Fadi020225.1
Basic Information
- Insect
- Fabriciana adippe
- Gene Symbol
- -
- Assembly
- GCA_905404265.1
- Location
- FR990001.1:8159848-8161914[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-11 6.5e-09 35.9 0.1 1 38 9 46 9 50 0.95
Sequence Information
- Coding Sequence
- ATGCCTCCCAAACGGGCATTGTGGTCAGAAGACGATCTGATCGCAGCTGTTAGAGCAGTACAAAGAGGAATTTTGAGTACGTATAAGGCTGCAGAGAGATATAAGGTTCCTAGAAGAACAATCAGAAATCATCTGCAGTCTGGCAGTTTAAATAAAAGTTTGGGACGTAAACCTATATTAAATGATGAAGAGGAAGCTCAACTTGTGCAAAGGATAATCCGGTATTCTGAAATGGGCTTGCCTGTGACACCAAGAATATTGCGTCGATTGGTGTATAAATATTGTGAGCAAAATAATATAAAACACAATTTTAATGATGAGGGCAAATGCGCAGGCAAAGACTGGTTCAAAGCGTTCATGAAAAGACACCATGAAATATCCGTAAGAAAAGCGCAATTCATGAACCCAGCTAGAGCCCAAAAGCTAAATAAATTTATTGTTGATGACCATTTTAAAAAACTGAGAGATATCTACGATAAATTTGACTTATATAATCATCCCGAGAAAATTTATAATATGGATGAGAAAGGATGCCGTCTCACTATCCACCACCAGCAAAGTGTTTTGGCTAATAAAGGGGCTAAAAGGGTTCATTTGCAGTCTTCTGAACATGCTGAAAGCGTTACCATTGCAGGATGTGTTAATGCTCTTGGCACAGCCATACCACCTATGGTCATATTTAAAGGAAAACGTTTGAAACCAGAATTGTACGATAATTTGCCTCAAGGATCTTTAGTAGAAAAATCAGCAAAGGGATATATGACCAATGAACTTTTCAAAATATTTTTAAAACACTTGTCTAGATACAAAAGCCAGGGACCATGCCTTTTGATATTTGATGGAGCAGCATGTCATTTAGATCTTTCCATAGTTGATATATCCGATTCACTTGGCATTAATTTGTACTGCCTACCTTCAAACACAACCCATGAGTTACAGCCCCTCGACAAAGCCGTATATCGATCATTCGAGCACCACTGGGATGCAGAATTGTTATCATTTTTGGATCAAAACAGAGACAAAAAACTCACTAAAGCACGCTTTAATATCATTCTTTCAAGCGTTTGGTCTAAATGTATGACACACAGCAATATCACGAGTGGCTTTAAAGCGACTGGCTTGTATCCCTTCAACCCACAGGCCATACCAGAAACAGCTTTTGCCCCTTCCATATTAACGGAAGCTCCTGCACCAGATGGTGCACAAGAAAACGCACAAGCTTTCGAACATCGTCATGCACAAGTTTCAGAATCCGGAGATACAACACCGTCAATTTTATCGGAAGCCCCAACGCCTGATCGTGATCAAGAAAATATACCACCTATTAATAGTGATCAACAGAAGAGTTCAGAATCTGCTGCTAGTTCACCATCAATTTTGAAACAGATTCCAATACCAGATGTCTTGCTTGGAAATATTTCACCTGTTGATTATCTTCGACTAGCGACTCCAGAACAAACTAAGCAATCACCAGCTATAGCATCAACATCCACAGGTCAGGTCTCAAGAGAATCAATCGTGCAACGCATCTATTATCGCACAGTTTATGGAACAAGCTCTAGTTCAGATGAATCTGATGATTTACCACTCAGTCGGTTGAAAAGAAATGATTTTTATGATCTTCTGCCTACACCTGTTAAAGTTCAAACATGCACACCGACTGTTAGACGAAAAGCCATTAATTATCGAGGTACTCCAGTCACAAAAGATCTATTTAATAAATATAATCAAGATAAAATAAATAGTAAAAAAGTGAAAGTTAACAAAAGAAAGAAAAATAAACAAGACGAAAACTTTACTGATGTTAAAACAGGTAGAAAAGAAAAAACGAAGTTTAAAAAGACTTTAAATCCTAAGAAAGATAAAATCGTAACTGCAAAAAAGTCTACTACCGTCAAAGGTAAATCACAAAAACAAGTGAGTTGGTACTGTCATGCCTGCGAAGAAGATAGAATGGACGATGCAATGAGGCAATGCTCGCGATGCTCCAAGTGGTACCACGAAGAGTGTGTCGGTTTGACTGCAGACGATACTGATGCCTTTCAATGTCCTGATGAATGCGAATAA
- Protein Sequence
- MPPKRALWSEDDLIAAVRAVQRGILSTYKAAERYKVPRRTIRNHLQSGSLNKSLGRKPILNDEEEAQLVQRIIRYSEMGLPVTPRILRRLVYKYCEQNNIKHNFNDEGKCAGKDWFKAFMKRHHEISVRKAQFMNPARAQKLNKFIVDDHFKKLRDIYDKFDLYNHPEKIYNMDEKGCRLTIHHQQSVLANKGAKRVHLQSSEHAESVTIAGCVNALGTAIPPMVIFKGKRLKPELYDNLPQGSLVEKSAKGYMTNELFKIFLKHLSRYKSQGPCLLIFDGAACHLDLSIVDISDSLGINLYCLPSNTTHELQPLDKAVYRSFEHHWDAELLSFLDQNRDKKLTKARFNIILSSVWSKCMTHSNITSGFKATGLYPFNPQAIPETAFAPSILTEAPAPDGAQENAQAFEHRHAQVSESGDTTPSILSEAPTPDRDQENIPPINSDQQKSSESAASSPSILKQIPIPDVLLGNISPVDYLRLATPEQTKQSPAIASTSTGQVSRESIVQRIYYRTVYGTSSSSDESDDLPLSRLKRNDFYDLLPTPVKVQTCTPTVRRKAINYRGTPVTKDLFNKYNQDKINSKKVKVNKRKKNKQDENFTDVKTGRKEKTKFKKTLNPKKDKIVTAKKSTTVKGKSQKQVSWYCHACEEDRMDDAMRQCSRCSKWYHEECVGLTADDTDAFQCPDECE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00924530;
- 90% Identity
- iTF_00146314;
- 80% Identity
- -