Basic Information

Insect: Drepana arcuata
Gene Symbol: -
Assembly: GCA_016069955.1
Location: JACCPG010000009.1:65996-67780[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.014 1.2 10.1 0.6 1 23 19 41 19 41 0.93

2 16 1.2 1e+02 4.1 0.0 3 20 70 87 68 91 0.76

3 16 0.0048 0.41 11.6 1.0 2 23 112 134 111 134 0.96

4 16 0.12 10 7.2 1.2 1 23 139 162 139 162 0.95

5 16 0.00037 0.032 15.1 0.2 1 23 167 190 167 190 0.96

6 16 9.3e-05 0.0079 17.0 0.2 2 23 193 215 193 215 0.95

7 16 0.11 9.5 7.3 1.1 2 21 222 241 221 242 0.93

8 16 0.00059 0.05 14.5 2.3 1 23 301 324 301 324 0.96

9 16 3 2.6e+02 2.8 0.0 2 20 352 370 351 371 0.91

10 16 0.0077 0.66 11.0 0.2 2 23 397 419 396 419 0.95

11 16 2.9e-06 0.00025 21.7 0.7 3 23 426 447 425 447 0.95

12 16 0.001 0.089 13.7 3.7 2 23 452 474 451 474 0.94

13 16 0.014 1.2 10.2 2.1 1 23 479 502 479 502 0.96

14 16 3e-05 0.0026 18.5 5.7 1 23 506 529 506 529 0.97

15 16 0.00057 0.049 14.5 1.8 2 23 536 557 535 557 0.96

16 16 4e-06 0.00034 21.3 1.1 1 23 563 585 563 585 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.014	1.2	10.1	0.6	1	23	19	41	19	41	0.93
2	16	1.2	1e+02	4.1	0.0	3	20	70	87	68	91	0.76
3	16	0.0048	0.41	11.6	1.0	2	23	112	134	111	134	0.96
4	16	0.12	10	7.2	1.2	1	23	139	162	139	162	0.95
5	16	0.00037	0.032	15.1	0.2	1	23	167	190	167	190	0.96
6	16	9.3e-05	0.0079	17.0	0.2	2	23	193	215	193	215	0.95
7	16	0.11	9.5	7.3	1.1	2	21	222	241	221	242	0.93
8	16	0.00059	0.05	14.5	2.3	1	23	301	324	301	324	0.96
9	16	3	2.6e+02	2.8	0.0	2	20	352	370	351	371	0.91
10	16	0.0077	0.66	11.0	0.2	2	23	397	419	396	419	0.95
11	16	2.9e-06	0.00025	21.7	0.7	3	23	426	447	425	447	0.95
12	16	0.001	0.089	13.7	3.7	2	23	452	474	451	474	0.94
13	16	0.014	1.2	10.2	2.1	1	23	479	502	479	502	0.96
14	16	3e-05	0.0026	18.5	5.7	1	23	506	529	506	529	0.97
15	16	0.00057	0.049	14.5	1.8	2	23	536	557	535	557	0.96
16	16	4e-06	0.00034	21.3	1.1	1	23	563	585	563	585	0.98

Sequence Information

Coding Sequence: ATGAAAATACTGTTCAACCATACCACAGTGATGCCGTTCAAATGGCGCGGCAGATTCTTGTGCTTTTACTGTACTGAGAGCTATGTCGATTACCCTGAGTTCAGGAAGCACACGCTCGCACACGGCCTCTGCACTACGAAGGATTATGCCCTAAAAGTTATTAAGGGAAACCATATTGAAATTAAAATCGACGTCTCTGAAATTGCATGTGATATCTGCAATGAGGCGTTTGAACAATTTCCGGTTGTGATTGATCATTTGATAGGAAAACACGGTCTGGAATACGATAAGGATGTAGACATACCGTTCCAAGAGTATAGGCTCGTCGACGGCAAGTGTTTACTGTGTGAAGAGAGGTTTACCTATTTTGGCCATTTGGTGAATCATGTGAATAGCACACATCCCCAAAATAAGTTTATTTGTGACGAGTGTGCGCTCCCGTTCAACAAGAAACGTGACCTGGCCTGCCATTTGAGGAACTACCACCGCCAGGGTGGTTACCCTTGCGATCAGTGCGTGCAGGTTTTTGAGACAAAGCTCAGCTTGCGAACTCACATTAATAATGCACATTTCAGACAGTGCAGTAACTGTGGTCTTAGATTTGGTACTCCAGCTCTCCTGCAGAAACATGTTCGGTTCGATCATCCCGAAGTCTGTGAGCTGAAATGCAGTTACTGTATGAAGGTGTTTCATAGTTCACAAGGCGTTAAATTGCACATGAGCAAATGCAAAGTTAAAATGCTCTCGGAAGTAGATCTGCCAGTTGACAACTCTTTTCCTGAAGAAACCATCATCGTTCCAACAGTTAACAAGAAGAACCAAAATATTATACAAGTAAGAATCAATATTCATTGCGTTTTAAACTTATCAACAGCGGTGCCTTTTAAATTCATGGCCAAGTTTAGCTGCTTCTACTGCTCAAAAAAGTTTATAGAATTCGATGAGCTCAAACGACACACGTCGTCGGAACACCCTGTGTGCGATCTGAAATCCAAAGCGCTAAAGAATTGCAAAGGTGAAAGGATCAGCGTGAAAATTGATATTTCATCTCTATCCTGTAAAATTTGCCGCACGCCAATGGACGATTTGGACACTCTCATAGACCACATAATATGCGAGCATGAAGCGAACTACGACAAGACGGTTAAAGGTTGTTTAGAACCATTTAGAATTCTCAAAGACAACATTCCGTGTCCTCTATGCTTGGAGCAGTTTAGATATTTTACAACCCTATTGAAGCATTTAAACTCTGAACACAACAACAATAATAGGATTTGTGATTTTTGCGGACGCAGTTTTAAAAATGTTTCCAACCTCAAGGTACATATGTCGTACAATCACACTGGCGTATGTGAGTGTAACATTTGCGGCCTGAAGTATAAGAACCAATGGTGTCTGGCTCGGCACAGAGCGAAGACGCACGACGCCAAGGACTTCAAGTGCCCGAAATGCTCCGAACGATTCCAGAGTGAATACCGCAAACAAAAGCATTTGATCAAAGTCCACGACATTGGTCACAAGTGCAGTTATTGCGGCAAAATGTTCACGAGGAACTCGTTTAAGAAAGATCATATACGGCGGACGCATTTGAAGGAGAAAAATGTAACTTGCTCCATCTGCAGTGAGAAGTTTTTCGATAATCACTTGTTGAGAATGCACATGGTGAAACACAAAGGCGAGAGGAAATACAACTGCTCAGTGTGTGGCAAGGCGTTCTTGAGGAGTAGCAACCTTAGTGCTCATATGCATATGCACAAGAAGTATGGACAGCTCCAGACGAGTTAG
Protein Sequence: MKILFNHTTVMPFKWRGRFLCFYCTESYVDYPEFRKHTLAHGLCTTKDYALKVIKGNHIEIKIDVSEIACDICNEAFEQFPVVIDHLIGKHGLEYDKDVDIPFQEYRLVDGKCLLCEERFTYFGHLVNHVNSTHPQNKFICDECALPFNKKRDLACHLRNYHRQGGYPCDQCVQVFETKLSLRTHINNAHFRQCSNCGLRFGTPALLQKHVRFDHPEVCELKCSYCMKVFHSSQGVKLHMSKCKVKMLSEVDLPVDNSFPEETIIVPTVNKKNQNIIQVRINIHCVLNLSTAVPFKFMAKFSCFYCSKKFIEFDELKRHTSSEHPVCDLKSKALKNCKGERISVKIDISSLSCKICRTPMDDLDTLIDHIICEHEANYDKTVKGCLEPFRILKDNIPCPLCLEQFRYFTTLLKHLNSEHNNNNRICDFCGRSFKNVSNLKVHMSYNHTGVCECNICGLKYKNQWCLARHRAKTHDAKDFKCPKCSERFQSEYRKQKHLIKVHDIGHKCSYCGKMFTRNSFKKDHIRRTHLKEKNVTCSICSEKFFDNHLLRMHMVKHKGERKYNCSVCGKAFLRSSNLSAHMHMHKKYGQLQTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00724143;
90% Identity: -
80% Identity: -