Fyps028873.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- -
- Assembly
- GCA_947568875.1
- Location
- OX387645.1:27766339-27767568[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.11 46 5.1 0.0 6 34 47 75 43 77 0.75 2 11 0.1 44 5.1 0.1 6 34 78 106 73 108 0.75 3 11 0.11 46 5.1 0.1 6 34 109 137 105 139 0.75 4 11 0.11 46 5.1 0.1 6 34 140 168 136 170 0.75 5 11 0.31 1.3e+02 3.6 0.1 9 34 174 199 168 201 0.76 6 11 0.26 1.1e+02 3.8 0.1 7 34 208 235 202 237 0.76 7 11 0.1 44 5.1 0.1 6 34 238 266 233 268 0.75 8 11 0.29 1.2e+02 3.7 0.1 8 34 271 297 265 299 0.75 9 11 0.1 44 5.1 0.1 6 34 300 328 295 330 0.75 10 11 0.31 1.3e+02 3.6 0.1 9 34 334 359 328 361 0.76 11 11 0.91 3.8e+02 2.1 0.0 8 23 364 377 358 382 0.71
Sequence Information
- Coding Sequence
- ATGAAGTACTATTCAAATAATATTAGTCGCAATTTTATTAACGTACCTTCAACTTTTCGAAATTTGTGTTTGACCGACTCTGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCTGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACACCGCTCTGTGCGACGTCACGCTCGCGGCTGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCTGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCTGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCTGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCTGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCTGACCGCTCTGTGCGACGTCACGCTCGCGGCAGACCGCTCTGTGCGACGTCACGCTCGCGGCTGA
- Protein Sequence
- MKYYSNNISRNFINVPSTFRNLCLTDSDRSVRRHARGRPLCATSRSRQTALCDVTLAADRSVRRHARGRPLCATSRSRQTALCDVTLAADRSVRRHARGRPLCATSRSRQTALCDVTLAADRSVRRHARGRPLCATSRSRQTALCDVTLAADRSVRRHARGRPLCATSRSRLTALCDVTLAADRSVRRHARGRPLCATSRSRQTALCDTALCDVTLAADRSVRRHARGRPLCATSRSRQTALCDVTLAADRSVRRHARGRPLCATSRSRLTALCDVTLAADRSVRRHARGRPLCATSRSRQTALCDVTLAADRSVRRHARGRPLCATSRSRLTALCDVTLAADRSVRRHARGRPLCATSRSRLTALCDVTLAADRSVRRHARG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -