Fatl050993.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000009.1:49628930-49645928[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-10 3.6e-05 25.6 0.1 279 300 41 62 27 62 0.91 2 2 0.012 5.4e+02 2.0 7.6 120 172 60 112 59 136 0.63
Sequence Information
- Coding Sequence
- ATGGAAGCTTGCACACGGTCCGTCCACCATCCGATCCGGCACGATCGCCGGATAGCAGCCGGACGCTGCCACTGTAGACAGCCGGCGCCGGACCGGCACCGGAAAGACAGTGGCGCATGTGAAGCCAACAAACTGCTTGGAGATTACAAGTTCAAACTGCAGAAGGCGGAACAAGATGTTAACACCCTTCAGGCTAATGTTGCGAGATTAGAAAGCCAAGTAGTTCGGTATAAGTCTATCGCAGAGACTTCAGAAAAATTAGaagatgaattaaaattagaaaaaagaaaattgcaGAGAGAGCTGCGGGAGGCCCAGGCGCGTGTGGAGGAGCTGGAGACCTCCCACTCCCACCTGCAGAGGAGACTGGATAAGCTCAAGAACGCCAAGTCAGCACTGCTCAAGGACTTGTAG
- Protein Sequence
- MEACTRSVHHPIRHDRRIAAGRCHCRQPAPDRHRKDSGACEANKLLGDYKFKLQKAEQDVNTLQANVARLESQVVRYKSIAETSEKLEDELKLEKRKLQRELREAQARVEELETSHSHLQRRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -