Flac014999.1
Basic Information
- Insect
- Falcaria lacertinaria
- Gene Symbol
- -
- Assembly
- GCA_951449985.1
- Location
- OX602128.1:6833279-6839713[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.9e-11 1.6e-07 31.2 0.0 1 37 10 48 10 56 0.87
Sequence Information
- Coding Sequence
- ATGCCAAAAAcacctaaattaaaatacacacaGGAAAACCTCGAAAAAGCTATTGCTGAAGTACAGAACAATGAACAGCAATTGTCAGATCGCCAAATAGCTCAGAAATATGGTGTTCCGAGATCAACTCTTAGGTTTCATAAACATAACCCAGGCCACAAGACTAGCCTGGGTCCATCGCCTATCTTAACCCCAAATGAAGAAGCTCTTCTTGAAGACTGGATTATAACTTCAGCTAGAAAAGGTTTTCCAAAgaataaggaaaatattttagatagcGTACAAAAGTTTCTTGAGGACAATCCACGTCCTAAtccatttacaaataataggCCTGGTATAGGGTGGTGGAAGGCTTTTTTAAAAAGACACCCTAAATTAAGTATAAGAACATCGGAAGGAGTCACTAAAGCTAGCTCGTGCGTGTCTGAAAGAGATATAAGGGGATGGTTTGATGAAATTCGTGCATACGCTGAAGAAAAAGGATTGATTGATGTTCTCAGTCAACCCAGTAGGATTTTTAATGCGGACGAAACAAATTTTCAGATTTGCTTGAGTTCGGGACTTGTAATAGCTGAAAAAGggtccaaaaatatttataacattgaaCACTCTAATGCAAAAGAGTCTATAACTGCTCTATTCACTTTTTCGGCTGCTGGTGACATATGCTGCCCATTTATTGTGTATCCTTATCAAAGACTACCTGAAAAGATATGCGAGTCTTTACCAGAGGGGTGGGGTATAGGAAAATCGGACAATGGTTGGATGACTACCGAAATATTTTACGAATTTATAGCCAATGTTTTTCATCCATATTTAGTGAGCAAATCTGTCGAGTTCCCAATCATCTTATATGTTGACGGTCATAAAACTCACTTAAATTATCATTTGAGCCAGTTATGCACCCATCTTCAAATTGAGTTGATAGCTTTGTACCCCAATGCAACCAGAATAATTCAACCAGCTGATGTTTCTGCATTTAGACCGTTGAAAGTGGGCtggagaaaatatttaaaaaaatggcaaCTATCAAATGATAACAAGGGAATAACTAAGCTAAATTTTGCTCCTGTACTCAATGAAGTTCTTGAATTAAGTCTGAGGCCAGAAATATTGATCAATGGTTTTAAAGCTTGTGGTCTGTGCCCATTCAATCCTGATTCGATTAATTATTCTAAATGCTTAGGCAAAAATACTAGTCAGAGAGAAATATCAAAGGAAATTTCGGATACAGCAACAATTACTTTTGAGACATTCAGAAATGTAATAGGAGTTTCCCTTTGCAAGAGATTTCAAGAGGAATCATTATCGACAATAGAACCACACTTGGCCATCATTTATAACCTTTGGAAAGAATTCCAATCAAAGACTCAAAACGTTGCGGACGAAATTGATACATCCTGTAAACAGTTAGGAAACCCGAATTTAACATCTTCTATGTCTCCTAATATTACTGATAATACAGCTATACCAACTACTGATTTAAGCGCAGATAGTTGTAATCGGATTGAAGTATTACACGAAGAACAAGTTGTACACCAAGTTGAAGTCCctccaacaaaaataaattgtctcCCTGGAACATCTAAAACTGACCAATCTAGCTATTACCTACATAGTCTCCCTGGAACATCCAAATCTGGTCCAAATATCTGCATCTTGTACGATCACTCACAAAATCAATCTAGTCAGTCTGAATCAGTAACCCCTACCACCCAAACAGTTCTTGAGAGTCCGAAGTTGCTCAAAATAAAGTCCTTGTTTGGAGAATATTTAGCATATCCAAAAACACCTATAAGAAAAGGGAAGCGTCAAATTGAAAGACAACCATTCGCTATTACATCagacaaatttaaattggcATTACAAAAAAAGCAATTAGAGAAGGAAAATCAACTGaaagaaaaggaaaaaaagaaaatggaGCGAGAGGCGAAGAAGACTGAGAACAGTAAAAAAGAACAAAGCAAggAGCGCGGCAGCGGCGGCACACGCGCACGCGGGCGCAGTCGCCCCACGAGCTCATCTCCGAACACGACCCGCAGAACACACCGCCGCACCGTCTGTAGCGACAAACACCACCTTCGTACAGACACTCCTTGGTGTCGGCGGCGCGCGAGCCAGAAGTGGTTGCTGCAGTACTGgcagcgcggcgcggcgctgtCGGGCAGCCACTCCACGCCGCGCGCCTCCTCGCCCACCTCCACCTCGGACGCGCTGCTGCcgccgctgctgctgctgccGCTCACGCTGCACGCCGCGCTGCCCGCTGCCTTCTGCGGACACACCACGTCACTGCGTGCCCGGCTCACCACAACTAATGTAGGGTACTGCTACCTAGGGGAGCGAGAGGTCGGTTGGAGGCGGTGA
- Protein Sequence
- MPKTPKLKYTQENLEKAIAEVQNNEQQLSDRQIAQKYGVPRSTLRFHKHNPGHKTSLGPSPILTPNEEALLEDWIITSARKGFPKNKENILDSVQKFLEDNPRPNPFTNNRPGIGWWKAFLKRHPKLSIRTSEGVTKASSCVSERDIRGWFDEIRAYAEEKGLIDVLSQPSRIFNADETNFQICLSSGLVIAEKGSKNIYNIEHSNAKESITALFTFSAAGDICCPFIVYPYQRLPEKICESLPEGWGIGKSDNGWMTTEIFYEFIANVFHPYLVSKSVEFPIILYVDGHKTHLNYHLSQLCTHLQIELIALYPNATRIIQPADVSAFRPLKVGWRKYLKKWQLSNDNKGITKLNFAPVLNEVLELSLRPEILINGFKACGLCPFNPDSINYSKCLGKNTSQREISKEISDTATITFETFRNVIGVSLCKRFQEESLSTIEPHLAIIYNLWKEFQSKTQNVADEIDTSCKQLGNPNLTSSMSPNITDNTAIPTTDLSADSCNRIEVLHEEQVVHQVEVPPTKINCLPGTSKTDQSSYYLHSLPGTSKSGPNICILYDHSQNQSSQSESVTPTTQTVLESPKLLKIKSLFGEYLAYPKTPIRKGKRQIERQPFAITSDKFKLALQKKQLEKENQLKEKEKKKMEREAKKTENSKKEQSKERGSGGTRARGRSRPTSSSPNTTRRTHRRTVCSDKHHLRTDTPWCRRRASQKWLLQYWQRGAALSGSHSTPRASSPTSTSDALLPPLLLLPLTLHAALPAAFCGHTTSLRARLTTTNVGYCYLGEREVGWRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00000253;
- 90% Identity
- iTF_00723902;
- 80% Identity
- iTF_00723902;