Flac002853.1
Basic Information
- Insect
- Falcaria lacertinaria
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_951449985.1
- Location
- OX602111.1:1249893-1265416[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-64 4.5e-60 203.8 11.0 1 221 125 354 125 357 0.91 2 3 4e-09 9.2e-05 22.2 1.2 222 267 380 425 377 445 0.74 3 3 1 2.3e+04 -5.6 16.4 1 49 446 493 446 520 0.73
Sequence Information
- Coding Sequence
- ATGGGTCAAAGATCTGAGGAAGCCACGCCTGATAACAGTGATGAGGAGAGCGGAGATGCTTTCACTGATGGTGATTTTGGGGATTCCGAAGAAGAAATTATCGTAGAGAATAACGATACTCAAACCTCCCATATTCCAATTAACGAAACTGTTAACGAAGAAGTATCAAACATAAATGGTTCTCTGCAAGACATAGAACAAGTCAACGGCTCAGAGAACCATATCAAAGTTAATGGACGTATAAATGGTGAAAATGGTCATGGTTTTAGTGAAGTTGATAATCGTATTGAAACCTTAACGGAACTGAGGAGGGATTCCCACGGTGAACAGAATCCGTCAATAGTTGGAATTCTCGGTGACCAACAGAACCACGCGGAGCAGCGTCTAGCGGCGCGGAGAGCGGCGCGGGCGGAGGCACGCGAGATACGCATGCGCGAGCTCGAGCGGCAGCAGCGCGAACAAGAAGACCATGCTGATAAGGCGTATGACATGTATGCAGAGACGGTGGGGCGGCGCGGTGGCACGCGGCTGGCGGCGCTCAGCCCCGCCGTGGTGCATTCGCCGCGGCGGAGCTCTGAGGACTCCGCCGACGACACCTTCAGCATCAAGGACCTCAGGCACGAGGTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCCGCGCTCGGCTACCAGCTCGAGCTGCTCAAGGACCGCATCGAGGAGCTGCACGAGGAGTACGCGCAGCTACAGCGCGAGCACCGCGAGAAGTGTTCGGCGCACGAGCGTCTGCGGCGCGAGCACGTGTCTCTGGAGCGCGAGGTGGGGCTGGCGCGGGCGGCCGTGCGCGCGCGGGACGCGGCCGCACACAACGCGGGCTTCGCCTTCGTCGACGCCGCCCCCGCCACCTCCGCCTCCGCCTCCACCGCCCCCGCCACATCCGCCtccgccgcccccgcccccgcctccTCCGCCCCCGACGCTCCCCTCCTCGCGCTCGTCTCGCACAACTCCGAGCAGCTGCTCAACGACGCCGGCGAGGGGACACTCGcttttgcccacggTTTCGCACGCGTGTCTACTTGCATTGGCCATGAGATAATAAACATAACATGGATGTGGGCAAATGTCCGGTTGCAAAAGCTGTTGGGCTCGAAGCAGTCGCTGGAGTCTGAAGTGCGCAAGTTGAAGCTGCAGCTGAACGAAGAACGCGCCGCCCGGCAGAACGGCGTCGCCAACCACCACGACCACGAGTACGAGTCCGAGATGGAGGCGCTGCGCAAGGCGGCGGCGGAGGCGAAggggcgcgcggcgcgggcggagGCGGAGGCGGCGCTGGGCGCGGCGGCCGCGGCGCGCCTCGAGGCGCAGCTCGCCCGCCTGCGCGCGCGCCAGGACCACCAGGACGAACACGAGGAACACCTCAAGCAGGAGAGGCGCAAGCTGCAGCGAGAGGCGAGAGAGGCGCTCAACCGAGTCGAAGAATTGGAGACAGAAAACAGTCATTTGACGAAACGCCTCGACAAACTGAAGAACGCCAAGTCAGCGCTACTAAAGGACCTGTGA
- Protein Sequence
- MGQRSEEATPDNSDEESGDAFTDGDFGDSEEEIIVENNDTQTSHIPINETVNEEVSNINGSLQDIEQVNGSENHIKVNGRINGENGHGFSEVDNRIETLTELRRDSHGEQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAALSPAVVHSPRRSSEDSADDTFSIKDLRHEVKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSAHERLRREHVSLEREVGLARAAVRARDAAAHNAGFAFVDAAPATSASASTAPATSASAAPAPASSAPDAPLLALVSHNSEQLLNDAGEGTLAFAHGFARVSTCIGHEIINITWMWANVRLQKLLGSKQSLESEVRKLKLQLNEERAARQNGVANHHDHEYESEMEALRKAAAEAKGRAARAEAEAALGAAAAARLEAQLARLRARQDHQDEHEEHLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -