Focc002764.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- -
- Assembly
- None
- Location
- ML763236.1:335775-339108[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00014 0.78 9.8 0.2 13 45 170 202 162 206 0.89 2 4 2e-05 0.11 12.5 2.1 13 48 210 245 207 254 0.92 3 4 0.012 66 3.6 0.1 22 46 268 292 259 303 0.86 4 4 0.023 1.3e+02 2.8 0.1 8 25 343 360 341 407 0.84
Sequence Information
- Coding Sequence
- ATGAGTGACGGGGAGAAGGAACTCGGGTCTCGAATGACCCGAGTTTCTTCTGCGGAGAATCTGCGAGGTACTGTCCCAACAGAAGAGACCTTGTCCTCGCCTGTTGCTCCGACGAAGGGAGAATGTGTCGGTCTTTACAGTGATGTGCCATTACCGCATTCGCCGACGCGCGCTCCTTCTGGTTGGAGTctgtcgctgtcgctcagcAGGGCCAAGCGAGCCCTAGTTGACGAGGAACGGGAAGAAAGCAAGAAAAAGCCTCGGACGGAGCCTGAACAACAGGTGAAACCCAAACCTGCAAGGCGGGTGACGCTGGTAGATTTGCAGCAGCTTCCCAGCACCAAGAAGGTGCCACAGCATGTGAAGCCAGCGCGCACACGCCCGTCTTCAACAACATCCACACATTCATCATTGAATTCATCTGGCTCTGACTTGGAGGAGGGTGAAGTTCCTCCTAGTCCACCTAGAGGGTCTTTGCCTTCTAAAGTAGCTCTTTCATTTATCAATGATGATGAGGTTGAAGAGCTGAAACTTAAGAATGAGGCTCTGGAGCAACAAGTGGCTTTCCTCAGGAAagctaatcaatcattggcggCGCATGTATCGGATTCCAAAGATGTTTTGTACAAAGAAGAGGTAAAAAAACTTAACAAAAAGGTGACCAACTCTAAAAAACGCATTACGGCTTCTGAAAACGAGTGTGCTGAGCTGAAAGCAGCTCTTAAGTCTGAGaaaaagaaagcaGCTGACTTGGAACATAATGTTAAAAGTTTAGAAACCAAGCTAGAGAGGGCAAATGGAAAGATATCTGACCTGGAAAGTCAGAGAAAAACATTACGTGATGAAATTGCTGCCTTTAAAGTAAAGATTGCCAATCAGAGAGCAAATTTAACAGGCTTGGAAAATCAACTcattaaatttaaaagcaaCGAGAGtaagGTACCATCCTTTTTTAAGGTGCCTACTAAACCGGAAAATATTAATCCCAACAAATGCCATTGTGTGAATCATTGTCGATGTCGTGATCTGATGTTAGGGCTGGAGTGTGAAGTGTCAAATTTGAGGACTCGGATTAAAAATCAGACTTTTCATCTTGCTAATCTCACTGCTGCGTTTGACAAGACCAAGCTGGAAGCTTCTCGGGTTAAGACTTTGGAGTTGGAGTTAAAGAGGACTTTAGCTAGAGGGGATTCTGTAGAACAGAAGACCTCTAGCAAGTCTATTTCATGTCATGGTCTGAAGACAGAGGTCTCTGATAATCAAAGGGAAATCAAGAATGAGATTTGGAAACCACCTGTTATTGTCTTACAATCACCTGAAAGTAGCTCTGAAAATGACAGCTTGGGTACCCTCCTCTTTGAAAAGAAGGTGTTTAAAGTTATTTCGGATAATTTTATCATGGCCAAGAGTATAATGCAGAATTTTGACGAGACTGCATACACCCTGCCTGTACTTCGACCAGCCTATCGCGCCACCATTGCAG
- Protein Sequence
- MSDGEKELGSRMTRVSSAENLRGTVPTEETLSSPVAPTKGECVGLYSDVPLPHSPTRAPSGWSLSLSLSRAKRALVDEEREESKKKPRTEPEQQVKPKPARRVTLVDLQQLPSTKKVPQHVKPARTRPSSTTSTHSSLNSSGSDLEEGEVPPSPPRGSLPSKVALSFINDDEVEELKLKNEALEQQVAFLRKANQSLAAHVSDSKDVLYKEEVKKLNKKVTNSKKRITASENECAELKAALKSEKKKAADLEHNVKSLETKLERANGKISDLESQRKTLRDEIAAFKVKIANQRANLTGLENQLIKFKSNESKVPSFFKVPTKPENINPNKCHCVNHCRCRDLMLGLECEVSNLRTRIKNQTFHLANLTAAFDKTKLEASRVKTLELELKRTLARGDSVEQKTSSKSISCHGLKTEVSDNQREIKNEIWKPPVIVLQSPESSSENDSLGTLLFEKKVFKVISDNFIMAKSIMQNFDETAYTLPVLRPAYRATIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -