Fatl057198.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- Hr39
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000011.1:40347121-40374832[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.54 1e+04 -2.1 0.9 58 129 145 224 97 270 0.54 2 6 0.76 1.4e+04 -2.6 2.6 76 157 304 397 264 412 0.58 3 6 0.56 1.1e+04 -2.2 3.0 85 160 619 694 569 717 0.48 4 6 0.48 9.1e+03 -2.0 0.7 79 128 831 881 786 929 0.59 5 6 3.4e-08 0.00063 21.6 0.0 1 26 1019 1044 1019 1086 0.87 6 6 9.9e-66 1.9e-61 211.1 0.0 210 408 1125 1318 1115 1318 0.98
Sequence Information
- Coding Sequence
- ATGGTAGAGGGTAAGAAGAGAGAGGACGGAGACGGGGAGAGTGTGGAGCGGCCAATGTCCTGGGAGGGCGAACTGTCCGACTGTGAGATGCCGACCATCAAGCGGGGTAAGAAGAGAGAGGATGGGGACGGGGAGAGTGTGGAGCGGCCAATGTCCTGGGAGGGCGAACTGTCTGACTGTGAGATGCCGACCATCAAGCGGGAGGAGGAGAGGGAGATGGAGGGGGTGCAGGTGACGACGTCGAGTGTTCGACAGCCGGCCGCTGACGACAGCAAGCCCCGCCCGCTCAAGTTCACCAACGAAGCCATGGTACGTCACATGTCTGTGCTACTGGAAAAGATGGACAAGGTGATGGAACACGTGAGAGCCAACAACCTGAGCGGCCAGACCGACCTGCCACTGCTGGTCGACCGACTGCTCAGTGGCAGCAGTGGGTACAGCCCCGTGTTGCCCCAGAGGCACGGCGGGGGCCCCACGCCCAGCCCCGACTCTGCGGTCTACAGCTGCTACAGCCCCACCGCCAGCCCCGTCACGTCCCGCCACACGCTGCCCTCGCCCTCGCTCAGCCGCAACAACTCTGACGCCAGCCAGTACGGCGGCTCCCAACATTCCAGCTGCTACAGCCAAAGCTGCTACAGCCAAAGGTTGGTTCACGCAACATGTTGGACACAAGTCAATAGTCAATACGGTTCGCAACCTTCCATCGCAACAGCTGCTACAGCCAAAGGTAAGTTCACGCAACATGTTGGACACAAGTCAATAGTCAATACGGCTCGCAACCTTCCATCGCAACAGCTGCTACAGCCAAAGGTAGGTTCACGCAACATGTTGGACACAAGTCAATACGGTTCGCAACCTTCCATCGCAACAGCTGCTACAGCCAAAGCAACAGCTGCTACAGCCAAAGGTAAGTTCACGCAACATGTTGGACACAAGTCAATAGTCAATACGGCTCGCAACCTTCCATCGCAACAGCTGCTACAGCCAAAGGTCCGGTGGCCCACTGACCCCGATACCAGGAAGTCTGCCCCATTTATACAACCGTATACTACCGACGGCCTTGCCCTCAGAGCAATAGCCTCAGCGTTGTTACCACAACACCTCCAGCACGCTTCCTACAATATACATCCGCCTCTTTCTCAACCACCTTCCTCCCTGAAATCTACATTTCTTAAATCTACATATTTAGAACCCTACTCCCCCGTCAAAGGTTCCAGCTGCTACAGCCAAAGTGAGGAAGAGGTAGTGAGAGGTTCAAATGGTGGACAAAATTTTGAGCTAGTTCCTCTCAATAAGTCAGTGGATGATCTAGAACAGGAACTTGACTCTATCGATGAGTCAGAGAATGGTCAAGAACAGGGACTTAAGTGTGCCAATGACTCAGTGCATAATAACGGCATGGGCCTACCAGGGCCTTCTAATTCTATTTACAATGCGAATTGTAAAGATTGTAAAGTTGCCATCGGCCCTCAAACAAATATAACTGTGGTGGTTCAAAGATTACCAAAAGGTAAAACTCCCAATGAACTGAGGAACCTTATACGCCTACCCCAAACACCAGCCCCTGTCTTTGAACGGCTTAACATCGATAGCAGTAACTTGAACAAATTATCTTGCGTTATTGTAGCTATTGTGGTGGTCACTGTTCTGTTGGCTGCTTTGGTGGTGATTTTGTTCGTAGAGGTTTTAAAGGTTAATCGTATCGCTGATTCCAAATACCGGCAGGATTTAATTCAGTTAAATTTATCATCTACCAAAATTGCTGGAATGAATGTTTCTTTTGAAAATGCAACGATTAAACCGACACAAGTTGCCAGAAGACCAGAAGTGACGATGCCTGTGGAAGGGAATGCTGATGTTCAATCATTTGGAAGTAGTTCTACCCCCAGGTCATCAGAAGAAACTTCAAAATCAAGCGCAACATCACCAACAAAAATTGCCATGAGAACAGAAGTGCCTGTGGAAGAAAATGGTGATGTCTATACTTCCAGAAGTAGTTCTGCCATCAGGTCATCAACAGAAATGTCAAAAACATTCATGTCAGATGAAAGAGGTGCCCAAACCGAGGAAACTAGCACAGCCAAGCGCCATGAGAGTGCTTGTCAACTGGAGGACAACGAAAGTGTATTGAATATTTCAACAATTGACCGAGATTTTAATGTTAGCCTTTTGAATGGATATGAAAAATTGACTCGTATAGTTAAAAACTACATTCTGGTGAGGATTGAACTTCTTCGAAGTGATTGTTATGATTTTAAGACTTGTCTTCAACTAGTAGAAGACAAGAGGAACGCTTTTGTCCACGACAGGAATGTGTTAAGTGTGCGGTTGAGAGACACGTGCAAAGCGACCTCCGATCCCTCAACTTGTCCCAGCTGCGATGAAGCTTGTACAGAGTTCAGGACTACCAAGGTCAAGGTTCAGAGTGCAGAGGGTATACCCAGCGGCCCAGGTAAGTCGTCGCTCTCTCGCCTGCTGACCGTCGTCCAGTCAACATCATCCTCCACCACGATGCAAGATTACTCGTCGGTGTCAGTGTCGCCAACCCAGTTTTCACCCACCCACTCGCCCATCCAGGGGCGCCACCTTCACAGGCCCAACACGGGATTTCCCTCGCCCGTGTTAAATTCCCGGACGGCCCAGGACTATTCTGTACAAGGGAGTCTGGTGTACGGAGTGAACAGGACCAGCCTAGCAACAGTAGAGGACAGCCCTCACGACAACACCAGTGTCGACGCCAATGACGAGGATGATCGCATGTCGGTGTTGGCGGCGGAGCTGGTGCAACATTCCGGGGGCCTCGCCACGCCGCCGGGCATTAGCCGCCAGCAGCTCATCAACAGTCCATGTCCCATCTGCGGGGACAAGATCTCCGGGTTCCACTACGGGATCTTCTCGTGCGAGAGCTGCAAGGGGTTCTTCAAGCGAACGGTGCAGAACCGCAAGAACTACGTGTGCCTGCGCGGCTCCAGCTGTCCCGTCACCATCGCCACACGCAAGAAGTGCCCCGCCTGTCGCTTCGACAAGTGCCTCAACATGGGCATGAAGCTGGAAGCGATACGAGAGGACAGGACGCGGGGCGGCCGCAGCACGTACCAGTGTTCGTACACACTCCCCGCCAGCCTGATGTCCCCGCCGGTGGACAGCCCCCGCCTGGACACCCCCGTCAAGCTGGAAGCGGGGGAGGCGCCCCACACGAGGCTGGTCCCGCCACTGCTGCAGGAAATCATGGAGGTGGAACACCTGTGGCAGTACAACGAACCGGGCGGCGCCGGGGACACAAGtaacggcggcggcggcgggggcggcggcggtGGGGGCAGAGTGGGGGGCGGCCCTGCCTCCCAGAGCGGGGGCGGTGGGGGGGACTTCTTGGCTAACCTCTGCAACATCGCCGACCATCGGCTGTACAAGATAGTCAAGTGGTGCAAGTCGCTGCCGCTGTTCAAGAATATTACGATCGACGACCAGATCTCGCTGCTGATCAACGCGTGGTGCGAGCTGCTGCTGTTCTCATGCTGCTTCCGCTCGATGTCGTCGCCCGGCGAGATCCGCGTCTCGCTAGGGAAGTGTATCTCGCTGAGCCAGGCGCGGGAGCTCGGACTCGGTCCTGCCATCGAGCGGATGCTCAACTTCACGGAACACCTGCGGCGCCTCCGCGTCGACCGGTACGAGTATGTCGCGATGAAGGTCATCGTCCTCCTTACTTCTGATGCCAGTGACCTGAGGGAGCCAGAGAAGGTGAGAGCGTCGCAGGAGAAAGCGCTTCAGGCGCTGCAGCACTACACACTGGCCCACTACCCGGACATTCCGTCCAAGTTCGGCGAACTGCTGCTCAGAATACCCGACCTGCAGCGCACCTGCCAGGTGGGCAAGGAGATGTTGTCAATGAAGAACAAGGAGGGGGAGGGCCCCAGCTTCGACCTGTTACTGGAGCTGCTCCGCGGAGACCACTGA
- Protein Sequence
- MVEGKKREDGDGESVERPMSWEGELSDCEMPTIKRGKKREDGDGESVERPMSWEGELSDCEMPTIKREEEREMEGVQVTTSSVRQPAADDSKPRPLKFTNEAMVRHMSVLLEKMDKVMEHVRANNLSGQTDLPLLVDRLLSGSSGYSPVLPQRHGGGPTPSPDSAVYSCYSPTASPVTSRHTLPSPSLSRNNSDASQYGGSQHSSCYSQSCYSQRLVHATCWTQVNSQYGSQPSIATAATAKGKFTQHVGHKSIVNTARNLPSQQLLQPKVGSRNMLDTSQYGSQPSIATAATAKATAATAKGKFTQHVGHKSIVNTARNLPSQQLLQPKVRWPTDPDTRKSAPFIQPYTTDGLALRAIASALLPQHLQHASYNIHPPLSQPPSSLKSTFLKSTYLEPYSPVKGSSCYSQSEEEVVRGSNGGQNFELVPLNKSVDDLEQELDSIDESENGQEQGLKCANDSVHNNGMGLPGPSNSIYNANCKDCKVAIGPQTNITVVVQRLPKGKTPNELRNLIRLPQTPAPVFERLNIDSSNLNKLSCVIVAIVVVTVLLAALVVILFVEVLKVNRIADSKYRQDLIQLNLSSTKIAGMNVSFENATIKPTQVARRPEVTMPVEGNADVQSFGSSSTPRSSEETSKSSATSPTKIAMRTEVPVEENGDVYTSRSSSAIRSSTEMSKTFMSDERGAQTEETSTAKRHESACQLEDNESVLNISTIDRDFNVSLLNGYEKLTRIVKNYILVRIELLRSDCYDFKTCLQLVEDKRNAFVHDRNVLSVRLRDTCKATSDPSTCPSCDEACTEFRTTKVKVQSAEGIPSGPGKSSLSRLLTVVQSTSSSTTMQDYSSVSVSPTQFSPTHSPIQGRHLHRPNTGFPSPVLNSRTAQDYSVQGSLVYGVNRTSLATVEDSPHDNTSVDANDEDDRMSVLAAELVQHSGGLATPPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGSSCPVTIATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCSYTLPASLMSPPVDSPRLDTPVKLEAGEAPHTRLVPPLLQEIMEVEHLWQYNEPGGAGDTSNGGGGGGGGGGGRVGGGPASQSGGGGGDFLANLCNIADHRLYKIVKWCKSLPLFKNITIDDQISLLINAWCELLLFSCCFRSMSSPGEIRVSLGKCISLSQARELGLGPAIERMLNFTEHLRRLRVDRYEYVAMKVIVLLTSDASDLREPEKVRASQEKALQALQHYTLAHYPDIPSKFGELLLRIPDLQRTCQVGKEMLSMKNKEGEGPSFDLLLELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00727531;
- 90% Identity
- iTF_00727531;
- 80% Identity
- iTF_00727531;