Fase012718.1
Basic Information
- Insect
- Formica aserva
- Gene Symbol
- dmd-4
- Assembly
- GCA_037039905.1
- Location
- JAXRKO010000010.1:1340524-1344503[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-25 1.5e-21 77.4 10.7 1 47 24 70 24 70 0.99 2 2 0.2 2e+03 0.2 0.4 2 9 372 379 371 381 0.83
Sequence Information
- Coding Sequence
- ATGCTTCGCGGCAGGAGCAAGAACAGGCCGGAGAACAACGAGAACAACGAGGGAACGGACGGTAAACAGAGGAGACCGAAATGCGCCCGTTGCAGAAATCACGGTCTCATCTCGTGGCTGCGGGGCCACAAGCGGGAATGTCGTTACCGGGAGTGCCTGTGCCCCAAATGTTCACTGATCGCCGAACGGCAGCGAGTGATGGCCGCCCAGGTTGCCCTAAAGAGACAGCAGGCTGCCGAGGACGCGATCGCCCTTAAAATGGCGAAGGTAGCAACCGGACAGAAGCTCGATCGACTTCCGCCGGGGAAGATCTTCGGAATGTCGGTGACGGAGCCAAAATCAACGATGGATCAAAATGAGGATACAATTCCCGCTTCGAAGAAGCTCGATAAAATTTCCGAGGATTCGAAGGATCTTCCATGTGTGTCGACCAACGATACTTCTCGTCTTCAAAATTATTCTGACGATTTGGAAAACTGTTCGAAATCCAAAAGCCTCCTCTTCGATACCAGCAAGCTGGAGGACTCCAAACAGTCCATCCCGGTGTCCCAGACCTCCGTGGAAACTTTAGCCCGCCTCTTTCCAAATACCAAGCTATCAGTCTTGCAACTGGTGTTGCAACGCTGCGGCCAGGATCTGTTGAAGGCGATCGAGTACTTTGCAAGCGACAATCTGGGCATCGTTGAACCAGCCATGTCGACCGGTATCGGTCACGCGTCTTCGGCCTTTCGACCTCCGCAGACGACGATCAGCGTCGACAGTGGTGCTGGGGAACAACAACAGCAACCGATTTCCGGCACGATGCTGGCACCGATCTATACCAGCCTGTCCAGAAACGTCTACGGGGACGCGGGTTACTGTCTACTGAACATCCTGCCGACCGCGGAGCAATTCGCCAAGGGTACCGATCTGCCGATCACGAAAACCGTGGCCGAGCCTCAGGAGGCCGTCGCGCTAAATTTTCgctataacaattattttactccCATGCAACAGCAACTGAGAGATGCGCACTTGTGCGCACAAGTGGCGGCAGATCGACTGTCGGCTGCTAGATCAGCCAGCATCCTGCATCATCTGCCGCCTGCCGTACTGCCAGGAATCCCTTGTGTGCAGCCGAATTGTGCGCAgtgcaattataaatttgcatGA
- Protein Sequence
- MLRGRSKNRPENNENNEGTDGKQRRPKCARCRNHGLISWLRGHKRECRYRECLCPKCSLIAERQRVMAAQVALKRQQAAEDAIALKMAKVATGQKLDRLPPGKIFGMSVTEPKSTMDQNEDTIPASKKLDKISEDSKDLPCVSTNDTSRLQNYSDDLENCSKSKSLLFDTSKLEDSKQSIPVSQTSVETLARLFPNTKLSVLQLVLQRCGQDLLKAIEYFASDNLGIVEPAMSTGIGHASSAFRPPQTTISVDSGAGEQQQQPISGTMLAPIYTSLSRNVYGDAGYCLLNILPTAEQFAKGTDLPITKTVAEPQEAVALNFRYNNYFTPMQQQLRDAHLCAQVAADRLSAARSASILHHLPPAVLPGIPCVQPNCAQCNYKFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476936;
- 90% Identity
- iTF_01254818;
- 80% Identity
- -