Ffus007436.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Frankliniella fusca
Gene Symbol
zfy1
Assembly
GCA_029379305.1
Location
JAHWGI010000351.1:201213-204886[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.59 51 5.4 0.7 1 23 178 201 178 201 0.96
2 15 2 1.7e+02 3.7 0.8 2 23 301 323 300 323 0.88
3 15 0.33 28 6.2 0.8 2 21 338 357 337 358 0.93
4 15 0.042 3.6 9.0 0.3 2 23 373 394 372 394 0.96
5 15 0.0016 0.14 13.5 4.3 2 23 399 420 398 420 0.96
6 15 7.5e-05 0.0064 17.7 3.5 1 23 427 449 427 449 0.99
7 15 0.00012 0.0099 17.1 0.3 1 23 455 477 455 477 0.96
8 15 3.3e-06 0.00028 21.9 0.1 1 20 483 502 483 504 0.94
9 15 0.00095 0.081 14.2 0.4 1 23 555 578 555 578 0.95
10 15 4.5e-06 0.00039 21.5 0.4 1 23 597 619 597 619 0.97
11 15 0.0071 0.61 11.4 1.6 1 23 625 647 625 647 0.98
12 15 8.9e-05 0.0076 17.4 1.3 1 23 653 675 653 675 0.98
13 15 0.00029 0.025 15.8 0.1 1 23 681 703 681 703 0.98
14 15 9.5e-06 0.00082 20.5 1.2 1 23 709 731 709 731 0.98
15 15 0.0011 0.092 14.0 4.9 1 23 737 759 737 759 0.98

Sequence Information

Coding Sequence
ATGGAGTCCAACTCTTCCTATGCTTTAACACTGAATGTGGATAGTGAGAGGGTAGAGTATGAATTTAATGAAGAGCAGCGCCTTGAAGGAATGTGCAGAGTGTGTGCTTCGTCAGACTCAATGCTGATACCTGTTTTTGACTCTGCTGGTGAAAGTAAAGGCATTGTTGATCTTCTTAATAATCATTTACCTATTCTGGTTACACCTACTGATCTCCTCCCCGTCACAGTTTGCACAGTGTGCCTTGATACTCTGTCTTCAATTCACTCTTTAGTTGAAGTCTGTGTTCAAGCCAATGAaaaaatgcaacaaatgctgccATTAAACATTGTAGGAGTTACCCAGCTAAATAATTATGAGATGTCAGAAGTAGAATTCAGTGAGCCATCTCTTCAATTTGACTCAGCACCTGATAGAGACGCAGATCATTGCACTAGACAGTACAATAGTAGTAACTTGGTTGAAAGTGAGACAACATTTGCAGTACCTGAACAGCCACCGAACAGCTTGTTAAATAAAGAACGTAAATTGTATCGATGTCTCCATTGTGAAGTTACTGACAGTGATGCTTATTCACTTTTGCTTCATCAGATAAAGTCACATCCagAAAAACTATTGAAATGTAGCAATTGTGATTTTGTCTGTAGTGCTGATCAAACAAGCAAGTATCATGAGCATTTAAAATTTCATTCTGAGTCAATAGATTCATTCAGTCAATTAGAAATACAGAGCCAAAATGAAGAGCTTCCTCTTAAGAAAGAACATAATGCAAACAATGGACGCATTAAAAATAAAGATGGCAATCAACAGCAAGATAATATATCCAGTCGGAAAAGAACATGTACTGATAAAAAGAGTTCTAACAGTGCTAAACAAATGGCTAAAAAAGAGGCACATTGGCGTTGTGGATTCTGCGGCATGAAGGCAAAGTCCAAAGTTGGTTTAATTGATCATTGCAATATGAGACACAAAGAAAGGCTTGGCTTATCATTTCTTAATTCTGGCTCCTTAGAGTGCGCAAGGTGTAGAGAAACATTTGAAAGTGAAGTATGGCTAAAAGATCACTTGTGTCACTCAGTTTTTCTCCCTAAGACTATTCCTACCCCTAAACAATTATCATGTCTAACATGTCCTCAAGTATTTACAGAAGTCAAGTTGTTTAGGGAGCACCTCCTGTCCCACACAAATTCTGTTAAATGCCATGTGTGTGGTGCTCATTTTAGGTCTCAATCACATTTGCAACCTCATCTTGATAAACACAAAAATAAACAGACCTCTTTCCAATGTCCACATTGCCCAAGAAACTTTAAACTAAGATCTCGGATGAAAATACATTTAAGGACACATACTGGAGAGCGGCCGTACATGTGCGTAAAATGTGGGAAACAATTTTCAACTGATAGTGGATTTAGATTGCATATGGCAGCTCATGAGGGCATAAAGCCATATGTGTGTGCACAGTGTGGACAGACTTTTAATAGACCATCAAACCTGAGACGCCATGAAAGTGTTTGTGGGGATACAAAATTACAGTGCAGAATCTGCAAAGACAAATTTTCATCAAGAGAAGAAATGCATTGTCACAGAGCAATGCATAGTAAAGAGGAAAAAGATGCAGAACAAGCTCTCTTTGATGATGGAACTACTTCTAAGATTGATAGATTCTCTTGCAAGGTTTGTGGCATGAAATTTGATCGTGTGGTAGAATTATCACAACACAGGCAGGAGTCTCACACTGCAATAGAAGTTGAAGAAGCAAAGAAAGCTGGCCAAATAGATGGTGGAGCTTTTGTTTGCCCTGACTGTGGAAAAGAGCTGTACAGTAAGAGAAATTTTGAACGACACATGCTCTTACATAGTGGCAATACCCAGTACCACTGTAAAGAGTGTGCGAATGTCTATGCAACAAAATTTGCCTTGGAGTACCATATGTACACCCATACTGGGGAACGTCCATTCAAATGTGATATTTGTCCTGCCGGCTTCAAGACCAGAATAAGTTTAAAAATTCATCACATGAAGCACACAGGCGAGAAGCCATACAAATGCCGCATTTGTTCCATGGGATTTATCACAGCTGCCAGTCTTCGTCTTCACCTGGTTACTCATTCAGATACTAGGATGTTTTCTTGTAGTTACTGCCCTGCAACATTTAAACGGAAAAAGACTTTGGTGACTCATGTTCGCATtcacacaggagagaaaccGTATGAATGTAAATACTGTGGTAGACGTTTTACTCAGAAGGGGTCATGCTCTCAGCATGAAAAGACTCACTCAGAACCTAAAAGTCTAAGACTATCTGATGGTGTTCCAAATGGCATGGAAGTAACAGTTGTCAAAAATTGGAGGGGTCAAGTTAGTCAAACTTTCCCTGAAGAAGATGCAAACAGAATAAACATTCTAGTTTCTCAAGATGACAACAATGCATTACAATGTGAGGCGGTTCAAGATATGGTGTTAATTCAACAAGATGTTGACTGTGTCATTGAATCAGACTTAATGGACATCAGTGAAGATATGCTCCGCAGCAATAAGCATGCTATAATTATTGAGCAGGATGGTATACTAGGCGATGTCCCTGTGACAGGCTTGAAAGATGCTAATTCTGATCCTCAAATGCCAGTTTTAGACGAATGA
Protein Sequence
MESNSSYALTLNVDSERVEYEFNEEQRLEGMCRVCASSDSMLIPVFDSAGESKGIVDLLNNHLPILVTPTDLLPVTVCTVCLDTLSSIHSLVEVCVQANEKMQQMLPLNIVGVTQLNNYEMSEVEFSEPSLQFDSAPDRDADHCTRQYNSSNLVESETTFAVPEQPPNSLLNKERKLYRCLHCEVTDSDAYSLLLHQIKSHPEKLLKCSNCDFVCSADQTSKYHEHLKFHSESIDSFSQLEIQSQNEELPLKKEHNANNGRIKNKDGNQQQDNISSRKRTCTDKKSSNSAKQMAKKEAHWRCGFCGMKAKSKVGLIDHCNMRHKERLGLSFLNSGSLECARCRETFESEVWLKDHLCHSVFLPKTIPTPKQLSCLTCPQVFTEVKLFREHLLSHTNSVKCHVCGAHFRSQSHLQPHLDKHKNKQTSFQCPHCPRNFKLRSRMKIHLRTHTGERPYMCVKCGKQFSTDSGFRLHMAAHEGIKPYVCAQCGQTFNRPSNLRRHESVCGDTKLQCRICKDKFSSREEMHCHRAMHSKEEKDAEQALFDDGTTSKIDRFSCKVCGMKFDRVVELSQHRQESHTAIEVEEAKKAGQIDGGAFVCPDCGKELYSKRNFERHMLLHSGNTQYHCKECANVYATKFALEYHMYTHTGERPFKCDICPAGFKTRISLKIHHMKHTGEKPYKCRICSMGFITAASLRLHLVTHSDTRMFSCSYCPATFKRKKTLVTHVRIHTGEKPYECKYCGRRFTQKGSCSQHEKTHSEPKSLRLSDGVPNGMEVTVVKNWRGQVSQTFPEEDANRINILVSQDDNNALQCEAVQDMVLIQQDVDCVIESDLMDISEDMLRSNKHAIIIEQDGILGDVPVTGLKDANSDPQMPVLDE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00733396;
90% Identity
-
80% Identity
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