSNQVALSDHENAHMGLVSYEKLFLFIKQVDNCISFKNKSSRAERI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -