Fatl050992.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000009.1:49614629-49626719[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-19 4.7e-15 58.0 0.1 1 68 39 104 39 123 0.75 2 2 1.1e-64 5.2e-60 205.6 13.8 57 255 416 619 392 633 0.88
Sequence Information
- Coding Sequence
- atGTCACCGGACCTGTTCTTACTTCACCTCATTCCAGGGTTCTCACAGATCTGGAACATCAGGCAAGCGAATATTGTTGATATTGCCAATAAAACATGCTGTATGATGCTACAGGCGGAGGCACGGTTGGCAGCCAAGCGTCAGGCCAGAGCCGAGGCCCGCGAGATCAGGATGCGGGAAATAGAGAGGCTTCAGCGGGAGAGTGAGGACAACGATAGAGTCTACGACATCTACTCAACGCCAGATGGAGTGGGCGGGCGGGGAGTGCCGAGGACAGGCTCAGTAACCACGCCGCGGTCGCTGCTCTCCTCGAACAACAGCTACCACTCGCCCGTCTACTGTAGTGATGATGTTGTGTGTTGTACAGATGGAGTGGGCGGGCGGGGGCCCCGAGGGCAGGCTCAGTCACCACGCCGCGGTCGCTGCTCTCCTCCAACAACAGCTACCACTCGCCCGTCTACTGTAGTGATGATGTTGTGTGTTGTACAGATGGAGTGGGCAGGCGGGGGCCCCGAGGGCAGGCTCAGTAACCACGCCGCGGTCGCTGCTCTCCTCCAACAACAGCTACCACTCGCCCCGTCTACTGTAGTGATGTTGATGTTGTGTGTTGTACAGATGGAGTGGGCGGGCGGGGGCCCCGAGGGCAGGCTCAGTCACCACGCCGCGGTCGCTGCTCTCCTCCAACAACAGCTACCACTCGCCCCGTCTACTGTAGTGATGTTGATGTTGTGTGTTGTACAGATGGAGTGGGCGGGCGGGGGTCCCGAGGGCAGGCTCAGTCACCACGCCGCGGTCGCTACTCTCCTCCAACAACAGCTATCACTCGCCCCGTCTACTGTAATGGAGTGGGCGGGCGGTGGGCGCCGAGGACAGGCTCAGTCACCACGCCGCGGTCGCTGCTCTCCTCCAACAACAGCTACCACTCGCCCCATCTACTGTAGTGATGTTGATGTTGTGTGTTGTACAGATGGAGTGGGCGGGTGGTGGGCGCCGAGGGCAGGCTCAGTCACCACGCCGCGGTCGCTGCTCTCCTACAATCCTCCAACAACAGCTACCACTCGCCCCGTCTACTGTAGTGATGTTGATGTTGTATGTTGTACAGATGGAGTGGGCGGGCAGGGGGCGCCGAGGGCAGGCTCAGTCACTACGCCGCAGTCGCTGCTGTCCTCCAACAACAGCTACCACTCGCCCCATGGAGTGGGCGGGCGGGGGGCGCCGAGGGCAGGCTCAGTCACTACGCCGCGGTCGCTGCTGTCCTCCAACAACAGCTACCACTCGTCCCGTCGTAGCTCTGAGGACTCTCTCGAGGAGGTTAATAGCATAAGAGATGTCAGGATGGAGCTGAGGGAGTGCGAGGACAAGTTCCGCAAGGCGATGGTGGCCAACGCGCAGCTGGACAACGAGAAGGCGGCGCTGGCCTTCCAGGTGGACCTGTTCAAGGACAAGTACGAGGAGCTGGAGGAGCAGCACCACCAGCTCACGAGAGAGCACAAGGAGACGTGTCGCCAGCTGGAGCAGACGAAGCGCCACCGGACGAAGCTGCAGGAGGACCTGGACGTGTCGCGGGCCCAGCTGGAGGAGCTGCTGCAGCTGATCCGGGAGAAGGGGCTGGTGGTGGtggagggggaggaggaggaggaggagggcgaggaggaggaggaggagggcgAGGAGGGGGAGCCGAGGACCAAGCCCCCGAGGAAAGCTCTGGTGTCGGCCGAGGTGGCGGACGTGCTGCAGCAGGGGAGCGGCTCGCTAGACGTGCGGCTGAAGCGGTTCGTGGAGGAGCGCAACTCGCTGCTGGACGAGCTGCGGCGGGTGAAGCTGGAGCTGGAGGAGGAGCGAGCCTCGCGCGGCCGCCACAACGGGCCCGCCGACGACCAGGACGACATCCAACGTACGTAG
- Protein Sequence
- MSPDLFLLHLIPGFSQIWNIRQANIVDIANKTCCMMLQAEARLAAKRQARAEAREIRMREIERLQRESEDNDRVYDIYSTPDGVGGRGVPRTGSVTTPRSLLSSNNSYHSPVYCSDDVVCCTDGVGGRGPRGQAQSPRRGRCSPPTTATTRPSTVVMMLCVVQMEWAGGGPEGRLSNHAAVAALLQQQLPLAPSTVVMLMLCVVQMEWAGGGPEGRLSHHAAVAALLQQQLPLAPSTVVMLMLCVVQMEWAGGGPEGRLSHHAAVATLLQQQLSLAPSTVMEWAGGGRRGQAQSPRRGRCSPPTTATTRPIYCSDVDVVCCTDGVGGWWAPRAGSVTTPRSLLSYNPPTTATTRPVYCSDVDVVCCTDGVGGQGAPRAGSVTTPQSLLSSNNSYHSPHGVGGRGAPRAGSVTTPRSLLSSNNSYHSSRRSSEDSLEEVNSIRDVRMELRECEDKFRKAMVANAQLDNEKAALAFQVDLFKDKYEELEEQHHQLTREHKETCRQLEQTKRHRTKLQEDLDVSRAQLEELLQLIREKGLVVVEGEEEEEEGEEEEEEGEEGEPRTKPPRKALVSAEVADVLQQGSGSLDVRLKRFVEERNSLLDELRRVKLELEEERASRGRHNGPADDQDDIQRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -