Fatl076390.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- -
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000026.1:4337292-4341232[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.42 4.5e+02 3.0 0.0 1 17 19 35 19 41 0.91 2 22 0.42 4.5e+02 3.0 0.0 1 17 53 69 53 75 0.91 3 22 0.42 4.5e+02 3.0 0.0 1 17 87 103 87 109 0.91 4 22 0.9 9.7e+02 1.9 0.0 1 16 121 136 121 143 0.85 5 22 0.9 9.7e+02 1.9 0.0 1 16 155 170 155 177 0.85 6 22 0.9 9.7e+02 1.9 0.0 1 16 189 204 189 211 0.85 7 22 0.9 9.7e+02 1.9 0.0 1 16 223 238 223 245 0.85 8 22 0.42 4.5e+02 3.0 0.0 1 17 257 273 257 279 0.91 9 22 0.42 4.5e+02 3.0 0.0 1 17 291 307 291 313 0.91 10 22 0.42 4.5e+02 3.0 0.0 1 17 325 341 325 347 0.91 11 22 0.42 4.5e+02 3.0 0.0 1 17 359 375 359 381 0.91 12 22 1.6 1.7e+03 1.1 0.0 1 16 393 408 393 415 0.85 13 22 0.42 4.5e+02 3.0 0.0 1 17 466 482 466 488 0.91 14 22 0.42 4.5e+02 3.0 0.0 1 17 500 516 500 522 0.91 15 22 0.42 4.5e+02 3.0 0.0 1 17 534 550 534 556 0.91 16 22 0.42 4.5e+02 3.0 0.0 1 17 568 584 568 590 0.91 17 22 0.42 4.5e+02 3.0 0.0 1 17 602 618 602 624 0.91 18 22 0.42 4.5e+02 3.0 0.0 1 17 636 652 636 658 0.91 19 22 0.42 4.5e+02 3.0 0.0 1 17 670 686 670 692 0.91 20 22 0.42 4.5e+02 3.0 0.0 1 17 704 720 704 726 0.91 21 22 0.42 4.5e+02 3.0 0.0 1 17 738 754 738 760 0.91 22 22 0.42 4.5e+02 3.0 0.0 1 17 772 788 772 794 0.91
Sequence Information
- Coding Sequence
- ATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCCCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCTTGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCTTGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCTTGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCTTGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATATCCAGGTGGGATCCTTGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCTGCAGGAGCTGCACCTAGCGCTGACCAATGTCCAGTTGGCTCTGTCGAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCTCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCCCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCCCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCCCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCGCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCCCTGACCAATGTCCAGGTGGGATCCATGCTGCCGCTGACCCAGGCCCTGCTGAGTCTGCAGGAGCAGAAACCCCCCGTCAGCCCGGAGGAGCTGCACCTAGCCCTGACCAATGTCCAGGTACTACGTCAGCACTCAGCGTGCGCTGTGCCGTGGATGCTACGCTTGGATGAGTGA
- Protein Sequence
- MLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSLLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSLLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSLLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSLLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNIQVGSLLPLTQALLSLQEQKPPVSPAGAAPSADQCPVGSVEVGSMLPLTQALLSLQEQKPLVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVGSMLPLTQALLSLQEQKPPVSPEELHLALTNVQVLRQHSACAVPWMLRLDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00727254;
- 90% Identity
- iTF_00727254;
- 80% Identity
- -