Fyps029139.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Fissipunctia ypsillon
Gene Symbol
-
Assembly
GCA_947568875.1
Location
OX387668.1:5342695-5345412[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-08 3.8e-06 27.3 0.0 2 40 15 53 14 57 0.92

Sequence Information

Coding Sequence
ATGTCTACGAAAAAACCCAAAAAAAAAACTGTGACTTACACTGCTGAAACTCTACAGAAGGCATTAAAAGAAATTCGCGAAGAACAAATCCCAATCAGAGAAGCATCACGTAAATTTAGTATTCCGAGATGTACAATTCAAGATCGATTAAGTGGCAGAAGGACGGACGAACTAAAAAAACATGGCCCCGAGCCAGTGCTGGGAGAACAAGGCGAGAAAAAAGTTGTAGATTGGCTTATAAATATAGCCAAATGTGGTTTTCCCGTAAAGAAGCAAGAGCTATTAGATACCGTTCAAAAAATTTTCAAAGATTTAAAAAAGCCGAATCCTTTTAAGGATGATCGTCCTGGTCAGACATGGTATCTAAACTTTTTAAAACGACATCCTGAGATATCAGTAAGATCAGCAGAAGGGATCAACAAGGCTCGCGCTAGAGTgaccgaagaatcgattcgactgtggttccgcgaactggaaatgtttttagcgcaagaagggcacttggatatacttgcagaacccgaaaggatgttcaatggcgatgaaagtggtttttcactttgcccaaaaacaggaaaagttcttgggccaaaaggttatcgaaatctctaccaaattaaagtcggcaacgaaaaagataacctaacagtactcgcaacattcaacgctactggtgaaatgtgcccgccattggtggtttttccgtatattagaccaccaaaaagtttaacagacaacatgcctcaacactggagtctaggaagaagcgaatccgggtggatgaatggagatgtattcttcgaatacatcactaatgatttcaataattggataacagaaaataatatcaagaagcccattcttctactagtcgatggacataagtcacatatgtctttaatgttgagctctgtctgtgaagagcttggaattattttatatgctcttcccccgaacactacgcacatgttgcagcctgccgatgtcagcgtgtttgctccattaaaagcccagtggaaGAGTCACATCAGAAAATTCCTTGCAAAGCCGGAAAATTTGAACAAAGCTGTAACAAAAACAAATTTTTGTCATCTTTTTAAAGACATTATCGAAAATCCACAAATGAAAATCAATATCGTTAATGGATTCAGGCGATGTGGTCTTTTTCCGTTTGATCCGAACGCAGTCGACTATACGAAATGTGTCCAAAACACATTGGAACAATTTAGTCGAGCGAATCGTTCGCGTGAGAACTCGGGAATAACGAATGAAGACCTCATCGCTACCCGCAAAGTGATTCGACATTTGAGACCAGTCCTAAAAGAGAAGAAAATTGACACAAAATTGATCCTAAAGGAAATAAAAAAGCTTAGAAGGTCAGAACCCAGAGAACCTCAATATATTACTGGATCCGAAGACAATACAAACTCAACACTCGACGTGTCGAGCATTCATCTTTTGTCAAATTTTTCGGCTCATTCATCTGCGAATGCTTCTAATCTCGCCCCACCGCACGTTTCCGATCCAAACCCGCCGCATGTTTCTGATGTTACGTCTGCAAATGTTACCGATGTCGCTCCGTCGCATATACATGATCCTGCCCCACTGACTCTTGTTATTGCGGGTGAAGTTCCCAAACGTACCGCTGAGAGTTTTCCAAAACATGGCTTGTCGAATTTAGTTACATCTGATTTTAGCGGCCTTGAGTTGGGAACAGTGGTTTCTCTGGACGATATTGTGGTCATACCGTTCCAAACCAGCACACCCAAAAACCGAAACCTAAGCCCCAAATGTCTAGCTCCTATTGAAATCTCTCCATCTTCAAAACCGGACTCGAATAACGTCCCTCTATGCATGGAACAGATACAGCAAATCCAGATTACAGATGAACCTGAAAGTTTGGAAACTTGCACCGAAGTAGTTCCACATAGTAGACCCAAAGAGCAATTGGGATCTGAAAATCGTGACACCGAGTCAGTAACATTATCTCAAGTGCCAACTTTAAAAGACAACTTGCCATTATGTACCGTTACTACCACAGAAAAATCGGAAGACGAAAATGAAATTTTGACATTTGGCGTAACTCCCCAGCAACTAGAAGGAAGGTCTCTTTTATCACTGGATGACGTTACAGTTATTCCAACTATATCAGAACATTCAGATTCTCATGACGTTCTGTCAAAGAAATCATCATCTTCCACAATTACATCCGCATCCACCAACAATAAAAAATCAATAGATCCAAACACAGTATTCGAGCAACATCTGTTTATACCCCAACCTCTAGAAAAGTCCAAACAAAACATACCCAAAGCTCGTATTCCGTCGGCGATATCAGGGAAGAAATGGCGAGAATACCATCTACTAAAAGAAAAAGCTAAACAAGAAAATAATGAGAAGAAAGAAAAAGCTAAAGAAGCTAGAAAGCAAGCCGTGAAGCGTAAGCAAGAGGAAACAAAGAAAAAAAAAGAAATACACAAAGCCAAGAAACTTAATAAAGGAAAACTTTTAAAGACTACAGAGTTAACATCAAAACAAAATTGTGGCCAATGCGCAAATATCTTAAACAGTGACACTGAGGACGATGAAAACAAAAATGTTGGCTGTGATTTTTGTACTAAATGGTTTCATTTGAAGTGCACTGATTTTATAGGACTGACATACGATGATGTTAAAGATAAACCATTCAAGTGTAACACGTGCATTATTGATCCTTAG
Protein Sequence
MSTKKPKKKTVTYTAETLQKALKEIREEQIPIREASRKFSIPRCTIQDRLSGRRTDELKKHGPEPVLGEQGEKKVVDWLINIAKCGFPVKKQELLDTVQKIFKDLKKPNPFKDDRPGQTWYLNFLKRHPEISVRSAEGINKARARVTEESIRLWFRELEMFLAQEGHLDILAEPERMFNGDESGFSLCPKTGKVLGPKGYRNLYQIKVGNEKDNLTVLATFNATGEMCPPLVVFPYIRPPKSLTDNMPQHWSLGRSESGWMNGDVFFEYITNDFNNWITENNIKKPILLLVDGHKSHMSLMLSSVCEELGIILYALPPNTTHMLQPADVSVFAPLKAQWKSHIRKFLAKPENLNKAVTKTNFCHLFKDIIENPQMKINIVNGFRRCGLFPFDPNAVDYTKCVQNTLEQFSRANRSRENSGITNEDLIATRKVIRHLRPVLKEKKIDTKLILKEIKKLRRSEPREPQYITGSEDNTNSTLDVSSIHLLSNFSAHSSANASNLAPPHVSDPNPPHVSDVTSANVTDVAPSHIHDPAPLTLVIAGEVPKRTAESFPKHGLSNLVTSDFSGLELGTVVSLDDIVVIPFQTSTPKNRNLSPKCLAPIEISPSSKPDSNNVPLCMEQIQQIQITDEPESLETCTEVVPHSRPKEQLGSENRDTESVTLSQVPTLKDNLPLCTVTTTEKSEDENEILTFGVTPQQLEGRSLLSLDDVTVIPTISEHSDSHDVLSKKSSSSTITSASTNNKKSIDPNTVFEQHLFIPQPLEKSKQNIPKARIPSAISGKKWREYHLLKEKAKQENNEKKEKAKEARKQAVKRKQEETKKKKEIHKAKKLNKGKLLKTTELTSKQNCGQCANILNSDTEDDENKNVGCDFCTKWFHLKCTDFIGLTYDDVKDKPFKCNTCIIDP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00445076;
90% Identity
iTF_00726270; iTF_00447079; iTF_01208106; iTF_01209192; iTF_01208108; iTF_01208107; iTF_01166574; iTF_01166573; iTF_01064593; iTF_00300114; iTF_00300116; iTF_00445076; iTF_00373927; iTF_00636320; iTF_00636321;
80% Identity
-