Basic Information

Insect: Falcaria lacertinaria
Gene Symbol: -
Assembly: GCA_951449985.1
Location: OX602138.1:1827652-1829439[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.013 0.92 10.4 1.6 1 23 19 41 19 41 0.93

2 15 0.2 14 6.7 0.0 2 23 69 91 68 91 0.87

3 15 0.015 1.1 10.3 1.1 2 23 112 134 111 134 0.95

4 15 0.46 33 5.6 2.6 1 23 139 162 139 162 0.92

5 15 0.00023 0.016 16.0 0.6 1 23 167 190 167 190 0.97

6 15 0.0021 0.15 13.0 0.6 2 23 193 215 193 215 0.94

7 15 0.06 4.2 8.4 0.6 2 21 222 241 221 242 0.93

8 15 0.009 0.63 11.0 4.0 1 23 301 324 301 324 0.94

9 15 0.00021 0.015 16.1 0.2 2 23 397 419 396 419 0.96

10 15 1e-05 0.00073 20.2 0.6 3 23 426 447 425 447 0.93

11 15 0.00047 0.033 15.0 3.3 2 23 452 474 451 474 0.94

12 15 0.003 0.21 12.4 3.7 1 23 479 502 479 502 0.97

13 15 2.9e-06 0.00021 21.9 5.0 1 23 506 529 506 529 0.98

14 15 0.00041 0.029 15.2 1.1 2 23 536 557 535 557 0.96

15 15 2.5e-06 0.00018 22.1 0.6 1 23 563 585 563 585 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.013	0.92	10.4	1.6	1	23	19	41	19	41	0.93
2	15	0.2	14	6.7	0.0	2	23	69	91	68	91	0.87
3	15	0.015	1.1	10.3	1.1	2	23	112	134	111	134	0.95
4	15	0.46	33	5.6	2.6	1	23	139	162	139	162	0.92
5	15	0.00023	0.016	16.0	0.6	1	23	167	190	167	190	0.97
6	15	0.0021	0.15	13.0	0.6	2	23	193	215	193	215	0.94
7	15	0.06	4.2	8.4	0.6	2	21	222	241	221	242	0.93
8	15	0.009	0.63	11.0	4.0	1	23	301	324	301	324	0.94
9	15	0.00021	0.015	16.1	0.2	2	23	397	419	396	419	0.96
10	15	1e-05	0.00073	20.2	0.6	3	23	426	447	425	447	0.93
11	15	0.00047	0.033	15.0	3.3	2	23	452	474	451	474	0.94
12	15	0.003	0.21	12.4	3.7	1	23	479	502	479	502	0.97
13	15	2.9e-06	0.00021	21.9	5.0	1	23	506	529	506	529	0.98
14	15	0.00041	0.029	15.2	1.1	2	23	536	557	535	557	0.96
15	15	2.5e-06	0.00018	22.1	0.6	1	23	563	585	563	585	0.98

Sequence Information

Coding Sequence: ATGAAAATACTGTTCAACCACACGACTGTGATGCCGTTCAAATGGCGTGGCAGGTTTCTTTGCTTCTACTGTACTAAAAGCTACACTGAATACCCAGAGTTCAGGAAACACACGCTGGCCCACGGTCTTTGCACCACAAAGGATTACGCCCTGAAAGCTATCAAGGGAAATcacattgaaattaagattGACGTCTCAGAGATAGTCTGCGACATTTGCAATGAATCTTTTGATTGGTTCTCAGATATTATTGATCACTTGAACGTGGTGCATGGTTTGGGGTACGATAAAGATGTGGACATACCGTTCCAAGAATACAGACTGGCTGATGGTAAATGCTTATTGTGTGAAGAGAAGTTTACTTACTTTGGCCATTTGGTGACCCATGTCAACAATACGCATCCTCAAAACAGCTTTATTTGTGACGAGTGTGCATTGTCGTTTAATAAGAAACGGGATCTGGCCTGCCATTTCAGGAACTACCATCGCCAAGGTGGCTACCCATGCGATCAATGCGTACAGActtttgaaactaaaataaacttaagcACGCACAGGAATAAAGTGCATTTTAGAGAATGCAGTAACTGTGATATGAGATTTGGATCTCTGACACTCCTACAGAAACACACGCAGCTCGATCACCCCGAGGTATGCGAGTTGAAATGCAgttattgtttgaaaatctTTCACACTGCCCAAGGAGTAAAGCTGCACATGAGCAGGTGTAAAGTGAGGATGATAGCGCATGCGCATATGCCGGCAATAAACGCCCTCCCGGAAGACAGAATAATGGTACCGGTCGTGCCGAAAAAGAACCAGAACATCATACAAATAAGACTTAATATACAATGTGTGTTAAACATGTCGACTGCGGTGCCTTTTAAATTTTTCGCCAAGTTCAGCTGCTTCTACTGTTCAAAAAAGTTTATAGAATTTGACGAACTAAAACACCATACATCTCAAGAGCATCCTATCTGTGAGTTGAAGTCTAAAGCTTTGAGGACGTGCAAAGGGGAAAGAATATCCGTGAAAATTGACGTTTCGTCTTTGTCTTGTAAGCTGTGCTGCCTTCCCATGGCCGATTTAGACACACTAGTAGACCATATCATTGCGGAACACAAAGCTAATTACAACAAGGCTGTAAAGGGATGTCTAGAACCGTTTAGGATTTTGAAAGACAATATCCCGTGTCCCATATGTGAGGAACGTTTTAGGTATTTCACAACCTTattgaaacatttaaattCAGTCCACAACGACAATAATAGGATATGCGATTTTTGCGGACGTAGTTTTAGAAACGTGTCCAATCTTAAAGCCCATCTAACGTATTCGCATACAGGAGTTTGCGAGTGCAATATTTGCGGGTTGAAGTTCAAGAATCTAGCCTGTCTAGCTCGGCACAGGGCTAGGACTCACGATGCGAAAGATTTCAAATGCCCCAAATGTTCAGAGAGGTTCCAAAGCGAATATCACAAGCAGAAGCATTTGATTAGAGAACACGATATTGGACATAAGTGCTCTTATTGCGGCAAAATGTTCACGAGAAACTCGTTTATGAAAGATCACATTAGGAGAACGCATTTGAAAGAGAAAAATGTACCGTGTTCCGTCTGCAATGAGAAGTTTTTCGATAATCACTTGCTAAGGATGCATATGGTCAAACATGATGGGGAAAGAAAGTTTACCTGCACGGTTTGCGGTAAGGCCTTCTTGAGGAGAAGTAACCTGAGCTCGCATATGGAAATGCACAAGAAGTATGGCCAACTTCAGGTGCCCATTTag
Protein Sequence: MKILFNHTTVMPFKWRGRFLCFYCTKSYTEYPEFRKHTLAHGLCTTKDYALKAIKGNHIEIKIDVSEIVCDICNESFDWFSDIIDHLNVVHGLGYDKDVDIPFQEYRLADGKCLLCEEKFTYFGHLVTHVNNTHPQNSFICDECALSFNKKRDLACHFRNYHRQGGYPCDQCVQTFETKINLSTHRNKVHFRECSNCDMRFGSLTLLQKHTQLDHPEVCELKCSYCLKIFHTAQGVKLHMSRCKVRMIAHAHMPAINALPEDRIMVPVVPKKNQNIIQIRLNIQCVLNMSTAVPFKFFAKFSCFYCSKKFIEFDELKHHTSQEHPICELKSKALRTCKGERISVKIDVSSLSCKLCCLPMADLDTLVDHIIAEHKANYNKAVKGCLEPFRILKDNIPCPICEERFRYFTTLLKHLNSVHNDNNRICDFCGRSFRNVSNLKAHLTYSHTGVCECNICGLKFKNLACLARHRARTHDAKDFKCPKCSERFQSEYHKQKHLIREHDIGHKCSYCGKMFTRNSFMKDHIRRTHLKEKNVPCSVCNEKFFDNHLLRMHMVKHDGERKFTCTVCGKAFLRRSNLSSHMEMHKKYGQLQVPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00467595;
90% Identity: -
80% Identity: -