Fyps026501.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- Jrkl
- Assembly
- GCA_947568875.1
- Location
- OX387656.1:16970299-16971195[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-08 1.7e-05 25.3 0.0 14 38 27 51 20 57 0.85
Sequence Information
- Coding Sequence
- atgccaagaaatcgtaaaaagaccaccgctaaagCGGCTTGGACCGAACAAGATCTTCATTGTGCTAAAACTGCGATTGAAGGAGGTTTGTCTAAAAGAAAAGCCGCAAGACAATTTAACATACCATTTACATCTTTAAGATATCGACTGAAAAATGACAACATAAGCAACCCAAGGCTAGGTCGCAAGCCTGTTTTCACCCGACAGCAAGAAATTGAAATTGCTGAACAAGTTAAGTTGCTGGGTTCGCTATATTACGGACTCAATGTCACAGATTTGCGCAAACTGGTTTACAAATATGCTGAGCTAAATAATATAAAAAATAATTTTGATCAAAACAGCAAGACAGCTGGAATAGATTGGGTACACGCCTTTATGAAACGCAATCCTTCAGTTTCTATACGCAAAGCTGAAGCAACCGGCTTAAATAGAATTTCTGCTTTCAACAAAGAAGAAATAACACATTTCTATGATAAACTTGGCGACTTAATGGAAAAACAAAAGTTTATACCCAACAACATTTACAATGCTGACGAAACTGGTATCACTACGGTGACAGATCCAGGAAAAGTGCTCGCTGAAAAAGGACAAAGAAGAGTCGGGTCTGTTACAAGTGGCGAACGAGGAAGCAACATAACAGTTATGTGCATGATGAGCGCAGCCGGAAACTTCATACCACCCATGTTTATTTTTGCCAGACAGAGAATGACGCCTTTATTAGAAAAAGATGGATCAGCTGGTGCATTATATACCAACTCTAAGAATGGCTGGATAAACGAAGAGTTATTTGTCACTTGGCTCAAACATTTCAAAGCATTTGCTAAGCCTACCCTAAGAATCACCTGTGTTATTAGTCCTAGACAATCACAACAGCCACATTTCCCTAGATGCTTTTAA
- Protein Sequence
- MPRNRKKTTAKAAWTEQDLHCAKTAIEGGLSKRKAARQFNIPFTSLRYRLKNDNISNPRLGRKPVFTRQQEIEIAEQVKLLGSLYYGLNVTDLRKLVYKYAELNNIKNNFDQNSKTAGIDWVHAFMKRNPSVSIRKAEATGLNRISAFNKEEITHFYDKLGDLMEKQKFIPNNIYNADETGITTVTDPGKVLAEKGQRRVGSVTSGERGSNITVMCMMSAAGNFIPPMFIFARQRMTPLLEKDGSAGALYTNSKNGWINEELFVTWLKHFKAFAKPTLRITCVISPRQSQQPHFPRCF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01516506;
- 90% Identity
- iTF_00122308;
- 80% Identity
- -