Focc008091.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- DNAJC1
- Assembly
- None
- Location
- ML763461.1:93996-97236[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5 2.8e+03 -1.6 0.1 3 12 20 29 19 39 0.74 2 3 1.1e-08 1.2e-05 25.2 0.1 2 38 298 337 297 344 0.87 3 3 8.2e-08 9e-05 22.4 0.1 3 44 397 443 395 445 0.85
Sequence Information
- Coding Sequence
- ATGCGCTCTGTTACTtatctttttcttattttggcgGGGTGTTGTGTGCTTGCAAGTGCTTGGAGCAATGATGAGTATGAATTGTTTGACTTGGTAGAAGAAGTTAATAAGAACTTCTATGAACTTCTTGAAATACCTAAAGATGCAGGAGCTACAGAAATTCGGAAGGCATTCCGTAAGCTATCCTTGGTGCTTCATCCTGACAAAAATTCAGCCCCTGATGCAGATGTTAAGTTCCGTCAGCTGGTTGCTGTTTACGACGTAATAAAAGATCCTAATAAAAGAAAGCTGTATGATGACGTCCTGGTTAATGGATTACCAGATTGGAAATCTGCAGTTTACTACTATCGAAGAGTACGCAAGATGGGATTAGCGGAAATGTCTGTtatattgtttgttattttgaCTGTTGGACAATATCTTGTTGGATGGGGATCTTACTTGGAGAAGAAGTTCATTGCACAAGAATTTATTTCATCAAAGATGCGGAAGCAGCAGAAGAAAGCAGTCAAGAAAAGTAAAGGAGATGCACCTGTTGTTGAAGAAGTATTGTCAGAGATCCCAATTCCAAGTGTCAAGGACACCCTCCCATTTCAAATTCCTCGTTTCCTTTGGTGGTTAGTTGCCAAACTACCTTTTATTATAGTAGAACAACTGCAGGAACGTAAGCGTTTTCAGGAAGAATTAAGACttatggaagaagaagaaagagctgcagcagaagcagcagctgcagagaAAGCAGGACGTGGACCAAGAAAACGTAAAGGTGGTGGATTTTCTGCTCCTGAAATAACTGGAGATGACAGTTCCGTTCTTACCCAGGCTCAAATTTTAGCCAAGGCTAAGAAAGAGATGAAGTCACAAATGAAAAAGCCTGCTCAAAGTGGCGGTTTGTGGACTGATGAAGATATAGATAAACTTATAAAATTAGTAAAGAAATTTCCAGCTGGTTCACTGGAGCGATGGGAAAAAATTGCAGACGCTATGGAACGTTCAGTTCATGAAGTAACTCACATGGCCCAGAGAGTAAAAGAAGGGCTTTACAAAACACCCAATGCTGAAAGAGAGGGTGAAGGTGAAGTCCAGCATCTTCTTAAAATCAAGAAGGTCAAGACGCGAGGTGGGAAACTGGGGGATTGTGAACCAACTGAAGCCGAAGCCGATTATGAGAGTAAAATGGAATCTTCTTGGAATCAAATCCAACAGAAGGCTCTTGAGGCAGCTTTAATTAAATACCCTAAAGGTTCGACTCAAGATAGATgggaaaaaatagcaaaatgtGTTCCTGATAAGActaagGAGGAGTGCATGATAAGGTTTAAATACCTTGTGGACTTggtgaagaaaaagaaggagaaagagaatgCTCAAACGGTCGAAGAAACCGTCAATACTGAAGATTctgaaaaaacagaagaaactGAAGCCTTAGATAATGAACCTTGTCTTAGCGATGCTTCTAGCTAG
- Protein Sequence
- MRSVTYLFLILAGCCVLASAWSNDEYELFDLVEEVNKNFYELLEIPKDAGATEIRKAFRKLSLVLHPDKNSAPDADVKFRQLVAVYDVIKDPNKRKLYDDVLVNGLPDWKSAVYYYRRVRKMGLAEMSVILFVILTVGQYLVGWGSYLEKKFIAQEFISSKMRKQQKKAVKKSKGDAPVVEEVLSEIPIPSVKDTLPFQIPRFLWWLVAKLPFIIVEQLQERKRFQEELRLMEEEERAAAEAAAAEKAGRGPRKRKGGGFSAPEITGDDSSVLTQAQILAKAKKEMKSQMKKPAQSGGLWTDEDIDKLIKLVKKFPAGSLERWEKIADAMERSVHEVTHMAQRVKEGLYKTPNAEREGEGEVQHLLKIKKVKTRGGKLGDCEPTEAEADYESKMESSWNQIQQKALEAALIKYPKGSTQDRWEKIAKCVPDKTKEECMIRFKYLVDLVKKKKEKENAQTVEETVNTEDSEKTEETEALDNEPCLSDASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00731427;
- 90% Identity
- -
- 80% Identity
- -