Fint004967.1
Basic Information
- Insect
- Frankliniella intonsa
- Gene Symbol
- -
- Assembly
- GCA_033675135.1
- Location
- CM066254.1:11083027-11089299[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 5.1e-08 7.2e-05 21.5 10.0 1 40 29 69 28 72 0.88 2 5 3.5e-12 4.9e-09 34.9 8.6 1 42 78 120 78 125 0.90 3 5 0.85 1.2e+03 -1.6 0.2 31 37 356 362 353 366 0.72 4 5 6 8.5e+03 -4.7 0.8 28 32 564 568 559 569 0.60 5 5 6 8.5e+03 -4.4 0.4 30 35 607 612 607 614 0.60
Sequence Information
- Coding Sequence
- ATGCAGAACGACAACGACGCCGTGGAGGAGTTTGACCTGCAAGAGAGGATAGTGAAGGGAGCCTGGAAGaagagcggcggccggcggccgcagccctgcAGGATGTGCATGAACCACGGCTTGCTACGGATGTTCGTGGGCGGCCACCGCGCGCACTGCGCCTACCTCTGTTGTGCCTGTGAGATGTGCATGGCCAGCCGGCGCCGGATGGGCTCTGGAGACGTCAGCGGCAAGCCTCCCATGTGCACCATGTGCCAGAACCACGGCGAAGAGGTCCTCTTCACGGCGGACCACAAGTTCCGCTGCAAGTTCTTCAAGTGTATGTGTCGCAAATGCCGCGGCGTGCGCACCCGCTTCAAGGCTGCCATGCAGAACAAGTCTCTCTGTCCATctccgcgccagggccagggccagggccagggcggcctggTGGCCGCCTATGGCAGTGACGGCGACTCCATGAGCGGCCTCGAGGACCCACGCTGGTCAAAAGATCGTGACGGCCTGGGCGCTCACGCCCACGAACAAGAGCCCCCTCCACCAGGTGTGGACGATGAGACCCCGTCCGTGGTGATGCTCCCAGCTGAGCCGGTGCTGCCCGAGCTTGTCGACCTGGAGGACGAGTTGGGAAGCGGCGAGGTGACGCCGGctcctgcgccgcggggcaggatgACAGCCCCGCTCAAgctcaccgcgcccgcgcccgcgccgctgtcgcccAAGCAGCTCAtgcccccgcccagctcccgcGGGGCCATCAAAGCAAAGGATTTAACCGGGCCGATCACACAGCTGGCAAGGATGGTGGCCTCCTGGGGCAGCAGttcagcgccgcccgccatccCCGCGGTCCCCGTGGGCTCTGTGACGCCCGGCACGGTCCTGGCGCCCACGGCGACCGCcgtggtgccggcgcggccgtgggagTCGTCCTCAGGAAGGCTGCCGAACGTCGCCTGGTTCAAGAAGCCGGACCCCTGCGAAGAGTGCGGCGTCCTGCAGACTTCGGCcctcggccgggcggcacaCCGCGTCGAACTTCACACGGCTCCCACCCGGCGAGCGTGCAACAAGTGCAGCGCCGTGTCCTGGTCGCAGCTGCAGGGTGACGTTCACGAGGCTTTGGCGCACCCGCCAGATGTGCCGTACCGCTGCGCCGTCTGCGCCGCGAGCTTCCCCTCGGACGTGATGCTCAACACACACCTGCTGACGACCAAAGACGCCCAGCACGTCGCCTACAAGAAGAGTCTCCCCGCGGAGCAGGCCAGCCTTACCTGCCCCATCTGCTGGTCGTACCGGACAAAGGACGCCAAAATGCTTGCCTCGCACGTCCGAGCGGAGCACGCTGACTCCACCCCCTTCGCGTGCGACGAGCCAAAGTGCGGCCTGGCCTTCGACGGgcccctggcgctgcagcaTCACAGGCGGCGACACGTCCAGCAGAACGCCCAGGagcgctgcctggcctgctgcgtGCCCTTCGTGACCCGCGAGCTGCTCAACGACCACTGGCGCCAGAGGCACCCGGGGCCCAAGCCCTTCGCCTGCCCGCTGTGCGACAAGGCCTTCACGGCGCCCCTCGGGCTCACCCAGCACGTTCAGAGAGAGCACCCTGGCGCCTCGCCGTTCAAGTGCCGCGAGGCAGGCTGCAACCGCAGCTTCCcctgcgtggcgctgctgcacgaGCACGCGTGCGAGTGCAGGCACATGTccctgcccgcgcccagccaTCTGTTCACTCCGCCCAAGCTGTggcagccgcagctgcagctggaccccacccccacctgcagccccGACACGGCTACCACGGCCAGCACCTGCTCTGCGTGCTCTGTGACCCTGCCTGACGAGTGGGCCCTCATTGATCACCAGGACGCGGAGCACATGAACTTGTACTGA
- Protein Sequence
- MQNDNDAVEEFDLQERIVKGAWKKSGGRRPQPCRMCMNHGLLRMFVGGHRAHCAYLCCACEMCMASRRRMGSGDVSGKPPMCTMCQNHGEEVLFTADHKFRCKFFKCMCRKCRGVRTRFKAAMQNKSLCPSPRQGQGQGQGGLVAAYGSDGDSMSGLEDPRWSKDRDGLGAHAHEQEPPPPGVDDETPSVVMLPAEPVLPELVDLEDELGSGEVTPAPAPRGRMTAPLKLTAPAPAPLSPKQLMPPPSSRGAIKAKDLTGPITQLARMVASWGSSSAPPAIPAVPVGSVTPGTVLAPTATAVVPARPWESSSGRLPNVAWFKKPDPCEECGVLQTSALGRAAHRVELHTAPTRRACNKCSAVSWSQLQGDVHEALAHPPDVPYRCAVCAASFPSDVMLNTHLLTTKDAQHVAYKKSLPAEQASLTCPICWSYRTKDAKMLASHVRAEHADSTPFACDEPKCGLAFDGPLALQHHRRRHVQQNAQERCLACCVPFVTRELLNDHWRQRHPGPKPFACPLCDKAFTAPLGLTQHVQREHPGASPFKCREAGCNRSFPCVALLHEHACECRHMSLPAPSHLFTPPKLWQPQLQLDPTPTCSPDTATTASTCSACSVTLPDEWALIDHQDAEHMNLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -