Fase004126.1
Basic Information
- Insect
- Formica aserva
- Gene Symbol
- Rel
- Assembly
- GCA_037039905.1
- Location
- JAXRKO010000003.1:3663110-3668128[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-43 2.9e-39 136.2 0.4 1 168 90 279 90 280 0.91 2 2 0.77 1.3e+04 -2.6 0.0 65 110 785 829 748 865 0.69
Sequence Information
- Coding Sequence
- ATGCCTGATGCGTACGAGAATTTTAACATGGCGATGCGGAGTATGTTGACGACCAGTGGTATCATGGATAATGATGCGGACCCCTCGTACTTTCCATTTAATGatTTGACATTGATAGGCAGTACAAGTGGTCTAAGCCCATACAGTGAATCTCAGGAGAATATGAGCATTACATCACCTATGTCAACATCTTTGTCACCTATGCATGTTacagacaattatattaatctatcCAATGCTACAGtacaAGTACTTGGTGAACCATACATTAGTATCTTGGTGCAACCAATGgataaatttagatttcgatacaGATCTGAAATGGTAGGGACACATGGGAGTTTGTTAGGTGTATCAAATGGACGTAGacggaataaaaataatgtaccAACAGTCCAAttacataattttttggaTAAAGCAACAATACGATGCACATTGGTTACAACGGACGACGAACATATACCGCACGCTCATAGATTAGTGAGACGTATGGGTACCACGGATGTAGATGATCCACATGATATAGAAGTTTCACCTACAAATGATTTTATAGCTGAATTCAATAGTATGGGAATAATACATActgcaagaaaaaatattaaagaagaaataatacgAAAATTATGTGCAGCAATTTTAGAGGAACGCAAGCGTTCAAATATTAATGCTACTCTTAGCCTCCGCGATAATGCACAGATTAGAGCTGATGCGGAACATTATCAGAAgactataaatttaaatacagtCACTCTCTGTTTTCAAGGTTTTATCAAAGATGAACATAATGTCATGAGATCAATTACAAGGCCGGTTTATAGCAATCCAATCAATAATTTAAaaagcGCATTAACTGGGGAGCTTAAAATATGCAGAATTGATAAGTATACCAGCAGCTGTGAAGGTGGAGAAGAAGTGTTCATACTTGTAGAGAAAGTTTCAAAAAaaaatataaaaataaagttttttgaACTGAATGATGATGACATTGAGATCTGGACTGATTATGGTCGTTTCTCGGAACTAGATGTCCATCATCAATATGCCATGGTATTTCGAACTCCACCGTACAAGGATCTATATATTACTTCTCCAAGAGAAGTCTTCATACAATTGGAACGTCCTTCGGATTCAGATTGTTCAGAAGCAATTAAATTCACATATAAGCCTAGCGATCGTATGATAGGTAGAAAAAGAACGCGAGTCTCTTATTCGAATAGTGGGGAATTAGCACAAATGACGTGTAATCCAGATATACCGTTAATGAATACGCCGTTAATGAATACGCCACTAACGAATGTACCTTCAAGCAATGAAAGTACCGAAATttctaaagaaataaaaaagatgttaGAGGATAGATGCTCTTCCAGTGAGTTCAAGGATTTTGTTGAACACATAAATCTAGAATTGTATGAGAGTTTAGTAACCCAAagcgaagaaaataaattaacttatGATGGAGCATCAAGCAAAAAGGATGATGAAATGTttgctaaaaatattattatcgatacAATAAATAGTATCAAAGCAAACCCAGATAAATCTAaggatattataataaatatgtttaaaaacaGAACAACTTATGGTGATTCACCGCTACATTGTGCACTCCGATATgggcaaaaaaatattataaagcatATTCTAATGCTTATGAGTGTACTAAAAACAAATGCTGAAGAGTTAGTGAATATTCAAAATAGTTCTGGCAAGACTCCATTGCATTATGCTGTTTCACAAGAACATGCAGAAATTACGAAAGCATTGCTCATGCTTGGTGCAGATCCAAACATATCTGACCATTATGGACAAATGCCATTGCACAGAGCTGTTCAATTTCCAGAAGCGAAAGCAAGTATTGATGTTTTATTGAGTGAAGAAAAAATCAACATTGAAGCAAATACAGATTTAGGGTGGACACCTTTACAATTAGCTGCTGAGGCGGGCTCATACTATGCAGTACGCTCTCTCGTTAAAGCCGGTGCAAACGTAAATAATACTGATATGTCTTATGGAAGAACAGCTTTACATATAGCGGTCGAAGGAGGTCACAAAGATATAGTGGAATTCctgttaaaaaatACCAAAATAGATGTTAACAAAAGAAACTTCAGTGGAAATACAGCGTTACATACTGCGGTAGTTACACCTGGGATGAAAGCGAAAGAAATATGTGTTCTCCTATTGAAATATGGCGCTAATCCATATATAAGGAATTTTAATTGTGAGCCAAGCAATATTGAAAGGGAAcaagtacaaaatataaaaactgaaaTACACTCGGATGATGAAAACATGAAAGAATCCGTTGGGCAATCATCTTTCGACTTAGCCTCAAACAAACCAGATATCTTACAGCTTGTTTCCAGTCAATGTGATGCATCATTAGAAACAATTAAatgtaaagaagaaaatatcgatgatatacaaaaagtttgGATGGATGCAATCCAGGAAAAACAATTAGCAGCTATCCTAGATGAGACAAAAGGATGGAAGAAATTAGCCCGTCATttgaattttgaaaatttatttaatacgtttGAAGAGAGTTCATCCAGTTCAACATTACTCTTTTTGAATTACATTGCtATACAAACCAGTATATCTCTCAGCGAACTGCAAAATATACTGCAGAGCATAGGCGAAGAAGATGCTGCTGTATATATGGGACAAGTTTTATCTATACATGAAAATACGAGTCatgcatttttaaaatga
- Protein Sequence
- MPDAYENFNMAMRSMLTTSGIMDNDADPSYFPFNDLTLIGSTSGLSPYSESQENMSITSPMSTSLSPMHVTDNYINLSNATVQVLGEPYISILVQPMDKFRFRYRSEMVGTHGSLLGVSNGRRRNKNNVPTVQLHNFLDKATIRCTLVTTDDEHIPHAHRLVRRMGTTDVDDPHDIEVSPTNDFIAEFNSMGIIHTARKNIKEEIIRKLCAAILEERKRSNINATLSLRDNAQIRADAEHYQKTINLNTVTLCFQGFIKDEHNVMRSITRPVYSNPINNLKSALTGELKICRIDKYTSSCEGGEEVFILVEKVSKKNIKIKFFELNDDDIEIWTDYGRFSELDVHHQYAMVFRTPPYKDLYITSPREVFIQLERPSDSDCSEAIKFTYKPSDRMIGRKRTRVSYSNSGELAQMTCNPDIPLMNTPLMNTPLTNVPSSNESTEISKEIKKMLEDRCSSSEFKDFVEHINLELYESLVTQSEENKLTYDGASSKKDDEMFAKNIIIDTINSIKANPDKSKDIIINMFKNRTTYGDSPLHCALRYGQKNIIKHILMLMSVLKTNAEELVNIQNSSGKTPLHYAVSQEHAEITKALLMLGADPNISDHYGQMPLHRAVQFPEAKASIDVLLSEEKINIEANTDLGWTPLQLAAEAGSYYAVRSLVKAGANVNNTDMSYGRTALHIAVEGGHKDIVEFLLKNTKIDVNKRNFSGNTALHTAVVTPGMKAKEICVLLLKYGANPYIRNFNCEPSNIEREQVQNIKTEIHSDDENMKESVGQSSFDLASNKPDILQLVSSQCDASLETIKCKEENIDDIQKVWMDAIQEKQLAAILDETKGWKKLARHLNFENLFNTFEESSSSSTLLFLNYIAIQTSISLSELQNILQSIGEEDAAVYMGQVLSIHENTSHAFLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01077246;
- 90% Identity
- iTF_00729840;
- 80% Identity
- -