Focc015615.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- ARID5B
- Assembly
- None
- Location
- ML763395.1:59363-67877[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-25 3.2e-22 78.6 0.0 2 89 221 306 220 306 0.95 2 2 2.9 8e+03 -2.8 0.1 19 35 412 428 407 428 0.76
Sequence Information
- Coding Sequence
- ttgtttcaGCATGAAGTGCTTGCAATATCCGACCGAGTTGTCATACGATGTGAGGATTTACTGACATGGCTCACCGAGGATGCATCATGGAGCTGGGGTCTCCCAGCAGTTTGGGACAAAGACTGCTCTGGATTAAGCAATGGTCCTCCAACAACTACAAGATTACAAGCTCTCAGCGATACCTGCATGGACTTTACAGAcattgaagaagaaaaatttaaattagATCCCTCAACATGGGACAATTGTGGAGTTGTTGTTTTGAGCTTTCCTCGTTATTGCCGTTACCGAGCCCTTATGAAACGGCTGGAAGGTGTACCAAACAAGTGGCTTAGAAACTCTTTGGTCACTGCTCTGGGAGGATTTTCAGTACCTTGCAGAGACACTCGTGTTCTATTCTGCAAAGACACTTTTGATTATCCTGACCTCGAAGGGCATGAGTTACTGTGTAATCATCTAGCCCCCAAAATAAATCTTCgctcaaagaaaaagaaaaagaaacagtcCACATCACCAGGGGAAACTGATTCGAATGAATCAGAGTCTTCCCTCTCTACCATATCATCATCAACAAAAGACAAAAGACCTAATCGGAGTAGAAATGGCTTACAATACGATCTTTCACAACCCAACCGGAGGCATAAATCCCAGAGCCAGGAAGAGAAAATGTTCTTGGATAGGTTGCACCATTTCATGAATGATAGACAAACCCCTATTGGAAAAGTACCAATGTTAGGATTTAAAGAAAtggATCTCTACAAGTTTTTCTCTAAAGTACAACATTTGGGGGGTTATGACAATGTATCAGCAAATCGAATGTGGCCTCGAGTGTTTGATGAAATGGGTGGTGACCCTGCTAATACCAGTGCAACTACTCATTCAAAACGACATTATGAAAGATTACTTCTTCCATATGAAAGAAAACTACGATCTGATGCCCTATCAAGAGCTGGAATAAGTAGTCAGGATTATGAGGCCTGGATAGAGTCATTAACCAGTGCTGCTGATCTAAAGGATGGTGAAGAAatagaaagaagaagaaaaatgttgaTAGAGGGAACAACAGCAGCTCTAAGAAGTATACGCTTAAAACCAGAAAAATCTTCGGATCTCACAGGGAAAGAAAACATACCAATTTTAAGACTTTCAGAACTTGCTGATCCATCAAGATCTGTTCATTCACCTGAAGTTATTGTTTTGGATTCTGAGTCGGAAACTCCAATCAAAAATATTACAACTCCTATGGTCCCTGTATTGAAAAAACGAAAATTGGATATGCTAAAAGAAGGTGGCTTAGAGGTAACACCTATTGGATCTCCTGGATCATCTAGTTCAGGTCAGACTGATGCTACAGCAAATGTCAAACCAGCTGCAAGCCCAGAAACACCTCCTGGGGAAGTTTCAATTATGGTGACACCAGATCTAAGTCACATGCTTGGCTCACCCAAAGCTGGGTCTCCAGAGACCTGTGCTTCTCCTTTGGATTCTGCACAATCATCGCCTGCCAACCCACGAACAGTTATAAACGTCCAAGACCTCAAAAATTCACCACTTCTGATGTATCCTGGTGTGACAGCAAGTCAAAATGGAAGAAGTGACCAATCACCTCCGAAAGTAACTCAGTCTCGATCAATTTATGCTAATTCTGCTCTTGGTGGACCATGGTATGGCAACCCAAAAGACTATCCAAGACCAGGAGGCAATTCAAACACTGCAAGCACTAATACTGATACACCACCTATTGCAAGGTCACTTCAGGCAGCTCTTCGTGTTGCAAACAAATCAAACTCAGGTGGTAGTTCGCCTgttggcagtggcagtggcagtggaaGTGTCAGTGGTATAGATGTTCTAGACTTAAGAATGAAAGGTGAAAAGCCTGCGGTTGAAATAGTGCGTGTTATGCCCAGTGTTAGTGCACCCCCACCAAGACAAGCACCCATCAGGGATTCTGGCAGAGCTAATGTCCCTCCTCAAGTGCTTCCCTCGTCTATCGGCCGTACCACTGTTGGATCTAATTTAGAAATCACCCTAGTGCAAAATCCAAAACTTGCAATTGCAAAACTGcagcaggaacaaagaaatgtGTTATTACAACAAAGAAGAGTAGCACAACAGCAAGCAAAAGCTTCTGCTCCATCAAGTAGACCTTCACCTAGGATTGAAAATGGAAGACCTCACTCTGTCGCAACATCAACGTCTAATACAAGTAGAAGTAGACCCCCCTCTGTGAACAACACCCCTTCATCTTCAAGCCTTGTGATCCCCTCCCCGTATGTATTAGGCAACAATAGTAATAGTAGCAGCACAAATAGTAGCAACAGTAGTAATAATAGTAAACGAAGGAACTCAAATGATCAAAGATCACGGGCAAGCACTAATACTCCTACTTCTTCTGCTCCTACAAATCCATACTTCTCTGGAGCAGCAGCAAACTTATTTCCTAACTTACTCCAAAATCTTCCCACTGGTTCTGCAGCTGCTGGAAAAAATGCATTCTTACCAGCACTTGATTTAATGTATTATCAAGCATTGTGTAATCCTCAGCTATATAATCCTGCTGCAGCATCAGTACTACCTATGTCTGGGTTACCCATGTCCACGCCCCAGCATTACATGCCAACTGAAGAGCAGTTTCAGctgtataaaaatattttgagtcATCAACTAAAATCAAACCCTGCTCAGGCCAGTGAGGATATTGCGCGATTATTACAGGATGGTTCCACTTCCATTACCCTTGTTGGTAATTCTAAAAACCCCACTTCCAAATGA
- Protein Sequence
- LFQHEVLAISDRVVIRCEDLLTWLTEDASWSWGLPAVWDKDCSGLSNGPPTTTRLQALSDTCMDFTDIEEEKFKLDPSTWDNCGVVVLSFPRYCRYRALMKRLEGVPNKWLRNSLVTALGGFSVPCRDTRVLFCKDTFDYPDLEGHELLCNHLAPKINLRSKKKKKKQSTSPGETDSNESESSLSTISSSTKDKRPNRSRNGLQYDLSQPNRRHKSQSQEEKMFLDRLHHFMNDRQTPIGKVPMLGFKEMDLYKFFSKVQHLGGYDNVSANRMWPRVFDEMGGDPANTSATTHSKRHYERLLLPYERKLRSDALSRAGISSQDYEAWIESLTSAADLKDGEEIERRRKMLIEGTTAALRSIRLKPEKSSDLTGKENIPILRLSELADPSRSVHSPEVIVLDSESETPIKNITTPMVPVLKKRKLDMLKEGGLEVTPIGSPGSSSSGQTDATANVKPAASPETPPGEVSIMVTPDLSHMLGSPKAGSPETCASPLDSAQSSPANPRTVINVQDLKNSPLLMYPGVTASQNGRSDQSPPKVTQSRSIYANSALGGPWYGNPKDYPRPGGNSNTASTNTDTPPIARSLQAALRVANKSNSGGSSPVGSGSGSGSVSGIDVLDLRMKGEKPAVEIVRVMPSVSAPPPRQAPIRDSGRANVPPQVLPSSIGRTTVGSNLEITLVQNPKLAIAKLQQEQRNVLLQQRRVAQQQAKASAPSSRPSPRIENGRPHSVATSTSNTSRSRPPSVNNTPSSSSLVIPSPYVLGNNSNSSSTNSSNSSNNSKRRNSNDQRSRASTNTPTSSAPTNPYFSGAAANLFPNLLQNLPTGSAAAGKNAFLPALDLMYYQALCNPQLYNPAAASVLPMSGLPMSTPQHYMPTEEQFQLYKNILSHQLKSNPAQASEDIARLLQDGSTSITLVGNSKNPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00731249;
- 90% Identity
- iTF_00731249;
- 80% Identity
- -