Basic Information

Insect: Frankliniella fusca
Gene Symbol: SMARCC2
Assembly: GCA_029379305.1
Location: JAHWGI010000979.1:1330833-1335850[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.2e-13 1.6e-10 41.7 0.1 3 44 587 628 585 630 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.2e-13	1.6e-10	41.7	0.1	3	44	587	628	585	630	0.95

Sequence Information

Coding Sequence: ATGAACATCTTAAGCCCTAAGAAGGATGGAAGTCCTAACGCTAAATTCTTTGAGTCTCCCGAGACTATGTCTCTGTTGGACGGAGTTAAAACTTGGCTCCAAAAGAATGCAAAAAAGTACATTCAAACTGACCCGCCAACCAACAAGGGCCTCTCCTCACTTCTGATATCACTCATACAGTTTCAAGAGGATAATTTTGGTAAAAATGCACAGAAACCTCAACATACACGTCTTCCTATGAAACTTTTTCTTGATATGAAACCTGGTGGTGCACTTTGTCATATTTTGTCAACTATGTACAAATTCAAAAGTGAACAGGGTTGGCGCCGCTTTGATTTGCAATCTCCATCTCGTCTAGAGCGTAATATTGAAATGATGGGTCAGGTTGAGAAGGCATTGAGTGCAGCCAAGGTGTATTCTCCTCCTCATGTATTTGTAAGATCAGATGTTGACAAGCAGACTGCCCAGAAAGTCAAAGAGCTTGTCAAAAAGCATCAGGGAAATATTACTGAAAATGAGGCAGAAGCTTCTCATATTATATATCCAGTATGTGATCCTCTGGATGAAGAATATGCTCGTCCGGTTCTACGTCGAGACCGAATGGTCATGATGCATTGGTATTATTTCCCAGACAGCTATGACTCGTGGAACAGCGTTGAGCTACCTGTGGATCCTCCAGATTCACCGGCTCCTCATACAGAGGCGTGGAGGGTGGGTGCTAACTGGATCATTGAAATGGAACAGTACAATGAATGGATGAACGAAGAAGACTTTGAAGTTGATGAAAGTGGCAAAAAGAAAGTCCACAAGTTGCGCATTTCGGTTGATGATGTAATGAGTTTATCTGATCCCTCAAGCAAGAAAGGCAAACCAAAACGTAAACGATCTCCGAGTCCTCCTCCCAAAGGCAAGAGGAAAAGTGGTCGCAGCCCTGCTGTTGTGGTGGGCAAAAAACACAAGGgggataatgatgatgatgatttaaCAAAAGATATAGATGATCCTCCTGCAGAGCCAAATGTGTCTGAAGTTAATGTTAGCAAGCCAGCACTTTCGTCCAAGAAAGATAGTGATCTTCAGCCTGTGAAAGGAGGAACAGTTCATGATTTAGATGATGATGGTGACAAGAATGATGATAGCCAAATGGGGAAAGCTTCCGATACACAGGAAGGGACATTGAAAGATGACCAAGAAGATAATGTCACGGAACAGACTCACCACATTATTATCCCAAGCTATTCTGCATGGTTTGATTACAATGCCATTCATACTGTTGAGAAGAGAGCTCTTCCAGAATTTTTCAATGGCAAGAACAAAAGCAAGACACCAGAAATCTACCTGGCGTACCGCAACTTCATGATTGATACATACAGACTAAACCCCACTGAGTATATTACCAGCACAGCTTGCAGGCGGAACTTGGCTGGTGATGTTTGTGCTATAATGCGTGTTCATGCATTCTTAGAGCAGTGGGGGCTGATCAACTACCAAGTGGATGTTGACAGCCGACCCACTCCAATGGGTCCTCCACCTACCTCCCACTTCCATGTGTTGGCTGACACTCCAAGTGGCCTGCAACCTGTTAACCCACCTAAAACCCCGCAACCCTCTGCTGCTAAGATTCTTTTGGATATGGACAAAAAAGAAATTCCTAAAAAGTCTGATGCTGATCCAGGAAGCATATTTGGTCTTAAACTTGACCAGTATGCACGCAAGCCAGCAGCTCTCCGCAACAAGACTGCTGCAAGCATGACCCGCGACTGGACCTATCAAGAAACACTTCTGCTGCTTGAAGGCCTTGAACTCTACAAGGATGATTGGAACAAAGTTTGCGAACATGTTGGTAGTAGAACACAAGATGAGTGCATCTTGCACTTCTTGCGTCTACCCATTGAAGATCCTTACCTTGAGGACCATGAAGCTGGTGGTGCTCTTGGTCCTCTGGCCTACCAACCAATCCCATTCAGCAAGGCTGGGAACCCAATCATGTCCACTGTAGCCTTCTTGGCATCAGTAGTTGATCCTCGTGTTGCAGCATCTGCTGCAAAGGCTGCAATGGAGGAGTTTGCTAATATCAAGGATGAGGTGCCTGCTAATGTCATTGAGCAACACTTGAAGAGTGTTGAAGCAGCTGTCGCAGAAGGTAAAACTGACCCTGTTGCTGGCCTTCTTATGACTGGTATTGCTGGAACAGAGCCTGAAaaagatgaagaagaaaaagagaagaaggaTGGTGAAAAGTCAAAGGATGATAAGGAAAAGAAGGAAGGAGAAGATGGAGAGAAGGATGGCAAGGAAAAGGATGGAAAAGATAGCAAAGAGGAAGATGAAAAGAACGTTAAAGAAGGGAAAGAAGACTCAAAAGATAAAGAAGCTGAAATTGATGTTGATAAGGCTGCCAAAGGTGCTAAAGAGGATAAGGACAAGGATGTTAAGGATACCAAAACagaagagaaggaaaaagaTACTGATAAGGATGTAGAAATGAAAGATTCTGAAAAAGACACTGATAAAGAAAAGGATGAGCCCATGGATATTGATAAAAAGGAAGGAGATGAAGatgaggaaaagaaagagaaggatGAGGAGAAAATTAAAGATGCCCCAGCCAAGCCAAAGATTGTTAAAGATGCTCAACTTCaatctgctgcagctgccgccctTGCTGCTGCAGCGGTGAAGGCCAAGCATCTGGCTGCCGTTGAGGAGCGCAAAATTAAATCTCTTGTCGCTTTACTCGTGGAAACTCAAATGAAGAAGCTTGAAATTAAACTTCGACACTTTGAAGAGCTAGAAAGCACtatggaaagagaaagagagggtcTTGAGTATCAGCGGCAGCAGCTAATCACAGAAAGACAGCAATTCCACCTCGAACAGTTGAAGGCTGCTGAATTCAGAGCGAGACAGCAAGCTCAGCAGAGATTACAAATGGAGCATGATCAGGGCAGTGTACCTCCAACTTCACCGTTGActcaacaacagcagcaacagcaaacaCAACAATCAATGCAGCAGACTGCTCCTCACCCACAGGCACCTCATTTGCAACCACAGCACCAACAACAACCCTCGCCACAAGCAACCAGTGCTTGA
Protein Sequence: MNILSPKKDGSPNAKFFESPETMSLLDGVKTWLQKNAKKYIQTDPPTNKGLSSLLISLIQFQEDNFGKNAQKPQHTRLPMKLFLDMKPGGALCHILSTMYKFKSEQGWRRFDLQSPSRLERNIEMMGQVEKALSAAKVYSPPHVFVRSDVDKQTAQKVKELVKKHQGNITENEAEASHIIYPVCDPLDEEYARPVLRRDRMVMMHWYYFPDSYDSWNSVELPVDPPDSPAPHTEAWRVGANWIIEMEQYNEWMNEEDFEVDESGKKKVHKLRISVDDVMSLSDPSSKKGKPKRKRSPSPPPKGKRKSGRSPAVVVGKKHKGDNDDDDLTKDIDDPPAEPNVSEVNVSKPALSSKKDSDLQPVKGGTVHDLDDDGDKNDDSQMGKASDTQEGTLKDDQEDNVTEQTHHIIIPSYSAWFDYNAIHTVEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDVDSRPTPMGPPPTSHFHVLADTPSGLQPVNPPKTPQPSAAKILLDMDKKEIPKKSDADPGSIFGLKLDQYARKPAALRNKTAASMTRDWTYQETLLLLEGLELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFANIKDEVPANVIEQHLKSVEAAVAEGKTDPVAGLLMTGIAGTEPEKDEEEKEKKDGEKSKDDKEKKEGEDGEKDGKEKDGKDSKEEDEKNVKEGKEDSKDKEAEIDVDKAAKGAKEDKDKDVKDTKTEEKEKDTDKDVEMKDSEKDTDKEKDEPMDIDKKEGDEDEEKKEKDEEKIKDAPAKPKIVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELESTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAQQRLQMEHDQGSVPPTSPLTQQQQQQQTQQSMQQTAPHPQAPHLQPQHQQQPSPQATSA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00733057;
90% Identity: iTF_00733057;
80% Identity: -