Ffus023084.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- DNAJC1
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010001331.1:1528509-1530749[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.9 7.7e+03 -2.1 0.1 3 12 20 29 20 39 0.72 2 3 2.1e-08 2.7e-05 25.0 0.1 2 38 298 337 297 344 0.86 3 3 4.5e-08 5.9e-05 23.9 0.1 3 44 398 444 396 446 0.86
Sequence Information
- Coding Sequence
- ATGCGTTCCGTTATTTATGTCTTCTTAGTCGTTTTGGGTTATTCTGGGCTCACATACGCTTGGAGCAACGACGAGTATGAGTTGTTTGACTTAGTGGAGGAAGTTAATAAGAACTTCTATGAGCTTCTTGAGATACCCAATGATGCTGGTGGTACTGAAATTCGTAAGGCATTCCGTAAGTTGTCTTTGGTGCTCCATCCTGATAAAAATTCAGCCCCTGATGCAGATATCAAGTTCCGTCAGCTGGTAGCTGTTTATGATGTGCTAAAAGATCCGACCAAGAGAAAATTGTATGACGATGTCTTGGTTAATGGCTTACCAGATTGGAAATCTGCTGTTTACTACTATCGAAGAGTGCGAAAAATGGGATTGGCAGAAATGTCCATTATATTATTTGTTATTTTGACAATTGGGCAGTACCTGGTTGGATGGGGGTCATACCTTGAGAAGAAATTTATTGCTCAAGACTTTATATCATCGAAAATGCGAAAGCAAcagaaaaaaggaataaaaaagggaaaaggagatgTACCTGTTGTTGAAGAAGTTTTGTCAGAGATACCAATTCCCAGTATCAAGGACACACTACCTTTCCAAATTCCCCGTTTTCTGTGGTGGCTGGTAGCTAAACTACCTTTTATTATAGCAGAACAGATCCAGGAACGGAAGAGATATCAGGAAGAATTGCGGTTAatggaggaggaagaaaaagcCGCTGCAGAAGCAGCAGCCGCAGAGAAAGCAGGCCGTGGGCCCAGAAAACGCAAAGGTGGTGGGTTTTCTGCTCCTGAAATAAGTGGAGATGACAGCCATGTTCTCTCTCAGGCTCAAATTTTAGCTCAGGCTAAAAGAGAAATGAAGTCTCAAATCAAAAAGCCTGCTCAAAGTGGAGGCTTATGGACTGATGAAGACATAGATAAACTTATAAAATTAGTGAAGAAATTTCCAGCAGGCACATTGGAGCGCTGGGAAAAGATTGCTGATGCCATGGAGAGATCAGTTCATGAAGTAACTCACATGGCGCAGAGAGTGAAAGAGGAGGGCTATAAATCTCCCAACATTGAAAGGAGaGAGGGTGAAGGTGAAGTCCAGCATCTTGTTAAGGCAAAGAAGGTCAAGACTCGAGGAGGCAAGTTGGGGGATTGTGAACCAACTGAAGCTGAGGATGATTATGAGAGTAAGATGGAATCCTCCTGGAACCAGATCCAGCAAAAAGCTCTCGAGGCAGCCTTAATAAAGTATCCTAAAGGTTCTGCTCAGGATCGGTGGGAAAAGATAGCCAACTGTGTTCCTGATAAAACAAAGGAGGAGTGCATGTTAAGGTTTAAATACCTTGTAGACATggtgaagaaaaagaaagagagagaaaatgcgCAAGCTGTTGAAGACACCACTGACGTGGAAGACTCTAGGAAAACGGAAGAGACTGAAGCTGTTGATAATGATCCCTGTTTAAGTGATGCTTCTAGCTAG
- Protein Sequence
- MRSVIYVFLVVLGYSGLTYAWSNDEYELFDLVEEVNKNFYELLEIPNDAGGTEIRKAFRKLSLVLHPDKNSAPDADIKFRQLVAVYDVLKDPTKRKLYDDVLVNGLPDWKSAVYYYRRVRKMGLAEMSIILFVILTIGQYLVGWGSYLEKKFIAQDFISSKMRKQQKKGIKKGKGDVPVVEEVLSEIPIPSIKDTLPFQIPRFLWWLVAKLPFIIAEQIQERKRYQEELRLMEEEEKAAAEAAAAEKAGRGPRKRKGGGFSAPEISGDDSHVLSQAQILAQAKREMKSQIKKPAQSGGLWTDEDIDKLIKLVKKFPAGTLERWEKIADAMERSVHEVTHMAQRVKEEGYKSPNIERREGEGEVQHLVKAKKVKTRGGKLGDCEPTEAEDDYESKMESSWNQIQQKALEAALIKYPKGSAQDRWEKIANCVPDKTKEECMLRFKYLVDMVKKKKERENAQAVEDTTDVEDSRKTEETEAVDNDPCLSDASS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733056;
- 90% Identity
- -
- 80% Identity
- -