Basic Information

Insect: Frankliniella occidentalis
Gene Symbol: SMARCC2
Assembly: None
Location: ML763061.1:387904-394092[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.4e-14 8.1e-11 41.7 0.1 3 44 587 628 585 630 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.4e-14	8.1e-11	41.7	0.1	3	44	587	628	585	630	0.95

Sequence Information

Coding Sequence: ATGAACATCTTGAGCCCCAAAAAAGATGGGAGCCCCAACGCCAAATTCTTCGAGTCACCTGAGACTATTTCTCTTTTGGATGGAGTCAAAACTTGGCTCCAGAAGAATGCGAAGAAGTACATTCAAACAGATCCTCCGACCAACAAGGGACTTTCGTCTCTTCTAATATCACTTGTACAGTTTCAAGAAGACAATTTTGGTAAAAACACTCAGAAACCACAGCACACTCGCCTTCCTATGAAGCTTTTTCTCGATATGAAACCTGGTGGTGCACTTTGTCATATTCTTTCAACGATGTATAAGTTTAAAAGTGAACAAGGATGGCGTCGCTTTGACTTGCAGTCTCCATCACGTTTAGAGCGGAATATTGAGATGATGGGACAAGTAGAGAAAGCATTAAATGCATCTAAAGTGTTTTCTCCTCCTAATGTCTTTGTGAGACCAGATGTTGACAAGCAGACAGCTCAGAAAGTTAAagaagttgttaaaaaacatcAGGGAAATATCACAGaaaaTGAGTCGGAAGCCTCACACATTGTCTACCCTATTTGTGATCCTTTGGATGAAGAGTATGCTCGCCCAGTTCTTCGCCGGGACCGAATGGTTATGATGCATTGGTACTATTTCCCGGACAGCTATGATTCGTGGAATAGTGTTGAGCTACCCGTGGATCCTCCTGATTCACCAGCCCCACACACTGAAGCGTGGAGGGTTGGTGCTAACTGGGCCATTGAAATGGAGCAGTacaatgaatggatgaatgaagAAGACTATGAAGTTGATGAGGCTGGCAAAAAGAAAGTTCATAAGttacGCATCTCTGTTGATGATGTAATGAGTTTATCTGATCCGTCAAACAAGAAAGGCAAGCCGAAGCGTAAACGTTCACCTAGCCCTCCACCGAAAGGCAAGAGGAAAAGtggTCGCAgccctgctgttgttgttggcaaAAAACACAAAGgggataatgatgatgatgatctgaCCAAGGATATGGATGATCCTCCTGCTGAGCCAAATGTGTCTGAAGTTAATGTTAGCAAGCCAGCGCTTTCTTCCAAGAAAGATAGTGACCTTCAGCCTGTTAAGGGTGGAACAGTTCATGATTTAGATGATGATGGTGACAAGAACGAGGACAGCCAAATGGGAAAAGCTTCAGACACCCAAGAAGGAACTTTGAAAGATGACCAAGAGGACAATGTGACTGAGCAAACTCACCACATAATAATTCCAAGCTATTCAGCATGGTTCGATTACAATGCTATTCATACTGTTGAGAAGAGAGCTCTTCCAGAATTTTTCAATGGCAAGAACAAAAGCAAGACACCTGAAATCTATCTGGCTTACCGCAACTTCATGATTGATACATACAGACTAAACCCCACTGAGTATATAACTAGCACAGCTTGCAGGCGGAACCTGGCTGGTGATGTGTGCGCCATCATGCGCGTTCATGCTTTCTTAGAGCAGTGGGGTCTTATCAACTACCAGGTGGATGTTGACAGCCGACCCACTCCCATGGGTCCTCCGCCCACCTCCCACTTCCATGTTTTGGCAGATACACCGAGTGGATTGCAGCCTGTTAACCCACCTAAAACTCCACAACCATCTGCTGCTAAAACTCTTCTGGATATGGACAAAAAAGAAATTCCTAAGAAATCTGATGCAGATCCAGGAAGCATTTTCGGTCTAAAACTTGACCAGTATGCTCGGAAACCAGCAGCACTGCGCAACAAGACTGCTGCTAGTATGACCCGTGACTGGACTTATCAGGAAACTCTTCTGCTGCTTGAAGGTCTTGAACTCTACAAGGATGACTGGAACAAAGTTTGTGAACATGTTGGCAGCAGGACACAAGATGAGTGCATCTTGCACTTCTTGCGTTTACCTATTGAAGACCCTTACCTCGAGGACCATGAAGCTGGAGGTGCTCTTGGTCCCTTGGCGTACCAACCCATTCCGTTCAGTAAGGCTGGAAATCCTATCATGTCCACTGTTGCTTTCTTGGCATCAGTAGTTGATCCACGAgttgctgcatctgctgcaaaGGCTGCCATGGAGGAGTTTGCCAACATCAAGGATGAAGTGCCCGCTAATGTTATAGAGCAACACTTGAAGAGTGTTGAGGCAGCTGTTGCAGAGGGAAAGACTGATCCTGTTGCTGGCCTTCTTATGACTGGTATTGCTGGTACAGAACCTGAGAAAgatgaagaagagaaagagaagaaagatgGGGAAAAATCAAAGGATGATAAGGACAAGAAAGATGGTGAAGATGGAGATAAGGAAGGTAAGGAAAAAGATGAGAAAGATAGCAAAGAGGAGGACGAAAAGAGTGAGAAAGATGGAAAGGAAGATGCAAAGGACAAAGAATCTGAGTCTGAGGTTGATAAAGCAGTCAAGAGTGCTAAAGAGGATAAGGAAAAGGATGTTAAGGATACCAAGAAGGAAGAGAAGGATACAGATAAGGATGTAGAAATGAAAGAGGTAGAGAAAAAAGATTCAGAAAAAGATGCTGAAAAAGAGAAGGATGAGCCCATGGATATTGATAAGAAGGAAGGAGATGAGGatgaagaaaagaaggaaaaggatGAGGAAAAAACTAAAGATGTTCCAGCTAAGCCTAAGATTGTTAAAGATGCTCAATTACagtcagctgcagctgctgctcttgctgctgcagcagtgaaAGCCAAGCATCTGGCAGCTGTTGAGGAACGTAAGATCAAATCCCTTGTTGCTTTACTTGTGGAAACACAAATGAAGAAGCTTGAAATTAAACTAAGACACTTTGAAGAGTTAGAGAGCACtatggaaagagaaagagagggcctAGAGTACCAGCGTCAACAGCTAATTACAGAGAGACAACAGTTCCACCTTGAACAGTTGAAGGCAGCTGAATTCAGGGCAAGACAGCAGGCTCAGCAGAGACTGCAAATGGAACATGATCAAGGAGGTATACCGCCGGCTTCACCTTTGactcagcaacagcagcaaatgCAGCAAACCGCTCCTCACCCACCTGCACCACATTTGCAACCACCCCACCCACAGCAGCAACCTTCACCGCAAGCAACGTCAGCTTAA
Protein Sequence: MNILSPKKDGSPNAKFFESPETISLLDGVKTWLQKNAKKYIQTDPPTNKGLSSLLISLVQFQEDNFGKNTQKPQHTRLPMKLFLDMKPGGALCHILSTMYKFKSEQGWRRFDLQSPSRLERNIEMMGQVEKALNASKVFSPPNVFVRPDVDKQTAQKVKEVVKKHQGNITENESEASHIVYPICDPLDEEYARPVLRRDRMVMMHWYYFPDSYDSWNSVELPVDPPDSPAPHTEAWRVGANWAIEMEQYNEWMNEEDYEVDEAGKKKVHKLRISVDDVMSLSDPSNKKGKPKRKRSPSPPPKGKRKSGRSPAVVVGKKHKGDNDDDDLTKDMDDPPAEPNVSEVNVSKPALSSKKDSDLQPVKGGTVHDLDDDGDKNEDSQMGKASDTQEGTLKDDQEDNVTEQTHHIIIPSYSAWFDYNAIHTVEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDVDSRPTPMGPPPTSHFHVLADTPSGLQPVNPPKTPQPSAAKTLLDMDKKEIPKKSDADPGSIFGLKLDQYARKPAALRNKTAASMTRDWTYQETLLLLEGLELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFANIKDEVPANVIEQHLKSVEAAVAEGKTDPVAGLLMTGIAGTEPEKDEEEKEKKDGEKSKDDKDKKDGEDGDKEGKEKDEKDSKEEDEKSEKDGKEDAKDKESESEVDKAVKSAKEDKEKDVKDTKKEEKDTDKDVEMKEVEKKDSEKDAEKEKDEPMDIDKKEGDEDEEKKEKDEEKTKDVPAKPKIVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELESTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAQQRLQMEHDQGGIPPASPLTQQQQQMQQTAPHPPAPHLQPPHPQQQPSPQATSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00731430;
90% Identity: iTF_00731430;
80% Identity: -