Basic Information

Insect: Formica aserva
Gene Symbol: FTZ-F1_1
Assembly: GCA_037039905.1
Location: JAXRKO010000005.1:3713108-3715847[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.6e-90 4.5e-86 291.3 7.1 1 408 13 424 13 425 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.6e-90	4.5e-86	291.3	7.1	1	408	13	424	13	425	0.73

Sequence Information

Coding Sequence: ATGAGCGCAAAGTCAACGATTCTTCCTGTTGTTCCAGCTGTGCGAGCAGACAGGATGCGGGGAGGTAGAAACAAATTCGGACCCATGTACAAGAGAGATAGAGCGCGTAAGTTGCAACTTATACGTCAACGACAAATGGCCATTCAGTCGATACGCGGCAGTCTTGGCGACCCATCCAGCTATCCGCCCGCGGTGACGCCGTTGCTGCACATCAAGCAGGAGATCCAAATACCTCAGGTCTCGAGTCTGACCTCGTCACCGGACTCGAGCCCGTCCCCCGCGACCGTGGCCGCTGGCCTGGTCACGACGCAGGCCGGCGGCGCCGGTCAGCACCAGCTGATCGCGCCGTCCACCCAACCCAACATCGGCACCAgcagcggcggcggtggcggtgaCGGCGGTAGCAATCACCTGCACAATCTCAATCCTGGTCTGGATAACAAATCCTGGACCGCCAACTCCACCTCCTCCGGGACGAAGGTCTTCAACTTCGGCGAACAGTCCGCGCAGCCTCACGGCGGCGGGGTGGCGGGCTACGCGCCTAAtcccgccgccgccgccgctctGAAAACGGTTAGTCCGATGATAAGGGACTTCCTGTCATCGATCGATGACCGCGAGTGGCAGACGTCTCTCTTTGGACTCTTACAAAACCAAACGTACAATCAGTGTGAAGTGGACTTGTTCGAATTAATGTGCAAAGTGCTCGATCAGAATCTGTTCTCGCAAGTGGATTGGGCTAGAAATTCGACGTTCTTCAAGGATCTCAAGGTTGACGATCAAATGAAGCTACTACAACACTCTTGGTCGGATATGTTGGTGCTAGACCACCTTCATCAAAGGTTACACAACAGTCTACCCGACGAGATGACACTTCATAATGGCCAAAAGTTTGATCTCCTTTGCCTCGGCCTACTCGGAGTTCCTGCCTTGGCCGATCTCTTCAAAGATCTATCCAAGAAACTTCAGGAACTAAAATTCGACACCTCCGATTACATATGCATGAAATTTCTAATGCTGCTGAATCATGATGTCCGTGGACTAGTAAACAAAAAGCATGTGCAAGAGGGTCACGAGCAGGTTCAACAGACGCTTATGGAGTATACGCTAGCTTGTTACCCATCTCTACCGGATAAGTTTAACAAGCTGCTAGCAGTATTACCGGACATCCACGAGGTGGCAACTAGAGGAGAAGAGCATCTTTATCAGAAGCATTGCAACGGAAGCGCACCGACGCAAACGCTTCTCATGGAGATGCTTCACGCCAAGAGGAAATGA
Protein Sequence: MSAKSTILPVVPAVRADRMRGGRNKFGPMYKRDRARKLQLIRQRQMAIQSIRGSLGDPSSYPPAVTPLLHIKQEIQIPQVSSLTSSPDSSPSPATVAAGLVTTQAGGAGQHQLIAPSTQPNIGTSSGGGGGDGGSNHLHNLNPGLDNKSWTANSTSSGTKVFNFGEQSAQPHGGGVAGYAPNPAAAAALKTVSPMIRDFLSSIDDREWQTSLFGLLQNQTYNQCEVDLFELMCKVLDQNLFSQVDWARNSTFFKDLKVDDQMKLLQHSWSDMLVLDHLHQRLHNSLPDEMTLHNGQKFDLLCLGLLGVPALADLFKDLSKKLQELKFDTSDYICMKFLMLLNHDVRGLVNKKHVQEGHEQVQQTLMEYTLACYPSLPDKFNKLLAVLPDIHEVATRGEEHLYQKHCNGSAPTQTLLMEMLHAKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01245297;
90% Identity: iTF_00729406; iTF_00109868; iTF_00109899; iTF_01245297; iTF_01245261; iTF_00264310; iTF_00264365; iTF_01254831; iTF_01254833; iTF_01254879; iTF_00280031; iTF_00280004;
80% Identity: iTF_00729406;