Basic Information

Insect: Fabriciana adippe
Gene Symbol: -
Assembly: GCA_905404265.1
Location: FR989988.1:7618574-7626109[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00056 0.051 14.6 0.3 1 23 145 167 145 167 0.97

2 16 0.00044 0.04 14.9 0.4 3 23 175 195 174 195 0.97

3 16 0.0021 0.19 12.8 1.4 3 23 204 225 203 225 0.97

4 16 0.11 10 7.3 4.9 2 23 234 256 233 256 0.93

5 16 0.03 2.7 9.2 2.7 1 23 261 283 261 283 0.95

6 16 0.16 14 6.9 0.1 3 23 335 355 333 355 0.95

7 16 0.00058 0.053 14.5 2.0 2 23 362 383 362 383 0.96

8 16 0.0033 0.3 12.1 5.5 3 23 391 412 390 412 0.97

9 16 0.0089 0.81 10.8 0.6 3 20 422 439 421 443 0.93

10 16 0.0016 0.14 13.2 6.9 1 23 448 470 448 470 0.96

11 16 0.041 3.8 8.7 3.1 1 23 476 499 476 499 0.93

12 16 0.023 2.1 9.5 0.9 2 20 505 523 504 525 0.91

13 16 2e-06 0.00018 22.3 1.0 2 23 530 551 529 551 0.95

14 16 0.0032 0.29 12.2 0.3 1 23 557 579 557 579 0.98

15 16 9.5e-05 0.0087 17.0 1.4 2 23 586 607 586 607 0.98

16 16 8.1e-08 7.4e-06 26.7 0.4 1 23 613 635 613 635 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00056	0.051	14.6	0.3	1	23	145	167	145	167	0.97
2	16	0.00044	0.04	14.9	0.4	3	23	175	195	174	195	0.97
3	16	0.0021	0.19	12.8	1.4	3	23	204	225	203	225	0.97
4	16	0.11	10	7.3	4.9	2	23	234	256	233	256	0.93
5	16	0.03	2.7	9.2	2.7	1	23	261	283	261	283	0.95
6	16	0.16	14	6.9	0.1	3	23	335	355	333	355	0.95
7	16	0.00058	0.053	14.5	2.0	2	23	362	383	362	383	0.96
8	16	0.0033	0.3	12.1	5.5	3	23	391	412	390	412	0.97
9	16	0.0089	0.81	10.8	0.6	3	20	422	439	421	443	0.93
10	16	0.0016	0.14	13.2	6.9	1	23	448	470	448	470	0.96
11	16	0.041	3.8	8.7	3.1	1	23	476	499	476	499	0.93
12	16	0.023	2.1	9.5	0.9	2	20	505	523	504	525	0.91
13	16	2e-06	0.00018	22.3	1.0	2	23	530	551	529	551	0.95
14	16	0.0032	0.29	12.2	0.3	1	23	557	579	557	579	0.98
15	16	9.5e-05	0.0087	17.0	1.4	2	23	586	607	586	607	0.98
16	16	8.1e-08	7.4e-06	26.7	0.4	1	23	613	635	613	635	0.99

Sequence Information

Coding Sequence: ATGATCCAATGTAGAGCATGTCTTAAAACAGAAGAAAATCTTAAAATGTATCCATTTAATGAAAAAATCATTGTATACTTTAATTTGCTCACTGATATAAACGTAAAACTTAATGATAGTATGCCACAACAAATATGTAAATGCTGTCTTGATATGGTTAATTTGTTTATAGAATTTAGAGATAAATGTATTTGGTCGAATTCTGTTTTATTTGACAACAACATTCAGAATATTAAAGAGGAGAATAAAGAAAGCAATGAAACTGCTAATGACAGTATTAAACAAGAGAAAAGTGAATTTAATTACAGTGATGGTGTTCGTAGTGATGTTGACGATAACTTCATATATGAGTTAGAGTTTTATGAAAAACAATTTGAAGGAGCAAATAATGATAAATTGGGAGGCAAATGCAAAAAAAAATTGTTGAAAAGCTTTTCTTGCGGTCTCTGTAATAAAGAATTCAAAGAAAGAAATTCATTAGTAGAACATTTAGATATTCATAAAATTAATGGTGACAATATTTGTGACTTGTGTAAGCAAAATTTCTCTGACTGGCAGGAATTATTTTCACATAGATTAATACACTTGTCCAAGAAAAATGACAAAATTTGTCATATATGTTTTACAAAGTTTGTATCTCCTGCATTTTTAGAGTATCATTATAGAAAGCAACATTTGAATGAGGAGAATCCCATTCTACGCTGCTGTTCATGTAAACAAAGTTACACCACTCCTCAGGAGTTACAAGAGCATAAAGCGAGATGTCATGCAGAAGACTCATTCATTTGCAATTGCTGTTCAAAAATATTTGCAACCGAAAAACAACTTAGGCTGCATGTAACTAAACATATAGACAGGAAGACTGTGGAAGATGTTATTGAAAACTCCAGCAAAAATATTGGTAATTTAGAAACAAAACATAAAGCATCTAATGAACAGAAGGAAAAAGACTTATTTGCAAAAAAAAGGAAAAATTTTAAAAAATTGGAAACTAGATTATTTTGCGGGCTTTGTGAAAATATATATGAAAGTTCAGATTCTTTATTTGAACACTTGGATAGTCATAAGAATAACAATGATAACAGCTGCCACGTGTGTGCGCAAACATTCACAGACTGGACACAGTTGTTTTCGCACAGATTACAACATTTACCTACGAAACAAAAAGCATGCCATATTTGCTTCAAAGGATTCCGATCACATGTATATTTGGAACACCATTACAAAAAAATTCATTGCAACAATGAAAAGGCGACGGTTGACTGTTTGACCTGCAATAAAAGCTACAACACACCCATTAAATTACGAAAACATGTGTGGAGAAGTCATTCTAATAAAACCTTTATATGTGATTTTTGTTCAAAAATATATTGTCACAAAGATCAACTGAGAAGGCATATACATGGACACATGGGCCGCGAGTCGCATGCGTGTGACCAATGCGATTACTCTACTAAATATATAACAAATCTAAAGGAACACAAAACAAGGAAGCACACGCCGAAAAGAGTATATTGCAAAGTGTGCTCTAGAGTATTTAGTGACCAACTCAAGCTCGACGCCCATAAGTGTAACACACGATCGTTAATTTGCTCCACATGCGGGAAAACGTTTAAAGGAAACAAACAGCTCACGCGGCACATGGTGTCGCACGAGAGCGCGGGGCGCTTCCAGTGCGCGCGCTGCCCGGCGCGCTACCGCTCGCGCACGGCGCTGCTCGCGCACCGCGACCGCCACGACGGCGTGCGCGCGCGCCGCTGCCCGCACTGCCCCGCCGCCTTCTACTCGTACTCCGTGCTCACCAAGCACAAGCGCACACACACAGGAATAAAACCATATGTTTGCAAAATTTGTCAAAAGGCATTCACTGGAAACAATAATTTAAAAGTCCACATGAGGATCCATGGAGAATATTTAATCACGAAGAAAGTAACAAATAAATAA
Protein Sequence: MIQCRACLKTEENLKMYPFNEKIIVYFNLLTDINVKLNDSMPQQICKCCLDMVNLFIEFRDKCIWSNSVLFDNNIQNIKEENKESNETANDSIKQEKSEFNYSDGVRSDVDDNFIYELEFYEKQFEGANNDKLGGKCKKKLLKSFSCGLCNKEFKERNSLVEHLDIHKINGDNICDLCKQNFSDWQELFSHRLIHLSKKNDKICHICFTKFVSPAFLEYHYRKQHLNEENPILRCCSCKQSYTTPQELQEHKARCHAEDSFICNCCSKIFATEKQLRLHVTKHIDRKTVEDVIENSSKNIGNLETKHKASNEQKEKDLFAKKRKNFKKLETRLFCGLCENIYESSDSLFEHLDSHKNNNDNSCHVCAQTFTDWTQLFSHRLQHLPTKQKACHICFKGFRSHVYLEHHYKKIHCNNEKATVDCLTCNKSYNTPIKLRKHVWRSHSNKTFICDFCSKIYCHKDQLRRHIHGHMGRESHACDQCDYSTKYITNLKEHKTRKHTPKRVYCKVCSRVFSDQLKLDAHKCNTRSLICSTCGKTFKGNKQLTRHMVSHESAGRFQCARCPARYRSRTALLAHRDRHDGVRARRCPHCPAAFYSYSVLTKHKRTHTGIKPYVCKICQKAFTGNNNLKVHMRIHGEYLITKKVTNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247420;
90% Identity: -
80% Identity: -