Basic Information

Insect: Fissipunctia ypsillon
Gene Symbol: -
Assembly: GCA_947568875.1
Location: OX387647.1:14213619-14225821[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.5e-06 0.00026 22.1 0.5 1 23 476 498 476 498 0.99

2 8 7.7e-07 8.1e-05 23.7 1.4 1 23 504 526 504 526 0.98

3 8 6.8e-06 0.00072 20.7 0.6 2 23 535 556 535 556 0.98

4 8 7.6e-06 0.0008 20.5 0.7 1 23 562 584 562 584 0.99

5 8 8.1e-08 8.5e-06 26.7 2.1 1 23 590 612 590 612 0.98

6 8 4.8e-07 5.1e-05 24.3 1.3 1 23 618 640 618 640 0.97

7 8 5.9e-05 0.0063 17.7 7.5 1 23 646 668 646 668 0.97

8 8 5.9e-05 0.0063 17.7 0.9 1 22 674 695 674 695 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.5e-06	0.00026	22.1	0.5	1	23	476	498	476	498	0.99
2	8	7.7e-07	8.1e-05	23.7	1.4	1	23	504	526	504	526	0.98
3	8	6.8e-06	0.00072	20.7	0.6	2	23	535	556	535	556	0.98
4	8	7.6e-06	0.0008	20.5	0.7	1	23	562	584	562	584	0.99
5	8	8.1e-08	8.5e-06	26.7	2.1	1	23	590	612	590	612	0.98
6	8	4.8e-07	5.1e-05	24.3	1.3	1	23	618	640	618	640	0.97
7	8	5.9e-05	0.0063	17.7	7.5	1	23	646	668	646	668	0.97
8	8	5.9e-05	0.0063	17.7	0.9	1	22	674	695	674	695	0.95

Sequence Information

Coding Sequence: ATGTGTGAATGGCTATCACACGGGGAGTGGTGCGATGTGAAACTCCTGTGCGGCGGGCGCGCATTCAGCGCACATCGCGCCGTGCTCGCCAGTGTTAGCACTTTTCTCAGACGTCTTCTCCTTTCTTGTCCCATCACAGATGAGTCGCCGACTTTTATCGTTTTGCCAGATTTTGACCTCGACGCTATGTCATCTGTGCTTTATTACATTTATAATGGGGAAGTCATTGTAAAAAAAGAGAAAATTGAAAAGTTTTTAGACATTATAAAAGCCATGCAAATATTTGTCGACTGTCAATATTTGCGGCAAATGTCGGATTCATTGGAGACTATCAATTTCAACTCACGTTTTCACTATGGAACGGATTTGTCAAAAAGGAATATATTTACTTTAGGATTTGAAGGCTGCAGAGATCGACGATACATAAATATAAAGAAAGGCAAGGAAATCCAGGATGTATTACAGTATTCAGTTAGCAACTCAGATTGCAAAGATACACTGGTACGTAGTCAGAATCCAAGTGGAGAGCGTCACTCTTCTTTAGGAAATCTGAAATCACCGTATGGAGACCGACAAAGGAACTCTTTTCTACGTGATTTATTTATCGAGACATATCCTCGAAACGGTAATGTTAACGGTCTGACGGCAGGCGTGCTAGCAATATCAAATGAATGCTATCGTGCTCCGGCATCTGTGCTCTTGACGAATGCAAATGGCAAACATCTCAGCGCCGACGGTTCACTCTTAGAACCATATAAAAAAACGAATGAGCACATCAGTCATTCGCCTACAGTATTTCACCTTCGTAAGCAGCAGCGATGCACTCTAGATGAACCAGATTACGGTAAAACAAAAAAAACATTGTATGACCAATCTTGTCTAAAAGTTTGTTCGGCGGGGAAAAGTAATACGACACATGTTTTTGCCACTGAAACAAATAATTTACCGAAGAATATATTAATGAACCATGTTCCTATGTCGGCTAATCCTTTACTTCAGTTGGGGATACAGGAACAGATTCTGTCAGGATTTTATGTTCCTTCCTTGGACTTTAGTATCGCACCATCAGTGTTTGATTCGATAAAACCGATGCCAGTGCATAGAAATAGATCTGATGAAAGCAGTAAAGAAATAGACGTGGCAACGTCTGCTAAAGTAACTATTTTAAATCATGTATTAGAGAGTCCATGGAGCCCTCGGATACCTAACAACTACAAACCGTTCCGTAGAAAAACTGAACACTTGTTGCAGTCACAATTGTCTAAACAAAAGACAACCGAAAATAGCATAGTAAACGATAGCAATAACAATGTTCCCAAACCTAATCTATCAGCAAATTCGAATGCGGTTAGCGAAGCAGAGCCTGCAGGGGACGTGAAAAAAATCACAACAGTGGCATGTCTACCGAATACTCGGAGAGATGACTTCAAGTGCACTATTTGCAATCAGATGTTCACGAGTGGCGAGTCGCTCGCGGTGCACATGCGGCGGCACTCGGCGACCGCGCGGTACTCGTGCGGAGAGTGCGGCAAGACGTTCTCTCAGCTGCGCAACTTCAAGTACCACATGTCCATACACCGAGGGACCAGGGAGTTCGCAGCCACCTGCACCGTGTGCGGCAAGTACTTCAATGACAGAGGATATCTCAGCAGCCACATGAAGATCCATCGGAACAGGAAAGAGTACAAGTGCACACTCTGCCCCAAGTCTTTCAATCAACGCGTTGCTTACAACATGCATGTGAGGATCCACACAGGTGTGAAGCCTCACGTATGTGAGGAGTGCGGCAAGGCGTTCTCCCGCAAGATGTTGCTGAAGCAGCACCAGCGCACGCATTCGGGCGAGCGCCCGTACGCATGCCCGCACTGCGACAAGCGGTTCGCAGACCGCTCCAACATGACGCTACACTTGCGACTACACACAGGGGTGAAGCCGTTTTCCTGCACAATGTGCCCGAAGTCTTTTACAAAGAAGCATCACTTGAAGTCGCACCTGAACTTCCACACTGGCTCCAAGCCGTACTCGTGTCCTCGCTGCAAGCTGGCCTTCACCCAGTCCTCGAACATGAGGACGCATCTCAAGAAGTGCCGAGCGCCTGAACCAGTCACCAGTGACATTCCTCACGCCGGAGATACGACAGTGCAGCTGCAGACGTAG
Protein Sequence: MCEWLSHGEWCDVKLLCGGRAFSAHRAVLASVSTFLRRLLLSCPITDESPTFIVLPDFDLDAMSSVLYYIYNGEVIVKKEKIEKFLDIIKAMQIFVDCQYLRQMSDSLETINFNSRFHYGTDLSKRNIFTLGFEGCRDRRYINIKKGKEIQDVLQYSVSNSDCKDTLVRSQNPSGERHSSLGNLKSPYGDRQRNSFLRDLFIETYPRNGNVNGLTAGVLAISNECYRAPASVLLTNANGKHLSADGSLLEPYKKTNEHISHSPTVFHLRKQQRCTLDEPDYGKTKKTLYDQSCLKVCSAGKSNTTHVFATETNNLPKNILMNHVPMSANPLLQLGIQEQILSGFYVPSLDFSIAPSVFDSIKPMPVHRNRSDESSKEIDVATSAKVTILNHVLESPWSPRIPNNYKPFRRKTEHLLQSQLSKQKTTENSIVNDSNNNVPKPNLSANSNAVSEAEPAGDVKKITTVACLPNTRRDDFKCTICNQMFTSGESLAVHMRRHSATARYSCGECGKTFSQLRNFKYHMSIHRGTREFAATCTVCGKYFNDRGYLSSHMKIHRNRKEYKCTLCPKSFNQRVAYNMHVRIHTGVKPHVCEECGKAFSRKMLLKQHQRTHSGERPYACPHCDKRFADRSNMTLHLRLHTGVKPFSCTMCPKSFTKKHHLKSHLNFHTGSKPYSCPRCKLAFTQSSNMRTHLKKCRAPEPVTSDIPHAGDTTVQLQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00622996;
90% Identity: iTF_00758480;
80% Identity: iTF_00726612;