Basic Information

Insect: Fissipunctia ypsillon
Gene Symbol: -
Assembly: GCA_947568875.1
Location: OX387650.1:2884764-2886542[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-11 5e-09 36.6 0.0 3 38 17 53 15 57 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-11	5e-09	36.6	0.0	3	38	17	53	15	57	0.92

Sequence Information

Coding Sequence: ATGCCGCGTAATTATAAAAGAACTTCTTCTAGACAAGAATGGGATTCGGATAACATGAAAAAAGCCGTTCAAGCCGTATTTGATGGCACCatgggttacttgaaagctgccaaaacttttgaggtaccgaaatcaactttacaagaTCGAGTAAACCGATTTAGACAGAATAATGATCTAGACTGTTCCACACGCAAAGGCTTGGGACGATTTAAACCGATTTTTTCGACTTCCCAAGAACAAAGTCTAGTTGAGCATGTGTTGATCATGGAAAAACGATTATTTGGTCTCACGTACAAAGATCTTCGACGCTTAGCGTATCAGCTCGCAGAAGCAAACAATATTAACCATTGTTTTAATAAGGTACATAAATTAGCGGGAGAAGATTGGTTAGCTGGGTTCATGAAGCGACACCCACAATTATCACTGCGTGCTGCCGAGCCGACGTCGGTGGCAAGAGCGATGGGGTTTAACATGGTCAGTGTCAACAAATTTTTTGATTTGCTAGAGGAAGTTATAGATCACTATAAATTTCAGCCTACAAAGATTTATAATGTGGATGAAACGGGCCTGACAACGGTGCCAAAAAGACAAAGCAGAATAATCGCTTTAAAAGGAAGAAAACAGGTCGGACTGGCTAGTTCAGCGGAAAGAGGCCAGCTGACTACTGCTGTCCTGTGTGTGTCTGCTTCTGGAAATTATATTCCTCCGTTGCTAATATTTCCACGAGTTCGGATGAAGGCTGAACTTCTAGATGGTGCTCCACCAGGGACAGTTTCGGTTTGCCATCCAAGTGGCTGGATACAAAGTGATATTTTCGTTGAGTGGTTGAATCACTTCATATCAACAGTAAAGCCCAAAAAAGAAGATCCTGTTCTTCTTTTACTCGATGGACACTCGACCCACACAAAAAATCTCGCACTAATCGAAAAAGCTAGGGACAATGGAGTAGTAATTTTAAGTTTTCCCCCTCATTGCACCCACAGACTTCAACCGCTAGACGTGAGTATCATGGGTCCATTGAGCACATATTACACCCAAGAAGTAAACGCATGGTTACGGAATAATCCGGGTAGAGTAGTGACACAATTCCAGCTGGCAAGACTTTTTGGAGCAGCGTACTGTAAAGCGGCTACTATACAGAACGCCGTTTCTGGCTTTACCAAAACAGGCATATTCCCGACGAACAGGACAGTATTCGGTGAAGCAGATTTTGCTGCGGCTGAGACAACAGAAATACCTTCTACAACACCATCAACTTTCGCTGATGCATATATGAACCCGACACCATCAACTTCTTTAGCGCCACTCGTTCACTCAACGCCATCAGTTTCTGCACTCAATATTGATCCGATGCCATCAACTAGCACTGCACCGCCAGTTCCTGTTACGATGAATCAAAATTGTGTAACGGTGTCACCAGCGGATATAATGCCAGTTCCTAAAATGAGCGTGGACCGAAAAAGAGCAACCAATCACCGAAGAGGAAAAACTGCGGTTATCACTTCCTCCCCCTATAAAAATGAGTTGATAACCATCTCACAAAACAAAATTCCTAAGCTTAATCTGAACCAACCATCTAAGACCAAAAAACCGAAACAAAAAATAATAAATGATAACATTTGCTTGTACTGCCTCGAAGAATATGGTTCAAGCCGCGTGGATGAAGGTTGGGTGCAATGTACAGAGTGTAAAGGTTGGGCTCATGAAGGCTGTACAGGTTATGACTCGGATGATTTATATAATTTTGTATGTATGGGATGCGTTGCTTCTAGATAA
Protein Sequence: MPRNYKRTSSRQEWDSDNMKKAVQAVFDGTMGYLKAAKTFEVPKSTLQDRVNRFRQNNDLDCSTRKGLGRFKPIFSTSQEQSLVEHVLIMEKRLFGLTYKDLRRLAYQLAEANNINHCFNKVHKLAGEDWLAGFMKRHPQLSLRAAEPTSVARAMGFNMVSVNKFFDLLEEVIDHYKFQPTKIYNVDETGLTTVPKRQSRIIALKGRKQVGLASSAERGQLTTAVLCVSASGNYIPPLLIFPRVRMKAELLDGAPPGTVSVCHPSGWIQSDIFVEWLNHFISTVKPKKEDPVLLLLDGHSTHTKNLALIEKARDNGVVILSFPPHCTHRLQPLDVSIMGPLSTYYTQEVNAWLRNNPGRVVTQFQLARLFGAAYCKAATIQNAVSGFTKTGIFPTNRTVFGEADFAAAETTEIPSTTPSTFADAYMNPTPSTSLAPLVHSTPSVSALNIDPMPSTSTAPPVPVTMNQNCVTVSPADIMPVPKMSVDRKRATNHRRGKTAVITSSPYKNELITISQNKIPKLNLNQPSKTKKPKQKIINDNICLYCLEEYGSSRVDEGWVQCTECKGWAHEGCTGYDSDDLYNFVCMGCVASR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01440931;
90% Identity: iTF_01230456;
80% Identity: iTF_00726228;