Ffus017480.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- -
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010001142.1:3203859-3210952[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6 1.8e+04 -3.5 0.2 4 9 132 137 131 140 0.71 2 3 0.001 3.1 8.5 7.0 3 35 250 284 249 286 0.89 3 3 3.4e-11 1.1e-07 32.4 7.3 4 36 401 433 398 439 0.92
Sequence Information
- Coding Sequence
- ATGAGCGACTGCGGATCCTGTGGATCCTGTGGATCCTGCGACGACTGCGGCTGCGGAGGCGCCGGTGGGGACGTCCGCGACAACGACAACGGCTGCTGCCCCTTCTGGCTGGACGCGTGCGTGCCcgtgTGTGTGAACATGGACCTGGCTCCCGAGCAGCTTGGGCTGTCGGCGGGACCGCTGCCCGAGAAGACAAACTGGGACCTCGTCCAGAAAAACCCAGTGCTGCAGGAGGAGGCCCCCATCCTGAAGGAAGATAGCGACTGCGCGAGGGAAGACCCTGCCGTTAGTGTCGGACCCAAGGTAGGCAGCGCCCTGGAGGATGGTGTTGGCGATGACCGCGAGGACCAGCCTCAGCTTCGCGCGTCGACCTTGGTGTCTCTGGCCGCCCAGGACTGCAAGCGGTGCGCGGGCGTGGGCTACACCTACCTCGCCTCCTCTGCCCCGGGCGTAGCAGTGTGCAAGTGCTGCCAGGGCCTCGACGGCCTTTACCGGGTCGGCCTTCTCGGCCTCGCCTTCTCGCGGAAGGCTCAGGGAAGGGGGTCCGTGCAGATACTCGCCTCCAGGAAGAGCTCCAGGGCGGAAGCACTGCCCGCCGCAAAGGCCTTCGCGAAACGACCCGCGTCCAGCTACACCTACTTCTACCTGGATACGGTCAAGGAGGGCGGCGTCAAGGCGGAGGAGGCCCTGCGCGTCGCGCTGGGGGAgatggccgccgccgtccgcgacCGATGGGAGAACATCGGCCCGTGGTGCTCGCACTGTGTCGGCCACGGCGTCGCGCGCCGCCAGGGCGCCGACCACCCGGCCGCTCTCTGCCCTCTGCGcgcctgctggtgctggcaGTGCCAGAGCGACTCGCCCTACTTCAGCATTCTGGCCAACAACGGCGTGCTCAAGTTTCCCTGCGTAGCTTTAGAGAGGCTAGCGTCGCCAGTGTCCGGCTTGAAGAAGTCTACCGTGAAGGACACAATGGACATCATGATTGAGGAGGCGATCGACGCTCCGCAGGCTGAGCCGTCACCGCCGCTGGTCTGGGTAAGGCGCGACCTGCACGCGGACGACGCAAAGCAAAGAGAGGCCAATGATGTCCAGTCGTCCAAGCGGAGACAACGTCACCACGCCACCGCGCTCCTCTCCTCGGACTACATCGAGGACCTCCTCAACCAGAGGAAGGAGACCCTTCCCAAGGACTCGCGCGcgtgccgcgcctgccgcctcCACGGCATCGTTACGGGTCGCCGCGGGCACACCAACCACTGCCCCTTCGcgagctgcagctgcgcccGGTGCGCGGCGGACAGGGAGTCCGATACCGCGTCACCCGCGGCTCCCGAGAGGTCCTCGGAGTCCGGACCGCCGCCACAGCCGCCCGAGAACCCCTTCCTGATGCCGGTCTGGAAAATGTCCCCGAAGTCACCTCACCCTGTCGCATCACTTCCGCCGCCTGCGTCGGCCGAGTCATCCGGAGTCAGGCACCACGCTGCACCACCTCGCCCCTCGTCACCCTGGCCGTCGCCTCTGGGTGACGACGGGGACCCCTTCCCGGAAGAGCCACCACacctgccgctgcagctgccgccgcgggcgccaccaccaggccccacgcccccgcccccgctcttgACACCCGCGGAGGCCCGGCCGTGCACTCCACCTCTTCCTGCCATTGGGGGCCACAAGGTTATAGTCTTCTCCCCGCAGCGCAGCTCCTCCAACTGCAACGCCCACGAGGACGAAATAGATTTCGCCTACGCTTGCCTGTGGTGCGGACTGTCCTTCCAGGACGAAACGGCGGCCGACACCCACGCCCTGACGCACGCCGAGGATGACCCCGACCCGGAGCAGGAGGCCAGGTGTGCAGGCGCGGCCAGGACGCGGGCCCTGGTGGCCGGTCGGACTAAAGTAATTGGCCCGCGGGCATTCCCGGAAAGAGTTCTTAGTTGTTTCATCCCCGATGCGCAGAGAGGGCCGCCTGTGATAAAGCAGGAGCAGGGGACGCAGGCAGCGTCCGCGGCCGTGGTTCGACCGGCGTCGCAGACTAGTTGTAGAACGACAGGTCAAGCAGAGACTACGACGCCCGACCTGACGCCCGACCTGACGCCGGCCCTGACGCCGGCCCTGACGCCGGCCCTGACGCCGGCCCTGACGCCGGCCCTGACGCCGGCCCTGACGCCGGCCCTGACGCCGGCCCCGATGCCGTCCCTGACGCCGGCCCCGAAGCCGTCCCTGACGCCGGCCCTGACACCAGCCCTGACTCCTGCCGCAACGCCTGCCGCGACGCCTGTCCTCGCGGTGCCCCCGAGGCCTGCTCTGACGCCTGCCGCGACGTCTGTCCTCACGGTGCCCCCGAGGCCTGCTCTGACGCCTGCCGCGACGTCTGTCCTCACGGTGCCCCCGAGGCCTGCTCTGACGCCTGCCGCGACGTCTGTCCTCACGGTGCCCCCGACGACTGCCACGACGCCCGCCGCGACGCCTCCCGCTACACTTGCCCCGACGCCTGACCTCACGGCGCCCCCGAGGCCTGCCGTGGCGCCCTCCCGGAGTGATTCCGTGATCATGAAGGCGCCCCCTGCCGTGGACCTGCACTGCAGCACGTGCGCGCTCAGCTTCAGCTCGCGCGCGGAGCAGGCCCGCCACCGCGTCGCGACGCACGCGCTCCCCACCTGGCACAGCTGCCACGTGTGCGGCAGCAGGTACCTGTCACGCGCCCGCCAGCGCAtgcacctgctgctcgcgcACCCCGTGCTCCGGGTCCCCTGCATGTACTGCGACCTGCGCCTCCCCACGGCCCTGATGCTCGGCACGCACCTCTTGGTGGAGCACGAGGCCGAGCTGAGCAATCTGCCGCACCCCTTCGCCCTGCAGTGCCCCGTGTGCCACGCGATCTGCCTGACGCCGGAGGCGCTCACGGAGCACGTCCACGCCAAACACCCGGGCTCGAGGCCGCTCCCCTGCGCCTTGTGCCCGCGCACCTTCGACAACCCgtccatgctgctgctgcaccaccaCGTCCacctggccgcgctgcgccgccagcaCTGCGGCGTCTGCGGCGTCTGGTTCCCCGCGCTCGAGCTGACGCTGGCGCACGAGCGCGAGGAGCACCCCGGCGGCCTCACCTGCCCCTTCCAGTCGTCCAAGTCGTCCTGCCCGAAGATGTTCAGCGACGTGGCGGACCTGGACAATCACCTGCTCGGCGCGCACCAACGCTCGCGACGACGCTCGTACTCGTGCCCGTGCGGCCTGAGCTTCAAGCTCCTGCGGGAGCACCTGCAGCACGCCAGCGCCACGCTGCAccaggccgtgccgggcccggcccgtagGCTGCACAGCTGTCGGGGGTGCTTTCTGAGGTCTGAGGATTCGCTGCGTGTTGGTGATCACGAGGACATTTACCATagtgggctgctgccgctggaccgAGTGGCGCAGCTGTTAACTCTCATCAATGACGCTCAGATCGTCCAGGGGTCAGGCAGTCTGCAACTCTGA
- Protein Sequence
- MSDCGSCGSCGSCDDCGCGGAGGDVRDNDNGCCPFWLDACVPVCVNMDLAPEQLGLSAGPLPEKTNWDLVQKNPVLQEEAPILKEDSDCAREDPAVSVGPKVGSALEDGVGDDREDQPQLRASTLVSLAAQDCKRCAGVGYTYLASSAPGVAVCKCCQGLDGLYRVGLLGLAFSRKAQGRGSVQILASRKSSRAEALPAAKAFAKRPASSYTYFYLDTVKEGGVKAEEALRVALGEMAAAVRDRWENIGPWCSHCVGHGVARRQGADHPAALCPLRACWCWQCQSDSPYFSILANNGVLKFPCVALERLASPVSGLKKSTVKDTMDIMIEEAIDAPQAEPSPPLVWVRRDLHADDAKQREANDVQSSKRRQRHHATALLSSDYIEDLLNQRKETLPKDSRACRACRLHGIVTGRRGHTNHCPFASCSCARCAADRESDTASPAAPERSSESGPPPQPPENPFLMPVWKMSPKSPHPVASLPPPASAESSGVRHHAAPPRPSSPWPSPLGDDGDPFPEEPPHLPLQLPPRAPPPGPTPPPPLLTPAEARPCTPPLPAIGGHKVIVFSPQRSSSNCNAHEDEIDFAYACLWCGLSFQDETAADTHALTHAEDDPDPEQEARCAGAARTRALVAGRTKVIGPRAFPERVLSCFIPDAQRGPPVIKQEQGTQAASAAVVRPASQTSCRTTGQAETTTPDLTPDLTPALTPALTPALTPALTPALTPALTPALTPAPMPSLTPAPKPSLTPALTPALTPAATPAATPVLAVPPRPALTPAATSVLTVPPRPALTPAATSVLTVPPRPALTPAATSVLTVPPTTATTPAATPPATLAPTPDLTAPPRPAVAPSRSDSVIMKAPPAVDLHCSTCALSFSSRAEQARHRVATHALPTWHSCHVCGSRYLSRARQRMHLLLAHPVLRVPCMYCDLRLPTALMLGTHLLVEHEAELSNLPHPFALQCPVCHAICLTPEALTEHVHAKHPGSRPLPCALCPRTFDNPSMLLLHHHVHLAALRRQHCGVCGVWFPALELTLAHEREEHPGGLTCPFQSSKSSCPKMFSDVADLDNHLLGAHQRSRRRSYSCPCGLSFKLLREHLQHASATLHQAVPGPARRLHSCRGCFLRSEDSLRVGDHEDIYHSGLLPLDRVAQLLTLINDAQIVQGSGSLQL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -