Ffus021913.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Frankliniella fusca
Gene Symbol
Kdm5
Assembly
GCA_029379305.1
Location
JAHWGI010001288.1:214330-220170[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-16 1.1e-12 48.9 0.3 2 89 109 201 108 201 0.81

Sequence Information

Coding Sequence
ATGCCTCCCCAGGGGATGAAACATGTGAACGGGAAAGCTAAAGGGATGGCGAGCAAAGTAGCTGATAAGGGAGGGAAAGCCCTCTCAGCTGAAGATTGGAAGTTCACTCCTCCTCCGGAGGCTCCAGTATTTGAGCCAACATTAGAAGAATTTGAAGACCCTCTAGCATATATTGCAAAAATCAGACCCATTGCTGCAAAAGCTGGCATATGTAAGATTAGACCTCCAAACGACTGGCAGCCACCCTTTGCTGTTGATGTTGATAAATTTAAGTTTACTCCCCGAATCCAGAGGTTAAATGAACTTGAAGCAAAGACCAGAGTCAAGCTTAACTTCTTTGATCAGATTGCCAAGTTTTGGGAGCTTCAAGGGTCAACCCTTAAAATTCCCATGATTGACAGAAAAGCTCTGGACCTATACACCCTACATCGTTATGTTATTCAGTTTACAAAAGATAACTATGAAGGGTTTGTGAAGCAGAAAGACAAAGCTGCCCAGGAGCAATTGTGGTCTGAAATTGCCTTGAAAATGGGTTATCCTCCAAAGAGAGGCCATTATTTGCTCTTGAAACATCACTATGATCGTATTTTGAGACCTTATGATATCTTTCTGAAGAATCCACCAGCAGAAAATATGGCAAAGCCGAAGAGAGAGGTAAAGGTTGAACCAAAACTGGAACCTAAAGTAGAACCGAAAATAGAAGGCAAGTCTGAACCTAAAtctgatgaagatgaagagggTGAAGAATACAAGCAACATCAGATTCCAAGCCGTCAAGCTATTGAACCACCAATGAGCCAAAAATCTGCCAGGCGTTCCAAGCGTTATGGCACCTGTGATCCTGTTAAAGATGGGCAAGAATCAACCTCCCCAGATAGTAAAGAATTACGCCGGCTTTTGTTTTATGGTGCTGGACCTAAAATGGCTGGCTACAATGAAAAGCAGTctcctaaaaagaaaaatttgaagaaaGGAGGACATGAATATGATCCCTTAGCAAAATATGTGTGCCACACTTGTGAACGAGGTGATGCTGAAGAAAGTATGCTTTTATGTGATGGCTGTGATGACAGCTATCACACTTTCTGTCTAACTCCTCCTCTGAGTGAAATTCCCAAAGGCGATTGGCGTTGCCCAAAATGTCTTGCTGAAGAAGTCAGCAAACCACTGGAAGCCTTTGGTTTTGAACAGGCACAAAGAGAATACAGTCTTCAGCAGTTTTGTGAAATGgcagatcgtttcaaatctgAATATTTTAATATGCCTGTACATGTTGTGCCAACTTCTTTGGTTGAAAAAGAATTTTGGAGATTGGTGTCCTCAATTGATGAAGACGTCACTGTAGAATATGGTGCTGATTTGCATACAATGGATCATGGCTCTGGTTTTCCTACAAATTCTAGTGACACCACCTGTGAATATGCCAAGTCTAAATGGAATCTCAACAATCTTCCAGTGCTGGAAGGTTCAGTCCTAGGACACATCAATGCCGATATATCTGGCATGAAAGTTCCATGGATGTATGTCGGTATGTGTTTTGCCACGTTTTGTTGGCATAATGAAGACCATTGGAGTTATTCCATAAACTACTTGCATTGGGGTGAACCCAAAACGTGGTATGGTGTGCCGGGAAGTTCAGCTGAAGCTTTTGAAGATACCATGAAAAGAGCAGCTCCTGAATTATTTCAGTCACAGCCTGATCTTTTGCACCAGCTGGTGACCATAATGAACCCTAACATCCTCATGAATGATGGAGTACCAGTATTTCGCTGTGACCAGCATGCAGGGGAATTTGTTGTCACCTTCCCACGTGCTTACCATGCTGGTTTCAACCAGGGCTTCAACTTTGCTGAGGCTGTCAATTTTGCTCCTGCGGATTGGTTATCATTGGGAAGAGATTGCATCACACACTACTCAAATTTAAGGCGATTCTGTGTTTTCTCACACGATGAATTGGTGTGTGGAATGGCATCAGATCCGAAAGAGCTAGAGCTTGGTGTTGCAGCTGCGGCATACCAAGACATGAGTGTAATGGTGGAGAGtgaaaagaaattaagaaagtCGCTTTTGGAATGGGGAGTGCGCACTGCCGAAAGAAAGAATTTTGAATCAATGCCTGATGATGAGAGGCAGTGTGAGATATGTAAAACAACTTGTTTCTTGTCAGCAGTAACTTGTGATTGTGAAGCTGCAAACCCCAAAGGCCAACAACGGTTACTTGCATGCCTGAGACACTACACCGATCTCTGCTCCTGTGATCCAACAAGACATACCCTTTGGTATCGGTACACATTGGATGAGCTCCCCCTGATGCTTCGTGATATCAAGCTCAGGGCTGAGTCATTTGATAATTGGGTTTCCTCAGTTAAAGATGCTCTTGACTTCAATACACCAAAGACATTGGACCTTGCAGGATTCAAAGCTCTGCTGCAAGAAGCTGAAGATAAGAAGTTTCCAGATTCAGAACTGCTGCAAGCTCTCCGAGTTTCTGTTCAAGAAGCAACTAAATGTGCAAACGTTGCCTCTCAACTGGGGGGCAGGAAGACTCGCAATCGCACTCGTACTTCTCAAGAACCAAGACTGAAGTTGACTGTGGAGGAACTACAGTTGTTTGTTGAAGAAATCGATGAGCTGCCTTGTATCTTAAGAGATGGTGCCGCTGTGAAAGATGTCTTGGAGAAAGTCAAGGAGTTTCAGACAAGAGCTGCAACTTTAATGAGCCAGGAGCCTAATATAGAAGTGAGAAGAGGCAAAGAAATTCGAGAGGTTTTGGAACTTGGTCTCAACTTGGATGTTGAGTTATCAGAACTCACACCGCTCAGAGATTTGTGTCTTCAAGAAGAATGGCTGGACAAGGCAGTCAGAATCCAAAATGCAGCAGCTTCTGATCTTGATGAAGTTACTTCACTAGTTGCAGCCTTTGAAGAGTTACCCACTCGAAGACATCCAGTCTTGACACAACTTCATGAGGAATTTGCAGAACTGGAGTCTAGGGCCTTAAATTGGCAGACCCGAGCAAAGTCTGCAATACAGGAGGCATCACTTGAAAAGCTAGAGAGTTTAGATCATGAGGCAGAAGAAATGTCAGTATTTGTTCCTGAAATGAATGAGGTGGAAGATGCTGTGAAGACTGCAGCAAAATGGAAAGTTCAAGCTGCTGAACTGCAGGCTGTACCCGATGGCCCAGAGCTAGAACTGGTGGAAGCCTTAGTTTTGAGAGGCCAGGCATGTCCAGCAAGACCGCCAGGCTTGGCCGAATGGGAAGAGCGTATTCGAAACGCTCGTACTTGGAGGGAAAAGACTTGTCGCACCTTTATGTTCCGTGACTCTCCCTTATCCCTTGTGGAAGCCCTTCTTCCTCGAACTGAGGTTGGCGTTGATGGTGTACCAGTGAAAAAAGACAAAGATCCAGTCAAAGATGAAACTGCAGCAGTTTTGGATATTCAAGAGACTAACACACAGAAAAGGCTGAAAGACACCGGGGACAAAACTTATTGCATTTGTAAAAAATCCTTTGCTGGTGTCATGGTCAAGTGTGAAATATGCTATGATTGGTTCCATGCCCGCTGTGTGCCGCTGCCAGAGAAAAATGATTCAGCCACTCATTTGACTATGGAAGACCGCATTCGAGCTGTGACCACTCGCCAAGTCAAGTTCCTATGCCCAGTTTGCCAGCGCTCTAAGAGGCCACAGTTCAAAACTGTTTTTCAATTGCTTTCTAATATTCAAAAGCTAGGTGTGCAGATGGTCGAGGCACGTGTTCTTCATAGTCTATGTCAACGAGCTCTTAATTGGAAAGAAAAAGCTCGCAAGATGCTTGCCCAAGATGACTTGTATGCAGCCTCCCCAGCTATTGGAGAACACACATACTCTCAACTCTCTCCCAGCAAGCACATAAGAAAGTCTCCATTAGTTCCCAGGCAAGAGAAACCCTCATCAATTCTTCTTGACAAGTCAAGAATTCAGCTGGAGCTGTTAATGCTTGAAGGTGATCTTATGGAGTTAGACCTGGAAGAGAGCTCTATCATTTGGAATGTTCTCAGAAATTCTGAAGCTAGTGCTGAAAGCTCTTCTCTGGAGCCAGATGATCTTGATGTAAGAGTGGAAGCAGAGGCAAGTCAAGAAAACAAGTGCAAAGAATTGGAGCGGTTCAGAGATAAACAGAGGCGAATGAAGCGCAAAGCAGATGATGACAAAAGCCGTAGGCGTGGAGGTAAACCAAAGCGTGCAAAGAAGCCAGCACGCAATATCAATCAAGAAGTCTCCAGTGACAAATCAGCTGCTGAcggtgaagaggaggaggaagatgaagacTGCTCGGCAATGCCCTGTTTGAGACCAACTGGCAGTGAGGTCACCTGGGTGCAGTGCGATGGAGCTTGTGAGTTATGGTTCCACTTACATTGTGTTGGACTTGACAGAGGAGATATCTCAGAACAAGAAGACTATATTTGTTCCCAGTGTAATGGACCAAACCCAGAGCAGCGAATGCAAATAATTGGTGCAATAGATACATCAGTACAGCTTGCACATGAACCTTCTCTTCTTGCAACACCTCCACAAATTAGAAATCCAACATAA
Protein Sequence
MPPQGMKHVNGKAKGMASKVADKGGKALSAEDWKFTPPPEAPVFEPTLEEFEDPLAYIAKIRPIAAKAGICKIRPPNDWQPPFAVDVDKFKFTPRIQRLNELEAKTRVKLNFFDQIAKFWELQGSTLKIPMIDRKALDLYTLHRYVIQFTKDNYEGFVKQKDKAAQEQLWSEIALKMGYPPKRGHYLLLKHHYDRILRPYDIFLKNPPAENMAKPKREVKVEPKLEPKVEPKIEGKSEPKSDEDEEGEEYKQHQIPSRQAIEPPMSQKSARRSKRYGTCDPVKDGQESTSPDSKELRRLLFYGAGPKMAGYNEKQSPKKKNLKKGGHEYDPLAKYVCHTCERGDAEESMLLCDGCDDSYHTFCLTPPLSEIPKGDWRCPKCLAEEVSKPLEAFGFEQAQREYSLQQFCEMADRFKSEYFNMPVHVVPTSLVEKEFWRLVSSIDEDVTVEYGADLHTMDHGSGFPTNSSDTTCEYAKSKWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSSAEAFEDTMKRAAPELFQSQPDLLHQLVTIMNPNILMNDGVPVFRCDQHAGEFVVTFPRAYHAGFNQGFNFAEAVNFAPADWLSLGRDCITHYSNLRRFCVFSHDELVCGMASDPKELELGVAAAAYQDMSVMVESEKKLRKSLLEWGVRTAERKNFESMPDDERQCEICKTTCFLSAVTCDCEAANPKGQQRLLACLRHYTDLCSCDPTRHTLWYRYTLDELPLMLRDIKLRAESFDNWVSSVKDALDFNTPKTLDLAGFKALLQEAEDKKFPDSELLQALRVSVQEATKCANVASQLGGRKTRNRTRTSQEPRLKLTVEELQLFVEEIDELPCILRDGAAVKDVLEKVKEFQTRAATLMSQEPNIEVRRGKEIREVLELGLNLDVELSELTPLRDLCLQEEWLDKAVRIQNAAASDLDEVTSLVAAFEELPTRRHPVLTQLHEEFAELESRALNWQTRAKSAIQEASLEKLESLDHEAEEMSVFVPEMNEVEDAVKTAAKWKVQAAELQAVPDGPELELVEALVLRGQACPARPPGLAEWEERIRNARTWREKTCRTFMFRDSPLSLVEALLPRTEVGVDGVPVKKDKDPVKDETAAVLDIQETNTQKRLKDTGDKTYCICKKSFAGVMVKCEICYDWFHARCVPLPEKNDSATHLTMEDRIRAVTTRQVKFLCPVCQRSKRPQFKTVFQLLSNIQKLGVQMVEARVLHSLCQRALNWKEKARKMLAQDDLYAASPAIGEHTYSQLSPSKHIRKSPLVPRQEKPSSILLDKSRIQLELLMLEGDLMELDLEESSIIWNVLRNSEASAESSSLEPDDLDVRVEAEASQENKCKELERFRDKQRRMKRKADDDKSRRRGGKPKRAKKPARNINQEVSSDKSAADGEEEEEDEDCSAMPCLRPTGSEVTWVQCDGACELWFHLHCVGLDRGDISEQEDYICSQCNGPNPEQRMQIIGAIDTSVQLAHEPSLLATPPQIRNPT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00732899;
90% Identity
iTF_00732899;
80% Identity
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