Ffus021363.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- -
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010001270.1:3392469-3405481[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.8e-08 5.8e-05 23.7 8.1 4 40 24 59 21 65 0.88 2 6 1.6e-11 5.1e-08 33.4 12.2 3 42 149 187 148 192 0.92 3 6 2.6e-12 8.2e-09 36.0 9.8 4 43 324 362 322 365 0.92 4 6 0.072 2.3e+02 2.6 0.2 3 14 433 444 431 450 0.83 5 6 2.5 7.9e+03 -2.4 0.4 3 8 517 522 515 524 0.76 6 6 0.00047 1.5 9.6 9.8 4 35 960 989 958 993 0.88
Sequence Information
- Coding Sequence
- ATGGAGTGTGAACAGAGAGCGGCGAGAGTGTGGCCAGGAAGGCTGTCAACGCCACCACCGGCGCCGCGGATGTGCGGGGTGTGCAGGCTCCACGGGGACCTCGTTCCGCGGCGTGGACACGACCCCTGTCCGCTGAAGCACTGCCGCTGCTCGCTTTGCGACGTCCGAAGAAAGCGTCTTTTGCAGAAAAAGCAGCGCGAGCACCTGGGTGAAGATCAGAGCAGAGAGCGGGGTGAAGAGCAAGACGAAGTGCAGGGTGAAGAGCAGGGCGAGGAATCGGGTGAAGAACAGGTTGAAAGGAACAGCGAAGTGCAGGATGAAGAGCAGGGTGagcagcacggcgagcagcagcgggaggagcCCGGTGAAAGTGTGGGCGAGGAGCAAGGCGAAGAGCAGGGCGAGCATCAGGAAAAGCGGCAAGGTGACCAGCGAGGCCTCGCTAAGAAATGCAGCCTTTGCCTACAGCACGGCACCGAGGTACTAAGGAAAGGCCATAAAGCTTGTCCCTTCGAGAACTGCCCGTGCGCCGGTTGCTGCTATGTTCGAAAAAGGCGGCTTTCTCAGAGAAAAGAGGAAAGGAAAACCGCCCATTTAACCAGCAGTTGGAGCAAGCTGCAGGACGAGCGGCaggcagagcagcagcgcggggagccGGCTGAAGATCAAGGCGAAGAGCAGGGTGAAGAGCAGGGCGAGCAACATGCCCAACAGCAGACTGGGCAGCACGACGAAGGGCAAGACAAAACGCAGGGTGAAGAGCGGGGTGAGCAAAACGGCGAGCAGCAGGAAAAGCAACAGCGCGAGGAGCCAGGTGAAGGTGAGGACGAAGTGCAAGAAGaagagcagggcgggcagcaagCCGAGCAGCAGCTGGAGGAGCCGGATAAAAGGGAGAGCGAAGAGCAAGGCAAAGAGCAGGGAGAGCAACAGGGAAAGCGACAAGAAGAGCAGCGGCGCCTCGTTCAGAAATGCCTCCTTTGCCTGAAGCACGGCAAGGAGGTACGCTGGAAAGGTCATAAATCTTGTCCCTTCGAGAACTGCCCGTGCGCGGGCTGCTCCCTTGTCCGGCATAGGAGGCTTTTGAGGAGAAAGCCGAGGCCGTACCATAAAAGCGCCCCGTTACCCAACGGCCTCAACGAGCCGCAGGGCGACCAGTGGGTCAAGAAACCGGGAAAGCAGCACGCCGAGCATCAGGAcaagcagcaggccgagcaggagGACACGCAGCAGCGCAAGCAGCAGCGCAAGCAACGGCGCAAGCAGCAGCGCAAGCAGTGGGGCCGCCGCAGTACTCGCAAATGTAACCTCTGCCTGAAGCACGGTCTGGGCTCCGTCCTGACCCGCAGGCTGAGGAAGCTACGCCACAAAGCCGATGACATGCCGCCGCCGACCCTGGAGCTCAGCCACGATGAGGAAGCCGGCGACGAGGATCCGACCAACGCCTTCGTGCGGGCGCTGCGCAGCTGGGCGGCCAGGAAGATGGgggcctccgcctgctccgccacgGCCGCTGCAGCCGGAGGCGACGCGGAGGAAGAAAAGCCGTCGGCGTGCGCACGCTGCGGGGACATGGTGGACCCCGGCGCGGCCAGACGCGGGGCGCACGTCTGCCGGGACGTGGAGGATGCGGgtcccgcgggcgcgcggctggcggAGAGCCTCGTCTTTCGCATGACCGTCTGCATGCAGTGCGACACGGCTGTGGAGTGGGACAAGCTCTGCCGCTGCTTTCAGGCCGACGGAGACGAGCTCGAGCCACCCTGCGGCGAGCTCGTGGAGGCAGACGAACATGGTGCTGGTGACATGCCCCGTCTGTCGCCTCAGGATACGCCTTCCGCCGCCTACAAGACAAGGAGCTCGCATCACGCGGATGAGGACAAAGATGGGCCGGCCTTGTCACGTAAAATTGCAGAACACAAGACTTATCAAAATAAGAAACCCATGTCTAATGTGATGAACGCTGTTGAAAATGAACTACACAGCAATCCACCCCTCCAAACAAGACTGTCAGGGATCCGTGCGCTGGCAAAGGAACAAAAGACTGAACCCGCACCGATAGCCTCTCTAGCGACTGACTACGTCAAGGTTGAATACCTAGTCTCGCCAACGAAGGGCTTACAGACTGAGGAGCCCGTACTGAGTAAAGCGCCACAGACAGTCGCTGTCAGGAGTGAACCATCGCGCCTGAAAACAGAACCGGTAGCTACGCCACCGTGTGTGGTAATTGACGATGATGACGAGGAGACTGATGAGCCCGTACTGATTGAAGCACCACTGACGCATGCTGACAAGATGAAACGACCGCTCCTGGAAACGGGACGGGCGCCTTCGCCACCGTGTATGGTGATCgtcgacgacgaggaggaggttgccccgcagcagcgctcGTCAGCCCCGGCGGATCTCCGCGGGAGGAAGTCAGCGACCGTCGACGACTCGGCCCAGTCGTGCCTGCTGTGCCTGCTGAGCGCCGAGAGCGGCGCCGACGCCACCGGGCTCACCACGGACCTCCTGGACGCGCACATGGGCGACGTCCATGGCGGCGTCGCGGGCGACGCGTTCTGCTCCTCGTGTCTGCGCCGGTTCCGCGACGAGGCGACGCTGCGCGCCCACATGTCCCGGAGCCACCCGGGCGGGCCGTcgggcctcgccgcccccgcccccgcgctctcgTTCTCGTGCTCGAGCTGCGGGTTCTGGTGCGGGGACCGGGCGACCCTCCGCACGCACCAGGAGGTGTACCACCTGGGGCTCGTGCCGCTCGCCCGCCTGCAGGacctggccgcgctgctgcttgggctgcgCCTCGGCAAGGAGGACCTCCAGCCCCAGCTGGGGGAACGCGTGAGcccgcaggccccggccccgcaggccctgTGCGCGGAGTGTTGGCGCCACGGGCAGCACGCCGCGAGAGACCACCGACCGTGCGCCTACAGTCTCTGCCAGTGTGATCTGTGTGTCAGACGGAATCCCAACAACGGGCCTGTCAAGAGGCGCGTGTTCAGTGTTGGGGACGAAACGCTCGAGGAATAA
- Protein Sequence
- MECEQRAARVWPGRLSTPPPAPRMCGVCRLHGDLVPRRGHDPCPLKHCRCSLCDVRRKRLLQKKQREHLGEDQSRERGEEQDEVQGEEQGEESGEEQVERNSEVQDEEQGEQHGEQQREEPGESVGEEQGEEQGEHQEKRQGDQRGLAKKCSLCLQHGTEVLRKGHKACPFENCPCAGCCYVRKRRLSQRKEERKTAHLTSSWSKLQDERQAEQQRGEPAEDQGEEQGEEQGEQHAQQQTGQHDEGQDKTQGEERGEQNGEQQEKQQREEPGEGEDEVQEEEQGGQQAEQQLEEPDKRESEEQGKEQGEQQGKRQEEQRRLVQKCLLCLKHGKEVRWKGHKSCPFENCPCAGCSLVRHRRLLRRKPRPYHKSAPLPNGLNEPQGDQWVKKPGKQHAEHQDKQQAEQEDTQQRKQQRKQRRKQQRKQWGRRSTRKCNLCLKHGLGSVLTRRLRKLRHKADDMPPPTLELSHDEEAGDEDPTNAFVRALRSWAARKMGASACSATAAAAGGDAEEEKPSACARCGDMVDPGAARRGAHVCRDVEDAGPAGARLAESLVFRMTVCMQCDTAVEWDKLCRCFQADGDELEPPCGELVEADEHGAGDMPRLSPQDTPSAAYKTRSSHHADEDKDGPALSRKIAEHKTYQNKKPMSNVMNAVENELHSNPPLQTRLSGIRALAKEQKTEPAPIASLATDYVKVEYLVSPTKGLQTEEPVLSKAPQTVAVRSEPSRLKTEPVATPPCVVIDDDDEETDEPVLIEAPLTHADKMKRPLLETGRAPSPPCMVIVDDEEEVAPQQRSSAPADLRGRKSATVDDSAQSCLLCLLSAESGADATGLTTDLLDAHMGDVHGGVAGDAFCSSCLRRFRDEATLRAHMSRSHPGGPSGLAAPAPALSFSCSSCGFWCGDRATLRTHQEVYHLGLVPLARLQDLAALLLGLRLGKEDLQPQLGERVSPQAPAPQALCAECWRHGQHAARDHRPCAYSLCQCDLCVRRNPNNGPVKRRVFSVGDETLEE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -