Fint004427.1
Basic Information
- Insect
- Frankliniella intonsa
- Gene Symbol
- -
- Assembly
- GCA_033675135.1
- Location
- CM066253.1:17089748-17091369[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-10 1.2e-06 27.2 11.0 3 41 15 51 13 57 0.90 2 2 0.00058 0.82 8.5 2.1 23 42 70 90 56 94 0.85
Sequence Information
- Coding Sequence
- ATGGCGTCCactgcagcgggggcgtgctgcccccccgcgccacgcaagTGCCTGCGCTGCTACGGCCACGGCATTCacgccgcgaggaggaggcacACCTGCCCGTTCAATGACTGTGCGTGCGTCCAGTGCGCGAGCGTGACCAGGCGCAACCTCTCACGCAACGAGCGCAACCGGGTCCACCGCGGCGTCAGGCAGCAGGGGGACCCGTGTCCTTACGCCGGCTGCCAGTGCGGtccgcgctgcagggcgctggAGGCCAAGCAGAAGTGGCTCTACGCCTTGGCACAGACCTCGGCGCAGGCCTCGGCGCAGGCCTCGGCGCAGGCCTCGGCGCAGGCGGTAGCGCAGACCTCGGCACAGGCCGTAGCGCAGGCCTCGGCGCAGAACCCGGCGCAGGCCTCGGCGCAGGCGGTAGCGCAGACCTCGGCACAGGCCGTTGCCCAGACCTCGGCGCCGGCTGCAGAGGTccccgagcagagcgcgccggTGGCACGGCGCGACGAGCCCGCCCTCCGCGAGGCGGCGGCTCTCCAGAGCCCTCCACGGCCCTCCGTAGTTGTCGTCAACACCGAAGCAGCCTCACTTCGATATCGACCCTCCGTGGAGGTGGACGAGGAGCCTGCGGCGCGTCCGCCTTCGGTGGAGGTGCTCGcagtgcccaccccgcccccaccggcaGTGGTGGACCTCGAGGAGCCAAACTGGACCAGAGTCCAGGGGACCACGTGGATATGGTGCACATGA
- Protein Sequence
- MASTAAGACCPPAPRKCLRCYGHGIHAARRRHTCPFNDCACVQCASVTRRNLSRNERNRVHRGVRQQGDPCPYAGCQCGPRCRALEAKQKWLYALAQTSAQASAQASAQASAQAVAQTSAQAVAQASAQNPAQASAQAVAQTSAQAVAQTSAPAAEVPEQSAPVARRDEPALREAAALQSPPRPSVVVVNTEAASLRYRPSVEVDEEPAARPPSVEVLAVPTPPPPAVVDLEEPNWTRVQGTTWIWCT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -