Ffus005942.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- -
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010000295.1:1728715-1732695[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.4e-05 0.043 14.5 7.8 4 35 7 40 5 48 0.84 2 6 1e-07 0.00031 21.3 8.5 5 35 58 89 55 91 0.88 3 6 0.00076 2.4 8.9 8.9 5 40 92 129 89 133 0.87 4 6 0.00029 0.92 10.2 6.7 5 43 186 226 183 230 0.84 5 6 1.8e-05 0.058 14.1 7.9 2 43 277 318 276 323 0.85 6 6 2.2e-09 6.8e-06 26.6 8.2 1 39 395 434 395 440 0.92
Sequence Information
- Coding Sequence
- ATGCCAGCACCCCAGAATTACTGCACTTGGTGCCGGAGACACGGCGAATGGAGCATCTTCAATGGAGGCCATCTCAGAATCTGCCGCTTCTACCGATGTAAATCCTGCAATATTTGTGATGGCAATGCGCAGTCGTCCAAAGCGGCGCTACCCAAGGATGTCAGTGGGTTCTGTAGAAGGTGTGGGAATCACGGAATGCAGGTGCTTGACAAGCCTTGGCACGCAACGAATTGCAGATACGGCGCGTGCCCATGCACCCGCTGCATGGGATTCTGCGTCTTCTGCATGTTCCATGATATCGAGAAGTACGACCACAGGCAGCACTCTCAAGCCTGCAAGTTCCGTGGCTCGTGTCTGTGCTCCCGTTGCGCCGGAGAGCGTCGACGGATGGGTGTGGACTTGAAAGAATCCCCCACTAAGGCTGCTCAGGAAGCAGAGAACAAGAAAGAGAAAACAGTGACGGATGAGACGCGTGTAATTGAGCCAGGGAGGACATCAGCCACCACGATCAAGAATGTGCCGCCCAGTCAGTCGAGTGCGTGTTTTCGAGAACTCTGCGTCTTCTGCAAGTTGCACGGCCAAGAAAAGGAAGATAATGGGCAGCACGCACAGTTCTGCAAGTTGCGGAATCAATGTCCGTGTGGCCTGTGCCTCGGAGAGCGTCGGCGGCAGGGGCTCGTTGTAAAAGACTCGTCAGCTGAGGTGGAAAATCTTATTGCGACAGACCAGCCACGCCAGATCGAGCAGGGAAAAACACAAGCTGAGGAGATCAAGAACGTGAGGAATGTTTCGTCTAGTCAGCCGAGTGGCTGCCGCAGTAGTGGATCTCGACCACTCTGCGTATTCTGCAAGTTTCATGACCAGGAAAAGTTCGATGTTGGAATGCATGCGAAGTTCTGCAAGTTTCGAGGCGAGTGCGCATGCAGCTGTTGCGTTGAAGAGCGCCAGCGGCTGGGTCTGGACGCGAAAGACTCATCCGCGAAGGCCGAGAAACCTGCAGAAGAAAAACCAGAGGAACCTACGGTTGACCAGCCACGATGCAGTCAACAGAAGGCACAAGCTTCGCTCCACACTACCAAAACCGACACTAGTAAAACTAAGAACCAACCTGCTCTTCAAACGGCAGACAAGCGCAAGGGCGATAGAATTGTGTTGCCGGAGCCAAAACGAGCTCACATCGAACGGAAACCTTACTGCCTGTATTGCCTTAATCACGGTTGGCAATTTCCAATGAAAAGTCACCATGTACTTGTCTGTATGTACAGAAACTGTCGATGTTTTGCTTGTCGTACAGTGCGTTCTGAACTTAAGGCCCTCAAGACTTGTAATTACACGTTTTCTCCACCTAAGAAATCCGTTGCTGTTGCTCCCCCTAATCCAAGGACTGTCCCAAACCAATCTTTaatgaattcagaaaaatcagccAATGAACCAACTCTTGGGGAAAAAGCTTCCTCAGTCAAACCAGCCTTGAAGGACTCAGCGTTCAAGTCCGACACGAATACGGCCGAGGAACCTGCTCCAACTGTGAAGCTTGATAAATCTGCTCCAACTTGCGAGGCAAGAAACGTATCAGTGTCTCTTCATACAGCCGAACAATCTACATCCGATAAGATAGACAATCACATAGTGCCCAAAGCAAAGAAAATGTTAAAAGACTCCTCGCTTCAAGAAAACCTGAATGGAGAGGGTTTACCCGAAGAGGAAGCCGCGGAGACAACCATGAGAGAGAAGGCCGCTGTTTGCGAAGTTGTCGTCGTCAACGGAGAAGACTTTGCCGTTGTGGACGAGGTCGGCGCAGACACATCATCTGATGAGATCTCAAGCAGCCAAGAGACCCTGCCAGACCTAAGCACCTCAAATTCTAACACTATTTTGTCCCATGATTTAGCAAAGCAGACGCCTTTCAAGGACGAAGAAGTAAATGAATGTCCTGCGGGTAGCTCACTAGAACATGCATTGAACAGCGTGGCTGGGTTAAAGGAAATTTCTGATATCAACCCGAATCTGAATGGAACGTCGGCTTTCTGTACGAAACCCCAAGGTGACACTACTAGTACAGATCGGGTGGTAAGGGAATCGGGAGAATCTCGAGGAGATTTATCGGATATACCTGGTACGCGTATGACAGGTTCCCTACGGAATGCAGAGGTTGTGGACTGCACTATGAAACATTCTACAAACCTCGGAAGCACCCAAAAAACGGACATTGCTGGTGACGGGCACCATGGAACGATTGAGAAAGGCAATGAAGACGCCTTATTAATAATCTCTAAAGCTAAGCAATCAGATAACAGCATAGGAGAAGacttggaaaaaagaaaatccgCAAGTGGTCCACTGTTTACGAAAATTAGCGATGAACGAGAAGTTCCTTCCGCTTCCTCTCTTCTTTCCCTCGCCATAAATGAAGTTGTTGGGACATTCTACAAATCGCCTGCAGAAGAAGATGGGAGGGCGTCGAATGAAGACAATGCCCAGGGAGTCAAAGACAATGGAAAAGAAATTCAGGCCCGTGCAGCTTCCATTGTTGACGATGTAGGGAATGTGCTGGGCTCTGCAATCGGCGTTAGTGAAATTGATGGTACATCATTGTCTACTAAACCGTCTACAGTAGATGGGAAGACGCCGAATGAAAGCACCGCCAAGATGGAGGGAGAGGAATGTGGGACTGAAAAAGAAACTCGGGGCAGCACATCATCACCTACGGTTGTCGAAGTTAGTAGTGAAGTGTCCCCTGCTGCAAGCGATGTCCTGAACGAAGTTGATGGCACGTTATCTACCAAACCGCCAACAGAAGATAGGAAGATGTCAAATGAAGATCTTGCCCATGAAGTGGAAGAAAAATTTGAGACTGAAAGAGGAATCCAGGCGAGCTGCCCCTCTCCCATTGTTGACGAAGCAAGCAATGTAGCGTCTTCTATTACAACGGACGTCTTAAGTGAAGTTGATGGAACATTCTATACTAACCCGTCCACAGTTGATGGAAATCCACCGATAGAAGGCATTTCCCAGGGAGATGTAGAGAAATGTGGAACTGAAAAAGAAATCCAGGGCAGAACATTAACTCCCACCGTTGTCGAAGTAAGAAATGAAGTGCCTCCTCCTGCTTCGAAGACTGGTTACGAGAAGACTCAGAGTGAAGCTTCTGCACAAAGAGGCGCCGAGGAATGTGATCCTGTTAAGGAAATCCAGGCCTTAACAGCTCCCCCCAGTCGCGAGCTGAGTAATGTAGCGCCCCCTGCTTCAGCTGACTGTTTCGATAAAGCTTCTTCCAAGCTATGTGCTGAAGACAGTGCGAAGACATCAACCAATCCAACCTCAGAGCACCATGGAAAGGGGACACCCGAATGCTCAACGGAAAATGTCAGTGAGATTGAGAGCCAAACACCTGGAGACAAGCCAAGTGCAGAACAGTGTGAAATAGCGAGCTTGCTGAACGAGCTAGCAGAGTTCGGCAAAAATCTTCGGCCGTACGAACGATACGCACGTTCAGCTAACTTGGGAAACTTGTTTACAAATTTACCCGAGAAACCGAAAGCGCCAGAGAAGAGTACATCTGTGCTGCCTAATGTATCACCAGGAAAGAAAGAAACTCCAAATCCTCTGCCTGTCTCAGGAAACAGTTCAAGTGACAAGTGTGCAGAAAACAGTCCCCGTACGAACAAAATGGAAGAACAAATAGAATCATCCAACAAAAAGAAGCAAAGCACAAATGCTTGCACAACATGCAACAAGGAATTCCCAAGTTCACAACAGCTGCGGCTGCACACTTACTTCCAGCACCAACTCGACCTTGAATCAAAGGACCCAAAAATTAAATGTCGTGAATGTTCGTTTGAATCTTCAAACCAGTTGGTTCTCTGTGATCATGAAAGTACCCACATGGGCCTAGTACCCCTTCAAAGACTGTTTTGCCTCTTTGGTCAAGTTAGACAGGTTTTAAGATTTCCAAAAGACGGTAGTGCAGAAACAAAGTAG
- Protein Sequence
- MPAPQNYCTWCRRHGEWSIFNGGHLRICRFYRCKSCNICDGNAQSSKAALPKDVSGFCRRCGNHGMQVLDKPWHATNCRYGACPCTRCMGFCVFCMFHDIEKYDHRQHSQACKFRGSCLCSRCAGERRRMGVDLKESPTKAAQEAENKKEKTVTDETRVIEPGRTSATTIKNVPPSQSSACFRELCVFCKLHGQEKEDNGQHAQFCKLRNQCPCGLCLGERRRQGLVVKDSSAEVENLIATDQPRQIEQGKTQAEEIKNVRNVSSSQPSGCRSSGSRPLCVFCKFHDQEKFDVGMHAKFCKFRGECACSCCVEERQRLGLDAKDSSAKAEKPAEEKPEEPTVDQPRCSQQKAQASLHTTKTDTSKTKNQPALQTADKRKGDRIVLPEPKRAHIERKPYCLYCLNHGWQFPMKSHHVLVCMYRNCRCFACRTVRSELKALKTCNYTFSPPKKSVAVAPPNPRTVPNQSLMNSEKSANEPTLGEKASSVKPALKDSAFKSDTNTAEEPAPTVKLDKSAPTCEARNVSVSLHTAEQSTSDKIDNHIVPKAKKMLKDSSLQENLNGEGLPEEEAAETTMREKAAVCEVVVVNGEDFAVVDEVGADTSSDEISSSQETLPDLSTSNSNTILSHDLAKQTPFKDEEVNECPAGSSLEHALNSVAGLKEISDINPNLNGTSAFCTKPQGDTTSTDRVVRESGESRGDLSDIPGTRMTGSLRNAEVVDCTMKHSTNLGSTQKTDIAGDGHHGTIEKGNEDALLIISKAKQSDNSIGEDLEKRKSASGPLFTKISDEREVPSASSLLSLAINEVVGTFYKSPAEEDGRASNEDNAQGVKDNGKEIQARAASIVDDVGNVLGSAIGVSEIDGTSLSTKPSTVDGKTPNESTAKMEGEECGTEKETRGSTSSPTVVEVSSEVSPAASDVLNEVDGTLSTKPPTEDRKMSNEDLAHEVEEKFETERGIQASCPSPIVDEASNVASSITTDVLSEVDGTFYTNPSTVDGNPPIEGISQGDVEKCGTEKEIQGRTLTPTVVEVRNEVPPPASKTGYEKTQSEASAQRGAEECDPVKEIQALTAPPSRELSNVAPPASADCFDKASSKLCAEDSAKTSTNPTSEHHGKGTPECSTENVSEIESQTPGDKPSAEQCEIASLLNELAEFGKNLRPYERYARSANLGNLFTNLPEKPKAPEKSTSVLPNVSPGKKETPNPLPVSGNSSSDKCAENSPRTNKMEEQIESSNKKKQSTNACTTCNKEFPSSQQLRLHTYFQHQLDLESKDPKIKCRECSFESSNQLVLCDHESTHMGLVPLQRLFCLFGQVRQVLRFPKDGSAETK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -