Focc002944.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Frankliniella occidentalis
Gene Symbol
Kdm5
Assembly
None
Location
ML763197.1:509696-518311[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-16 8.8e-13 48.3 0.2 2 89 109 201 108 201 0.81

Sequence Information

Coding Sequence
ATGCCTCCCCAGGGGATGAAACATGTGAACGGGAAAGCGAAAGgaatGGCGAGCAAAGTTGCTGACAAGGCAGGGAAAGCCCTTCCAGCTGAAGATTGGAAGTTCACTCCACCACCTGAGGCTCCAGTGTTCGAGCCTACTCCAGAAGAATTTGAAGATCCTTTGGCATATATTGCCAAAATCAGGCCAATTGCTGAAAAAGCAGGTATCTGCAAAATAAGGCCACCCAATGACTGGCAACCTCCATTTGCAGTTGATGTTGATAAGTTTAAGTTTACTCCTCGAATACAGAGGTTAAATGAACTGGAAGCAAAGACCAGAGTTAAACTGAACTTTTTTGATCAGATTGCAAAGTTTTGGGAACTACAAGGGTCAACCCTCAAAATTCCCATGATTGATAGGAAAGCTCTGGATCTCTATACCCTGCATCGTTATGTGCTACAGTTAACAAATGATAACTACGAAGGATTTGTCAGGCAGAAAGATAAAGCTGCCCAAGAGCAATTGTGGTCTGACATAGCAATGAAAATGGGATATCCTCCTAAAAGAGGCCACTATTTGCTCTTAAAGCATCACTATGATCGAATTTTACGACCATATGACATATTTTTGAAACATCCACCTACAGAAAACTTAGCAAAGCCTAAAAGAGAAGTGAAGGCTGAACCAAAATTGGAACCTAAAGCTGAAACTAAGGTAGAAGCAAAGTCTGAACCCAAGTCTGATGACGATGAAGAGGGTGAAGAGTACAAGCAACATCAGATTCCAAGCCGTCAAGCCATTGAGCCACCAGCAAGCCAAAAGTCAGCTAGGCGTTCTAAGCGTTATGGTACCTGTGACCCTGTCAAAGATGGACAAGATCCAACCTCACCAGACAGCAAGGAACTTCGCAGACTTCTCTTCTATGGAGCAGGTCCTAAGATGGCTGGCTACAATGAGAAGCAGTCTCCCAAAAAGAAAAACTCCAAGAAAGGGGGTCATGAATATGATCCCTTGGCAAAGTATGTGTGCCAGACATGTGAAAGGGGTGATGCCGAAGAAAGTATGTTATTATGTGACGGATGCGATGACAGTTATCATACTTTCTGTCTGGTTCCTCCTCTGAGTGAGATTCCAAAAGGTGACTGGCGCTGTCCTAAATGTCTAGCTGAAGAAGTTAGCAAACCATTGGAAGCCTTTGGTTTTGAACAGGCTCAACGAGAGTATAGTCTTCAGCAGTTTTGTGAAATGGCAGATCGTTTTAAATCGGAATATTTCAATATGCCTGTGCATGTTGTACCAACATCTTTGGTTGAAAAAGAATTTTGGAGATTGGTGTCCTCTATTGATGAAGATGTTACTGTTGAGTACGGAGCGGATTTGCATACCATGGATCATGGCTCTGGCTTTCCCACAAACTCCAGTGACACAACATGTGAATATGCCAAATCTAATTGGAATCTCAATAATCTTCCAGTTTTGGAAGGTTCAGTTTTAGGACATATAAATGCTGACATATCTGGCATGAAAGTTCCATGGATGTATGTTGGAATGTGTTTTGCCACTTTTTGCTGGCATAATGAAGACCATTGGAGTTATTCCATCAATTATTTGCATTGGGGTGAACCCAAAACATGGTATGGTGTACCTGGAAGTTCAGCTGAAGCTTTTGAAGACACCATGAAACAAGCAGCCCCTGAATTGTTTCAGTCACAACCTGATCTCCTCCACCAGCTGGTGACCATAATGAACCCCAATATTCTCATGAATGATGGAGTGCCAGTATTTCGCTGTGACCAGCACGCAGGGGAGTTTGTCGTGACCTTCCCCCGTGCTTACCATGCTGGCTTTAACCAGGGTTTCAACTTTGCTGAAGCTGTTAATTTTGCTCCTGCTGATTGGTTGTCATTAGGAAGGAATTGCATTACTCACTACTCAAATTTGAGACGGTTCTGCGTCTTCTCCCATGATGAATTGGTGTGTGGAATGGCATCAGATCCTAAGGAGCTGGAGCTTGGTGTTGCAGCAGCGGCTTATCAAGACATGAGTGTGATGGTGGAAAGTGAGAAGAAATTAAGAAAGTCTCTCTTGGAATGGGGAGTGCGCACAGCTGAGAGGAAGAATTTTGAATCAATGCCAGATGATGAAAGACAGTGTGAGGTATGTAAAACCACTTGTTTTTTGTCAGCAGTGACTTGTGATTGTGAAACTGCTAATCCCAAGGGCCAGCAACGTCTACTCGCATGTCTGAGACATTACACTGATCTCTGCTCCTGTGATCCAACAAGCCATACTCTTTGGTATCGGTACACATTAGATGAGCTTCCTCTCATGCTTCGGGATATCAAGCTAAGGGCTGAATCTTTTGATAATTGGGTGTCCTCAGTTAAAGACGCTCTAGACTTCAACACACCAAAAACACTGGACCTTGCAGGATTCAAAGCTCTATTACAAGAGGCAGAAGATAAGAAGTTTCCAGACTCCGAACTATTGCAAGCTCTACGAGTTTCTGTCCAGGAAGCAACTAAATGCGCAAATGTTGCATCTCAACTTGGTGGCAGAAAAACTCGCAACCGTACTCGTACTTCTCAAGAACCAAGACTGAAGCTTACTGTGGAAGAGCTGCAGTTGTTTGTAGAAGAAATTGATGAGCTTCCTTGTATTCTACGGGATGGTGCTGCTGTGAAAGATGTTTTAGAGAAAGTAAAGGAGTTTCAAACAAAAGCAGCTGCTTTAATGAGCAAGGAGCCTAATATAGAAgtgagaagaggaaaagaagttCGTGAAGTTTTAGAACTTGGTCTTAATCTGGACGTCGAATTGACAGAACTTTCACCACTGAAAGACTTGTGTCTTCAAGAGGAATGGTTAGACAAGGCTGTAAGACTCCAAAATGCAGCAGCTGCCGACCTCGATGAGGTGACTTCTTTAGTGGCAGCCTGTGATGATCTGCCCACCCCAAGGCATCCAGTCTTGACACAGCTTCTGGAGGAATTTTCAGAACTTGAGTCAAGAGCATTAAATTGGCAAACTCGTGCTAAGACTGCGATTCAAGAAGCATCTCTTGAAAAGCTGGAGAGCTTAGATCATGAGGCTGAAGAGATGTCAGTATTTGTTCCTGAAATGAACGAGGTTGAGGATGCTGTGAAGACAGCTGCTAAGTGGAAAGTTCAAGCTGCTGAACTTCAGGCTGTGCCTGATGGTCCTGAGCTAGAGCTAGTGGAAGCCCTTGTTTTGAGAGGGCAAGCGTGTCCAGCAAGACCCCCAGGCTTGGCTGAATGGGAAGAACGCATACGAAATGCTCGTACTTGGCGGGAGAAGACTTTCCGCACCTTTATGTTCCGTGATTCACCTTTGTCTCTTGTGGAAGCACTTCTTCCTCGCACAGAGGTTGGAGTTGATAGTGAACCTGTCAAGAAAGACAAAGATCCAGTTAAAGATGAAACAGCAGCAGTTTTGGATATTCAAGAAACAAACACCCAGAAAAGGCTTAAAGATTTAGGTGATAAAACCTACTGTATTTGCAAGAAACCATTTGCAGGTGTCATGGTAAAGTGTGAAATCTGCTACGATTGGTTCCATGCCAGATGTGTACCACTCCCAGAGAAAAATGATACAATGGCACCAACAATGGAGGACCGCATTCGAGCAGTTACTTCTCGTCAAGTAAAGTTCCTATGTCCTGTATGCCAGCGCTCCAAGAGACCTCAGTTCAAAGCAGTATTTCAACTGCTTTCTAATATTCAAAAGCTGGGTGTGCAGATGGTTGAGGCACGAGTTGTTCATAGCCTATGCCAACGAGCCCTTAACTGGAAAGAGAAAGCCCGGAAGATGCTCTCACAAGAGGACTTGTACGCACCTTCTCCGTCAATCGGGGAGCACACATACTCTGCATTGTCTCCAAGTAAGCACATGAGGAAGTCTCCTTTAGTTCCCAGGCAGGAGAAACCTTCATCAGTTCTCCTTGACAAGTCTAGAATTCAGTTGGAGCTGTTAATGCTTGAGGGCGATCTTATGGAATTAGATCTGGAAGAGAGTTCTGTCATATGGAACGTTCTCAGAAATTCAGAAGCTAATGCAGAAAGCTCCGCTGTGGAACCTGATGAGCTTGATGTCAGAGTGGAAGCAGAAGCAAGTCAAGAAAACAAATGTAAGGAGTTGGAACGTTTCAGGGACAAACAAAGGCGAATGAAGCGCAAAGCTGATGATGACAAGAGCCGTAGGCGTGGTGGCAAACCTAAACGAGCAAAGAAACCAGCTCGTCCTGTAAATCAGGAAGTCTCCAATGACAAATCAgctgcggagggggaggaggaagaagaggatgaagacTGTTCAGCAATGCCCTGTTTGAGACCGACTGGTTGTGAGGTCACATGGGTGCAGTGTGATGGGGCTTGTGAGTTGTGGTTCCATTTGCATTGTGTAGGACTTGACAGAGGTGATATCTCGGAACAAGAAGACTATATTTGTTCTCAATGTAATGGGCCGAATCCAGAGCAGCGCATGCAAATAATTGGCGCAATGGATACAACAATACCCCTTGCACATGAACCTTCACTTCTTGCAACACCCCCACACAGTAGAAATCCAACATAA
Protein Sequence
MPPQGMKHVNGKAKGMASKVADKAGKALPAEDWKFTPPPEAPVFEPTPEEFEDPLAYIAKIRPIAEKAGICKIRPPNDWQPPFAVDVDKFKFTPRIQRLNELEAKTRVKLNFFDQIAKFWELQGSTLKIPMIDRKALDLYTLHRYVLQLTNDNYEGFVRQKDKAAQEQLWSDIAMKMGYPPKRGHYLLLKHHYDRILRPYDIFLKHPPTENLAKPKREVKAEPKLEPKAETKVEAKSEPKSDDDEEGEEYKQHQIPSRQAIEPPASQKSARRSKRYGTCDPVKDGQDPTSPDSKELRRLLFYGAGPKMAGYNEKQSPKKKNSKKGGHEYDPLAKYVCQTCERGDAEESMLLCDGCDDSYHTFCLVPPLSEIPKGDWRCPKCLAEEVSKPLEAFGFEQAQREYSLQQFCEMADRFKSEYFNMPVHVVPTSLVEKEFWRLVSSIDEDVTVEYGADLHTMDHGSGFPTNSSDTTCEYAKSNWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSSAEAFEDTMKQAAPELFQSQPDLLHQLVTIMNPNILMNDGVPVFRCDQHAGEFVVTFPRAYHAGFNQGFNFAEAVNFAPADWLSLGRNCITHYSNLRRFCVFSHDELVCGMASDPKELELGVAAAAYQDMSVMVESEKKLRKSLLEWGVRTAERKNFESMPDDERQCEVCKTTCFLSAVTCDCETANPKGQQRLLACLRHYTDLCSCDPTSHTLWYRYTLDELPLMLRDIKLRAESFDNWVSSVKDALDFNTPKTLDLAGFKALLQEAEDKKFPDSELLQALRVSVQEATKCANVASQLGGRKTRNRTRTSQEPRLKLTVEELQLFVEEIDELPCILRDGAAVKDVLEKVKEFQTKAAALMSKEPNIEVRRGKEVREVLELGLNLDVELTELSPLKDLCLQEEWLDKAVRLQNAAAADLDEVTSLVAACDDLPTPRHPVLTQLLEEFSELESRALNWQTRAKTAIQEASLEKLESLDHEAEEMSVFVPEMNEVEDAVKTAAKWKVQAAELQAVPDGPELELVEALVLRGQACPARPPGLAEWEERIRNARTWREKTFRTFMFRDSPLSLVEALLPRTEVGVDSEPVKKDKDPVKDETAAVLDIQETNTQKRLKDLGDKTYCICKKPFAGVMVKCEICYDWFHARCVPLPEKNDTMAPTMEDRIRAVTSRQVKFLCPVCQRSKRPQFKAVFQLLSNIQKLGVQMVEARVVHSLCQRALNWKEKARKMLSQEDLYAPSPSIGEHTYSALSPSKHMRKSPLVPRQEKPSSVLLDKSRIQLELLMLEGDLMELDLEESSVIWNVLRNSEANAESSAVEPDELDVRVEAEASQENKCKELERFRDKQRRMKRKADDDKSRRRGGKPKRAKKPARPVNQEVSNDKSAAEGEEEEEDEDCSAMPCLRPTGCEVTWVQCDGACELWFHLHCVGLDRGDISEQEDYICSQCNGPNPEQRMQIIGAMDTTIPLAHEPSLLATPPHSRNPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01434735; iTF_00731252;
90% Identity
iTF_00731252;
80% Identity
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