Basic Information

Insect: Ferrisia virgata
Gene Symbol: L
Assembly: GCA_900060175.1
Location: FIZR01009839.1:16721-31903[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.014 1.3 9.8 5.5 1 23 10 32 10 32 0.98

2 24 4.5e-06 0.00041 20.8 2.6 1 23 38 60 38 60 0.99

3 24 9.7e-05 0.0088 16.6 0.2 1 23 66 88 66 88 0.98

4 24 6.3e-06 0.00057 20.3 1.5 2 23 105 126 104 126 0.97

5 24 0.53 48 4.8 0.1 2 23 149 172 148 172 0.88

6 24 0.00041 0.037 14.6 0.8 1 23 217 240 217 240 0.95

7 24 0.0015 0.13 12.9 0.5 1 23 353 375 353 375 0.95

8 24 0.00095 0.086 13.5 0.9 1 23 399 421 399 421 0.98

9 24 2.2e-05 0.002 18.6 0.5 1 23 429 452 429 452 0.96

10 24 0.0063 0.57 10.9 0.2 1 23 457 480 457 480 0.95

11 24 5.7 5.1e+02 1.6 0.8 1 23 487 513 487 513 0.77

12 24 0.012 1.1 10.0 0.8 2 23 533 554 532 554 0.97

13 24 0.0038 0.35 11.6 1.4 1 23 558 581 558 581 0.97

14 24 0.86 78 4.2 1.1 3 23 711 733 710 733 0.91

15 24 0.00011 0.0099 16.4 2.9 2 23 746 767 745 767 0.96

16 24 0.45 41 5.1 0.4 1 23 777 799 777 799 0.95

17 24 1 92 3.9 2.5 2 23 807 828 806 828 0.96

18 24 8.9 8e+02 1.0 0.4 3 23 852 872 850 872 0.93

19 24 0.0076 0.69 10.6 0.2 1 23 912 935 912 935 0.96

20 24 0.01 0.93 10.2 1.1 1 23 939 961 939 961 0.97

21 24 0.19 17 6.3 0.1 1 23 970 992 970 992 0.95

22 24 0.0018 0.16 12.6 0.3 1 23 1000 1022 1000 1022 0.97

23 24 0.45 41 5.1 4.6 1 23 1029 1051 1029 1051 0.94

24 24 0.021 1.9 9.2 3.0 1 23 1103 1126 1103 1126 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.014	1.3	9.8	5.5	1	23	10	32	10	32	0.98
2	24	4.5e-06	0.00041	20.8	2.6	1	23	38	60	38	60	0.99
3	24	9.7e-05	0.0088	16.6	0.2	1	23	66	88	66	88	0.98
4	24	6.3e-06	0.00057	20.3	1.5	2	23	105	126	104	126	0.97
5	24	0.53	48	4.8	0.1	2	23	149	172	148	172	0.88
6	24	0.00041	0.037	14.6	0.8	1	23	217	240	217	240	0.95
7	24	0.0015	0.13	12.9	0.5	1	23	353	375	353	375	0.95
8	24	0.00095	0.086	13.5	0.9	1	23	399	421	399	421	0.98
9	24	2.2e-05	0.002	18.6	0.5	1	23	429	452	429	452	0.96
10	24	0.0063	0.57	10.9	0.2	1	23	457	480	457	480	0.95
11	24	5.7	5.1e+02	1.6	0.8	1	23	487	513	487	513	0.77
12	24	0.012	1.1	10.0	0.8	2	23	533	554	532	554	0.97
13	24	0.0038	0.35	11.6	1.4	1	23	558	581	558	581	0.97
14	24	0.86	78	4.2	1.1	3	23	711	733	710	733	0.91
15	24	0.00011	0.0099	16.4	2.9	2	23	746	767	745	767	0.96
16	24	0.45	41	5.1	0.4	1	23	777	799	777	799	0.95
17	24	1	92	3.9	2.5	2	23	807	828	806	828	0.96
18	24	8.9	8e+02	1.0	0.4	3	23	852	872	850	872	0.93
19	24	0.0076	0.69	10.6	0.2	1	23	912	935	912	935	0.96
20	24	0.01	0.93	10.2	1.1	1	23	939	961	939	961	0.97
21	24	0.19	17	6.3	0.1	1	23	970	992	970	992	0.95
22	24	0.0018	0.16	12.6	0.3	1	23	1000	1022	1000	1022	0.97
23	24	0.45	41	5.1	4.6	1	23	1029	1051	1029	1051	0.94
24	24	0.021	1.9	9.2	3.0	1	23	1103	1126	1103	1126	0.97

Sequence Information

Coding Sequence: ATGCGGACCCATACGGATTGTATGCCTTTTCAATGTCAATATTGTAATACGTTATTTAAACATAAACGTAGTAGAGATCGtcacataaaaatacatactgGAGAAAAGAAGTATAAATGTTCGAAATGTGATGCTGGATATACCAGGAGcgatcatttaaaaatccatttgaaaacACACGACAATCGAAAACCATTCCAATGTACTCTGTGCAATCGAGGCTATGGTACGGCGGCAGCCCTCACATCTCATATGCAAAATCACAAACgatcgaatgaaatttcaccTCAACCAACACCAGCAGGCAGCATCAAATGTCACAAATGTTCGGAAACGTTTCGAGAACCGGAAGAGTTACAGAATCACATGAATATGCATCAGTCACCTGAAAATGTACATAATTCCAATAACAAATCGTCCAAAAACTCGTATCCAGCCATTTTAGTATGTCCTTACTGTCGTAAAGATAACTTTTCAACGATGGAAGCACTCCAATCGCATGTACAGTCAGCTCATAaatCTATTTTCAACGGAGATTTACAACGCGAgatctcaaatttgaaattaaaatctccGGCTCCGACGCCAACGCAACTAAATTCATCTTCGCCTTTAAACGTAACGCAGTCTTTCAATTCATTACCGTCCTACTATTGCGATCAAtgtacgatgaaattttcatcgttgcaAGCTCTGCAAAAACATACTAACGCCGTACACGGATTCTCTAACAACACCTACAATAACCTGAAGTATTTGATGTCATCACCGGAGATGTACAATAACGGAAAATTGTACTGCATGTATTGCGCGATGCAATTTTTAACGCCGGCAGCTTACGCCGAGCATTATATAATATTCCATAGTCCTTATCATCCTCAATTGATGGGACTAACGCCACCGGAGCAAATGAAACCGACTGACTTATCGAAGAAAACTTCCCCTGTAAAACGTTCCAATATCGACGAACATCGATCATCTCCACGTAAGAAGAATAAAGTTAATGAAAACTCTATTATAAATTCTAATAACAATCGTTACGGTTATCCGGGCCCATTTTTGTGTAATCAATGTAGCGCTGCTTTTACCGATTTCGAATCGTTCCGGGCTCATATTAAATTACATATTGAGGAAACTAGCGGAGGATTATTGGGTGGCGCTTCTCCAATGGAACGTAAACGTACTTCAGCCGAATTCACGTGCCCTCATTGTCGATCGGTGTTCTCATCTAATGAAGAAATCAGCCAACACATCGTGACGCATTTTTTATCCTCCAGTGTAGAATATAGCtgtgaaaattgtcaaaaatcgtaCGAAAAAAGCGACGATTTACAAAAACATCTGATGGAAGTTCACGCTCATCATTTGTACAGCTGCTCAATGTGTAACGAAGTTTTCGAATCGAAAGTGGCCATACAGcttcatttcaaTATCAGACACAATAATGAAGCTAAAGTTTATCGTTGTACTGGATGCTCAACATCCAGTCTTGCGTTTCACTCTGAGCTGGAATTTGCCAATCATGTGAAAACAATGCATACCAATAACTCGCCGTTGTTGACTGCGTTCGCAACTCATCatAATACTCAGATGCAAAGATGCTTCATATGCCACATGAGTTTTCCTACCGAATTGGAAATGCAATTACATTTAGCCACTCATGGTAAACAGTTCCAATGTACGTTGTGTCCTCAATCTTTCCACATTGAGTATTTACTGGACAAACATATGCAAAATGATCATAGTTCACCGcAAATCAACGGATCGTTCGAAAATTGTTTGGATGCCAGAAACAAAGAATCGCCACCAATTCTTTCACCTAATAATCGATTCGACAATCAgataaaaaagaatgaaaattccgAAACAAAGAGCAACTTCATCTGCTGtgatatttgtgaaaaatgcgAATTTACTAGTGAAAATGAACTAATgaatcatagaaaattattccatCATAAACTCATGTCACCTGTAAAACAcgaaaactctgaaaattcTGAAGACCGAATGAAATTACCTCAGAAACATAAATCCAActcgtcttcgtcgtcttcTCCTAcgattagaaatgaaaataaaaagatggaGTCTTTTAATGGCGATTCGAATGGAAATAATTCTGCGTGTTGcgaaatatgtgaaaaacgCGATTTTTCGAGCGAAGCTGAACTAATgtctcataaaaaattgatccacaATGTTAAATTGTCTCCACATGGAAAGGTGAGCTTGAATTGCGCATattgtaaagaaaattgcaaatcGAGATCAGACCTGGAAAATCATATGAAAACGcattctcaaaattcaacttcgtcGGGTAAACATaaatgtataatctgtgatgAAATGTGTCCAACGGCCGCCGTATTAGCCGAACATAAACTTACTCACTGCAAAGTCCTATCGGGAAAAACATGTATGCATTGTAAAGGCTCTATTACAACCGAAGAGCAATTCTTTTCCCATATCCAACAACATAGCTCACCTCAAAATGGAACAAATAATAGCAACAGCTCATCTCAGAGTTCGCTAGTTTTACCAACATTTTGCGTCATTTGTCGACAAACTTTGTCATCCGAAATGGAAGCTCGAATGCATGCCAGATTCCACTTGCATCAATCAGCTGATTTAGTACCGTGTTCTGTATGCTTCCATATGTCTGAAAGGCAGGACTTGATTGCTGGAATATGTAAAGAATGTTATCAAAGACATGGAAAATCGTCTCCTTTTCGATGTCCCGAATGTCATATGAAATTCGATAATGGTACCGCGATTGAAATACACTTGGCAACGGTGCACAGAAAAAGTTACCAGTGTATGAAATGCCAAGTCAGTTtcgataatgaaaaagaaatccaACACCATGTGGCCTCTCATGTAATGATCGACGGGTTAAATGGGCACGAATGTCGTTTATGTCGATTAGTATTACCTTCGCCGTTACAATTACAGGCTCATCTTATTGAGCATACATTCGCTGGTTGCGCTACGTTTACGTGCTATTTATGTAGCTCGGTGTTTACTACTGCTCAAGGCTTACAAACGCATATTTTAGAGCATGGTTTAGCAGCTAGACCATACGATTGTTCGagatgtaaacaaaaattcttctttACTTCCGAATTAGAACATCATAGCTTCATACATTTGGAAGAATTAGCTCTAAGCGAAGGTCACGGATACTTCTACGGTCAGGATAAGAATTTACTTAAAGATAAATCTGCTAACATTCCGTTCATTAATCATTCCATTTCAATGGCTGAAAACCTATACAACAATAATAAAGAACCGAGCAATAAATATCACTGTACTGAATGCGGGTCAGATTTTCCTCACGCCAATGATCTGTACGAacataaaaatcgttttcacAATACTCAAAATGAAAGATACGTGCAAAATGGAGAACATAAACGTAAAAGAGATACTCCAAACCCTGCAGACGCCAATAGGGTAAAGTATGAAGAGCAAAATGACACTGTTGAAGTAGATGAAAAAACTGACGTTAAGCAGAACAATGATTGTGAATCAGAAGACGAACAAATTGATGTGGTTACTACTAAGACTGAGGAGCAAGCggaaaatgtggaaaataaTGACAAATAA
Protein Sequence: MRTHTDCMPFQCQYCNTLFKHKRSRDRHIKIHTGEKKYKCSKCDAGYTRSDHLKIHLKTHDNRKPFQCTLCNRGYGTAAALTSHMQNHKRSNEISPQPTPAGSIKCHKCSETFREPEELQNHMNMHQSPENVHNSNNKSSKNSYPAILVCPYCRKDNFSTMEALQSHVQSAHKSIFNGDLQREISNLKLKSPAPTPTQLNSSSPLNVTQSFNSLPSYYCDQCTMKFSSLQALQKHTNAVHGFSNNTYNNLKYLMSSPEMYNNGKLYCMYCAMQFLTPAAYAEHYIIFHSPYHPQLMGLTPPEQMKPTDLSKKTSPVKRSNIDEHRSSPRKKNKVNENSIINSNNNRYGYPGPFLCNQCSAAFTDFESFRAHIKLHIEETSGGLLGGASPMERKRTSAEFTCPHCRSVFSSNEEISQHIVTHFLSSSVEYSCENCQKSYEKSDDLQKHLMEVHAHHLYSCSMCNEVFESKVAIQLHFNIRHNNEAKVYRCTGCSTSSLAFHSELEFANHVKTMHTNNSPLLTAFATHHNTQMQRCFICHMSFPTELEMQLHLATHGKQFQCTLCPQSFHIEYLLDKHMQNDHSSPQINGSFENCLDARNKESPPILSPNNRFDNQIKKNENSETKSNFICCDICEKCEFTSENELMNHRKLFHHKLMSPVKHENSENSEDRMKLPQKHKSNSSSSSSPTIRNENKKMESFNGDSNGNNSACCEICEKRDFSSEAELMSHKKLIHNVKLSPHGKVSLNCAYCKENCKSRSDLENHMKTHSQNSTSSGKHKCIICDEMCPTAAVLAEHKLTHCKVLSGKTCMHCKGSITTEEQFFSHIQQHSSPQNGTNNSNSSSQSSLVLPTFCVICRQTLSSEMEARMHARFHLHQSADLVPCSVCFHMSERQDLIAGICKECYQRHGKSSPFRCPECHMKFDNGTAIEIHLATVHRKSYQCMKCQVSFDNEKEIQHHVASHVMIDGLNGHECRLCRLVLPSPLQLQAHLIEHTFAGCATFTCYLCSSVFTTAQGLQTHILEHGLAARPYDCSRCKQKFFFTSELEHHSFIHLEELALSEGHGYFYGQDKNLLKDKSANIPFINHSISMAENLYNNNKEPSNKYHCTECGSDFPHANDLYEHKNRFHNTQNERYVQNGEHKRKRDTPNPADANRVKYEEQNDTVEVDEKTDVKQNNDCESEDEQIDVVTTKTEEQAENVENNDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01150697;
90% Identity: iTF_01150697;
80% Identity: -