Fatl034445.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- dmd-4
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000005.1:57975991-57981309[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.6 8.8e+04 -4.2 0.4 29 33 305 309 304 313 0.71 2 3 7.8e-25 1e-20 75.6 12.9 1 47 362 408 362 408 0.99 3 3 0.19 2.5e+03 0.7 0.7 28 35 646 653 638 655 0.88
Sequence Information
- Coding Sequence
- atgtccagATCGCGGTATGGCGGAGACGGGGAAGGGAGCGCGCCGGCCCAAGTGTGCGCGGTGCCGCAACCACGGCATGATCTCCTGGCTACTGCAGGTACCTGCCAGTGCCACCACCTAACGTCAGTGCCCTCTGTCCCACAGTCGCGGTATGGCGGAGACGGAGAAGGGAGCGCGCCGGCCCAAGTGCGCGCGGTGCCACAACCACGGCATGATCTCCTGGCTACTGCAGGTACCTGCCAGTGCCACCACCTAACGTCAGTGCCCTCTGTCCCACAGTCGCGGTATGGCGGAGACGGAGAAGGGAGCGCGCCGGCCCAAGTGTGCGCGGTGCCGCAACCACGGCATGATCTCCTGGCTACTGCAGGTACCTGCCAGTGCCACCACCTAACGTCAGTGCCCTCTGTCCCTCAGTCGCGGTATGGCGGAGACGGAGAAGGGAGCGCGCCGGCCCAAGTGTGCGCGGTGCCGCAACCACGGCATGATCTCCTGGCTACTGCAGGTACCTGCCAGTGCCACCACCTAACGTCAGTGCCCTCTGTCCCACAGTCGCGGTATGACGGAGACGGAGAAGGGAGCGCGCCGGCCCAAGTGTGCGCGGTGCCGCAACCACGGCATGATCTCCTGGCTACTGCAGGTACCTGCCAGTGCCACCACCTAACGTCAGTGCCCTCTGTCCCACAGTCGCGGTATGACGGAGACGGAGAGGGGAGCGCGCCGGCCCAAGTGTGCGCGGTGCCGCAACCACGGCATGATCTCCTGGCTACTGCAGGTACCTGCCAGTGCCACCACCTAACGTCAGTGCCCTCTGTCCCACAGTCGCGGTATGGCGGAGACGGAGAAGGGAGCGCGCCGGCCCAAGTGTGCGCGGTGCCGCAACCACGGCATGATCTCCTGGCTACTGCAGGTACCTGCCAGTGCCACCACCTAACGTCAGTGACCTCTGTCCCACAGTCGCGGTATGACGGAGACGGAGAAGGGAGCGCGCCGGCCCAAGTGTGCGCGGTGCCGCAACCACGGCATGATCTCCTGGCTACTGCAGGTACCTGCCATCGCGGTATGGCGGAGACGGAGAAGGGAGCGCGCCGGCCCAAGTGTGCGCGGTGCCGCAACCACGGCATGATCTCCTGGCTGCGCGGCCACAAGCGCCACTGCAGGTTCAAGAACTGCTTCTGCGCCAAGTGCAGCCTCATCGCCGAGCGACAGAGGGTCATGGCCGCTCAGGTGGCGCTGAAGAGACAACAGGCGGCGGAGGACTCCATCGCCCTCGGCCTCACCGCCGTCATGACCGGCAAGAAGTTCGGCTTCCTCCCGCCCGGACCCATCTTCGGCATGTCCGTGCCTGACCCTATAGAAATTTCGGACGCGAGCTCAGTCAAGTCCGGCGGCTCCGAGACGCCGCTGTGCCCGGGAGACTCGGCGCCCCCGACGGCACCCTCCCCGGCGGCGCCCCCGGAGCCCCCGCGCCCCCCGCACCCCTCGCAGTCCTCGCTCGAGCTGCTGGTCCGCCTGTTCCCCGCCAAGAAGCGGTCCGTGCTGGAGCTGGTGCTGCGCCGCTGTGGCCACGACCTGCTCCAGGCCATCGAGCAGTGCGCGCCCGCCTACGATGCCACCAGGCTGGACCGTGAGAGCGAGACGGAGGACTCGGGGGCCGAGGTGGAGGAGCCGAGGGACGAGCGGCcgggggcggcgggggcggcgggggcggcgcaCTCCGCCTTCAAGCCGTTCGTGGCGGGCGCCGAGCCGCTGGACTGCCGCACCCTGGGCTACGCCCGCGGGCTGCTGCTCGCCCCCAGACCCTCCCTGGACTTCTTCCACAGCAGCCTGCCCTCCTCCTTCAGCACCTCCGTGCTGCCCTGTCCATTGTACCAGACTGTACCTCACAGTTCCATGCAAAGTCTATTGTTCCAACATCCGAGTGTCCCGACTGCTCCTTGCTCTTGCGCCCAGTGTCATCCCTCTTCTGGTTAA
- Protein Sequence
- MSRSRYGGDGEGSAPAQVCAVPQPRHDLLATAGTCQCHHLTSVPSVPQSRYGGDGEGSAPAQVRAVPQPRHDLLATAGTCQCHHLTSVPSVPQSRYGGDGEGSAPAQVCAVPQPRHDLLATAGTCQCHHLTSVPSVPQSRYGGDGEGSAPAQVCAVPQPRHDLLATAGTCQCHHLTSVPSVPQSRYDGDGEGSAPAQVCAVPQPRHDLLATAGTCQCHHLTSVPSVPQSRYDGDGEGSAPAQVCAVPQPRHDLLATAGTCQCHHLTSVPSVPQSRYGGDGEGSAPAQVCAVPQPRHDLLATAGTCQCHHLTSVTSVPQSRYDGDGEGSAPAQVCAVPQPRHDLLATAGTCHRGMAETEKGARRPKCARCRNHGMISWLRGHKRHCRFKNCFCAKCSLIAERQRVMAAQVALKRQQAAEDSIALGLTAVMTGKKFGFLPPGPIFGMSVPDPIEISDASSVKSGGSETPLCPGDSAPPTAPSPAAPPEPPRPPHPSQSSLELLVRLFPAKKRSVLELVLRRCGHDLLQAIEQCAPAYDATRLDRESETEDSGAEVEEPRDERPGAAGAAGAAHSAFKPFVAGAEPLDCRTLGYARGLLLAPRPSLDFFHSSLPSSFSTSVLPCPLYQTVPHSSMQSLLFQHPSVPTAPCSCAQCHPSSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -