Ffus015973.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- Arid5b
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010001056.1:118534-121793[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-25 9.7e-22 78.0 0.0 2 89 219 304 218 304 0.95 2 2 5.7 1.6e+04 -2.9 0.1 20 35 411 426 404 426 0.75
Sequence Information
- Coding Sequence
- ATGTTTCAGCATGAAGTGCTCGCAATATCCGACAGAGTTGTCATAAGGTGTGAGGATTTATTGACATGGCTCACCGATGATGCATCATGGAGCTGGGGCCTCCCAGCAGTTTGGGATAAAGACTGTTCTGGAGTGAGCAATGGGGTTCCAACTACCACAAGATTACAGGCTCTCAGTGATACCTGTTTGGACTTCTCAGACattgaagaagaaaaattaaaattagATCCTTCAACATGGGACAATTGTGGAGTAGTTGTTTTAAGCTTTCCACGGTATTGTCGTTATCGAGCCCTTATGAAACGCCTTGAGGGAGTGCCGAACAAGTGGCTAAGAAACTCTTTGGTCACAGCTCTTGGAGGATTTTCAGTGCCTTGCAGGGATACTCGTGTTCTTTTCTGTAAAGATACATTCGATTATCCTGACCTAGAAGGGCATGAGCTATTGTGTAATCACCTAGCCCCCAAAATAAATCTGCGctccaagaaaaagaaaaagaaacaatcagCATCACCTGGGGAAACTGATTCCAATGAATCAGAGTCATCTCTCTCTACCATATCATCTTCCACAAAAGATAAAAGATCCAACCGGAATGGCTTGCAATATGACCTTACACAGCCAAATCGGAGGCATAAATCCCAAAGCCAGGAAGAGAAAATGTTCTTGGATCGGTTGCACCATTTCATGAATGATAGACAAACTCCCATTGGCAAAGTACCCATGCTAGGACTTAAAGAAAtggATCTCTACAAATTTTTCTCAAAAGTGCAACATATGGGAGGTTATGATAATGTATCAGCAAATAGAATGTGGCCTCGAGTGTTTGATGAAATGGGTGGCGATCCTGCAAATACCAGTGCAACCACTCATTCTAAACGACATTATGAAAGattACTTCTTCCCTATGAGAGAAAGCTGCGTTCCGATGCTCTAACAAGAGCCGGAATTAGTAGTCAAGATTATGAGGCCTGGGTAGAATCATTAACAAGTGCTGCTGATCTTAAGGATGGTGAAGAAttagaaagaagaagaaaaatgctGTTAGAGGGTACAACATCAGCTTTAAGAAGTATACGcttaaaaccagaaaaatcttCAGATCTCACTGGAAAGGAGAACATACCTATGTTAAGACTCTCAGAGCTTTCTGACCAATCGCGAACAGTTCATTCACCAGAGGTTATTGTGTTAGACTCCGAAACAGAAACTCCAATCAAGAATGTAACAACACCTATGGTTCCTGTTCTGAAAAAACGAAAATTGGACATGCTCAAAGAAGGTGGATTGGAGGTCACCCCTATTGGTTCTCCTGGATCATCTGGTTCTGGTCAGACTGATGGGAGAGCAAGTGTGAAACCAGCTCCAAGTCCAGAAACACCACCTGGGCAAGTTTCTGTCATGGTGACACCTGATATAAGTCACATGCTTGGCTCACCAAAAGCAGGATCTCCCGAGACCTGTGCTTCTCCTATGGATTCTGCACAGTCCTCTCCAGCTAATGCACGGACAGTGATAAATGTGCAAGACCTAAAAAGTTCACCTCTCTTAATGTACCCCGGCTTGACAACAAGTCAGAACGGAAGAAATGACCAACCACCTCCCAAAGTAACTCAATCTCGGTCAATTTATGCTAATTCTGCTCTCGGTGGACCATGGTATGGGAATCCCAAGGACTATCCAAGACCAGGAAGTAACTCAAACACTGCCAATGCTAATTCTGAACCGCCTATTGCAAGGTCCCTTCAGGCTGCCCTACGTGTTGCTAACAAATCAAATTCAGGTGGCAGCTCACCTGGCGGCAGTGTTAGTGGAAGTAGCAGTGGCAGTGGTAGTGGTACTGATGTTTTGGACTTGAGAATAAAAGGTGAAAAGCCTTCTGTTGAAATTGTGCGTGTTATGCCCAGTGTAAGTGCACCCCCACCCAGACAAGCTCCAATCAGAGATTCTGGCAGAGCCAATGTTCCCCCTCAAGTGCTTCCAACTTCCATTGGTCGTACCACTGTTGGATCTAACTTAGAAATCACACTAGTTCAAAATCCTAAACTTGCAATTGCCAAAATGCAACAGGAACAAAGAAATGTGTTATTACAACAAAGAAGAGTAGCCCAACAACAAGCTAAAGCTTCTGCTCCATCAAGTCGACCTTCACCTCGGATTGAAAATGGAAGACCTCACACTGCCTCAACATCCACATCAAATTCAAGTAGAAGTAGGCCACCTTCTGTAAACAACTCTCCTTCATCATCAGGCCTTGTAATCCCCTCCCCCTATGCATTAGGCAACAATAGTAATAGTAGCAGCACAAATAGTAGTAATAGTAGTAACAATAGTAAAAGGAGAAATTCAAACGATCAAAGATCAAGAGCAAGTGCTAGTACCCCTACCTCTTCTGCTGCTACAAATCCATACTTCTCTGGAGCAGCAGCTGCCTCCCTATTTCCAAATTTACTCCAAAATCTTCCTCCTGGttctgcagcagctgcagctgggaAAAATGCTTTCTTACCAGCACTTGATTTAATGTATTATCAAGCATTATGTAATCCCCAGCTTTATAACCCTGCTGCTGCATCTGGGCTACCAATGTCTGGTTTACCTATGTCCACTCCCCAGCTATACATGCCAACAGAAGAACAGTTCCAGCtttataaaaatattttaagtcaTCAACTTAAATCAAACCCAGCTCAGGCCAGTGAGGACATTGCTCGATTATTGCAGGATGGCTCGACTTCCATTACCCTTGTTGGTAATTCAAAAAACCCTACTTCCAAatga
- Protein Sequence
- MFQHEVLAISDRVVIRCEDLLTWLTDDASWSWGLPAVWDKDCSGVSNGVPTTTRLQALSDTCLDFSDIEEEKLKLDPSTWDNCGVVVLSFPRYCRYRALMKRLEGVPNKWLRNSLVTALGGFSVPCRDTRVLFCKDTFDYPDLEGHELLCNHLAPKINLRSKKKKKKQSASPGETDSNESESSLSTISSSTKDKRSNRNGLQYDLTQPNRRHKSQSQEEKMFLDRLHHFMNDRQTPIGKVPMLGLKEMDLYKFFSKVQHMGGYDNVSANRMWPRVFDEMGGDPANTSATTHSKRHYERLLLPYERKLRSDALTRAGISSQDYEAWVESLTSAADLKDGEELERRRKMLLEGTTSALRSIRLKPEKSSDLTGKENIPMLRLSELSDQSRTVHSPEVIVLDSETETPIKNVTTPMVPVLKKRKLDMLKEGGLEVTPIGSPGSSGSGQTDGRASVKPAPSPETPPGQVSVMVTPDISHMLGSPKAGSPETCASPMDSAQSSPANARTVINVQDLKSSPLLMYPGLTTSQNGRNDQPPPKVTQSRSIYANSALGGPWYGNPKDYPRPGSNSNTANANSEPPIARSLQAALRVANKSNSGGSSPGGSVSGSSSGSGSGTDVLDLRIKGEKPSVEIVRVMPSVSAPPPRQAPIRDSGRANVPPQVLPTSIGRTTVGSNLEITLVQNPKLAIAKMQQEQRNVLLQQRRVAQQQAKASAPSSRPSPRIENGRPHTASTSTSNSSRSRPPSVNNSPSSSGLVIPSPYALGNNSNSSSTNSSNSSNNSKRRNSNDQRSRASASTPTSSAATNPYFSGAAAASLFPNLLQNLPPGSAAAAAGKNAFLPALDLMYYQALCNPQLYNPAAASGLPMSGLPMSTPQLYMPTEEQFQLYKNILSHQLKSNPAQASEDIARLLQDGSTSITLVGNSKNPTSK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00732895;
- 90% Identity
- iTF_00732895;
- 80% Identity
- -