Fyps009456.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- retn
- Assembly
- GCA_947568875.1
- Location
- OX387659.1:15191741-15196965[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-20 2.9e-16 60.5 0.0 16 89 6 77 1 77 0.93 2 2 8.3 3e+04 -3.7 0.0 26 38 224 236 211 241 0.75
Sequence Information
- Coding Sequence
- ATGTTCTTATTACCAATAGGCACTCCTATCAACCGGCTACCGATAATGGCAAAGTCAGTGTTAGACCTGTATGAGCTGTACAACCTGGTGATAGCTCGCGGCGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCGTCGTCCATCACGTCTGCTGCCTTTACGTTACGCACACAATACATGAAATACCTGTATGACTACGAGTGCGAAAAGAAGAACCTTTCAACCAGGAGCGAGCTAGACGCAGCCATCGAAGGGAACAAGCGTGAGGGTCGCCGCGCATCCGGACAGTACGACGCACAAGCTGCTTTAGCTATGATAGTCAACCCAGTGGTGCCCTCATCATCACCTAACGTCCCCGTCTTCTTGCAGCCCCCATTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCACTATCGCTGTCGCTGGCGGGTGTCGCGCCGCGGCTGCCGCCGCTGCCGCCGCACGCGTCGCATCTCGCACAGCACGACCTCGAGTGCAGGGTGCGCGAGTATATGAAGTTATTACAGCAGCCGAGGGGCATTATGAGAAATGGCTCCGAATCACCCCCCAGCAATGGCCCAGCATCAATAATGTCACCTCGTGACGCAGCCGCCCTCAATGCCATCGACGTCTCTCGTCTCACTCTCTGGTCACTCTACAACAATAACAACAACAACAGCCCACAACCGGACCTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAATTCTGTGACGAGCGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCACCGCCTGCCAAGCGCCGCACGCCGCGCCCCACGTCGCGCCCCTGCTCGCGCCCAGAGTCGCCGCGCGCCGAGCTGCACGAGCCGCCGCAGCTGCGCCACGGCCGCAGGGACGCCCCGTCGCCGCCGCAGATCAACGGTATGCCCAATTCCAATGGTGTCAATGGTGCTGCCTTCAAGATTCTTACCAGAGGAGACGCGAGCACAGGTGATCAGCAACTGGTAGTGTCAATAGAGCTGAACGGAGTAACTTATGAAGGAGTACTCTTTCCCTCTGGTAACGGTCAAAATGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MFLLPIGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMIVNPVVPSSSPNVPVFLQPPLNRVPASLAQLSQHMQPLSLSLAGVAPRLPPLPPHASHLAQHDLECRVREYMKLLQQPRGIMRNGSESPPSNGPASIMSPRDAAALNAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSVTSGGKREACRSPAPPAKRRTPRPTSRPCSRPESPRAELHEPPQLRHGRRDAPSPPQINGMPNSNGVNGAAFKILTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- -
- 80% Identity
- -