Basic Information

Insect: Exocentrus adspersus
Gene Symbol: pita
Assembly: GCA_029955175.1
Location: JANEYG010000014.1:2810103-2821010[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0051 0.35 12.1 0.5 1 20 225 244 225 247 0.91

2 10 0.00013 0.0089 17.2 5.4 1 23 253 275 253 275 0.99

3 10 5.4e-05 0.0037 18.3 0.8 2 23 282 303 281 303 0.91

4 10 0.00074 0.05 14.8 0.9 1 23 309 331 309 331 0.98

5 10 9.7e-05 0.0066 17.6 0.5 1 23 337 359 337 359 0.95

6 10 5.5e-05 0.0038 18.3 2.0 1 23 365 387 365 387 0.98

7 10 0.00013 0.0088 17.2 4.8 1 23 393 415 393 415 0.98

8 10 4.4e-05 0.003 18.6 1.3 1 23 430 452 430 452 0.95

9 10 0.0022 0.15 13.3 0.3 2 23 458 479 457 479 0.97

10 10 9.3e-05 0.0063 17.6 0.5 1 23 485 507 485 507 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0051	0.35	12.1	0.5	1	20	225	244	225	247	0.91
2	10	0.00013	0.0089	17.2	5.4	1	23	253	275	253	275	0.99
3	10	5.4e-05	0.0037	18.3	0.8	2	23	282	303	281	303	0.91
4	10	0.00074	0.05	14.8	0.9	1	23	309	331	309	331	0.98
5	10	9.7e-05	0.0066	17.6	0.5	1	23	337	359	337	359	0.95
6	10	5.5e-05	0.0038	18.3	2.0	1	23	365	387	365	387	0.98
7	10	0.00013	0.0088	17.2	4.8	1	23	393	415	393	415	0.98
8	10	4.4e-05	0.003	18.6	1.3	1	23	430	452	430	452	0.95
9	10	0.0022	0.15	13.3	0.3	2	23	458	479	457	479	0.97
10	10	9.3e-05	0.0063	17.6	0.5	1	23	485	507	485	507	0.96

Sequence Information

Coding Sequence: ATGAGCGCCATGGAAGATCGTGCGAATATATTACGGGAAATGCGAGTTTGTCGCTTTTGCTTGTCGAGTGATGAAAATGTGCTTACCAATATTTACGATAAACATAGCACGGATACAAAACAATCCGTACCGCTTCCACTACAGATAATGGCCTGTATTGCAATAGAGgtatttaaaaatgatgGAATGCCTCAACTGATATGTAACTATTGTCGAAAGCTTACATTGCATGCTTATACctttaaaacaaattgtaaaaaagCTGATGATGCTTTGAAGCTATTTCTTGCAACCGGTCAATTATCTAAACcctatatacaaaaaatagaGGAGataaaaataaatgagcCATCGCCTCCAAGAAAAATGAGAATTTTAAATACTGGTATGTCTGCTTCAAGTTCAATTATTGGACAGAAGTCTAAGTCTAAGCGAGTTAGAATGGAAGATGGTACTGAAATAATAACATTAAACTTTAATCCTCAAGAAGAGGAAGATGAAGTTACTGTACATCAGGGAGAAAATGAACACGAAACAATTTTAGGATATGAAGAACACACCCAAAGATGTGATGAAGATCCTTCATTGGAAGAAGGGGAGCAGTTGGTTGCTGTCGAAGAAGATGAGTCAATAAATCCCGTACTGAAAGTGAATCAAGTGAAAACGGATTGCTTTCCATGTCCACATTGTGACAGAACATTCCCTTTGAAACAGCTCCTAGACTTACATCTTCCTAATCATGATCGCGAAAGAAGATTTAAATGCGATGAATGTACAAGAAGATATTTCacaaaatatgatttacaCAAACATATTCAAACACATAATGAAGACAAGCCGTTTGATTGTATCGTTTGCAATAAATCGTTTTCGAGGGAGTCATTGTTAAAACGCCATGAGAAAATACACATTGATGTTCCAAAATATGTTTGCAGTCAGTGCGACAAAACGTTTTTGACCAAGCAGTATTTGGATGCGCACCAAGCAAagcataaaaaaagaagaccATTCACTTGTCAAGTTTGTAATAAGAGCTTCGTTTTCAAACAGGGACTTGAGCGCCACGAAGTGGTTCATAGTGAAAATAAACCACATAAATGCAATTACTGTGAAGCAAGCTTCACCTCGGCGATAAAATTGACTCGCCATATTACGTCTCATGCTGGCTTAAGACCGTATCCGTGTAAACTCTGTGGAAGGACTTTCCTTTTAAGTCACCATTTGACTCGTCATATGCGAAGCCATTATGCTGCGCATTCTTCGTCACCTGAAACCGTAATTGGTCAACATAAGTGTGACATCTGCAGCATGTCATTCAGAAGGAAAGATTCGTTGATCAACCACAGTGCCATACATTCTATGGTaaatttaagATGCGTTATTTGCAACACTACATTTGAAACAGCGAATATGGTCAAAGAACACATAACAACACATCTAGCTGGACTCCCGCATCCCTGTGAAAAATGTGACTATAGTTTTGAAACCGCGGAACAATTGGAAGAGCATGAACTAAAACATGCTGAAATGGAGTATGAAGAACAGATAGAGAAAGAGGTGATGTCTGAGGCTCTGCAACAACAGGAAGAGAATTCTGAAGAATATGAGGAGGGAGAAGTGACAGAATATACCATTGCTGATCTAAATAATTCAGATGTGGTTCCCACACCTAAAAAACGGCGAAGTGGAAGGAATGTGAGCCGTATCGGTAGTTTCCTTAAAGATGAAATGGATTCAGACTTGGAAGAAGGTGAAGCAAGTTCAAGTAATAATGAGAAAGCTGCACCTCCGACGCAAGATGAAGAAGAGGAAGTAGTAGAGCAACTGGAACATATAAAGCCTATTATTAGACAAGAAGGAACAAAAGTTTATCAAAGAAAAGCGCCACTTGAGAGAAAGATGCCAAAAATTGTACGACAACCAATTATGGTGGCACCCTTAGAACAGATAAATCAGTCTGAATCACGTATCGAAAATGTGAACCTTACCTCTGATATAAATACattaccaaataaaaaaatcgttaataTGAAACTTGGCGAAAAGGTTGTCCGTGTTCAGAAGTTCATTGTCACTAAAGAGGAGATGAAGGCTATGGCGAAGCAAGGTATTCTAGAAATGAAAGGTGGCCAGgttgttttgaaaaatccaGGTCATCCTATATTAAATGCCACGCTTAAACCCATCCAGAAAGGTGACATCGAATCCCTAATAGATAAAAAGTCAAATTCCAAACAACAGATAAAGAAATATCAAGCTCGCTCAGGATTGGAAAGGATAAGTGACCCGTCTCTGCTATTTCCTGATAAAAGCGCGGATAACAAAAATTGA
Protein Sequence: MSAMEDRANILREMRVCRFCLSSDENVLTNIYDKHSTDTKQSVPLPLQIMACIAIEVFKNDGMPQLICNYCRKLTLHAYTFKTNCKKADDALKLFLATGQLSKPYIQKIEEIKINEPSPPRKMRILNTGMSASSSIIGQKSKSKRVRMEDGTEIITLNFNPQEEEDEVTVHQGENEHETILGYEEHTQRCDEDPSLEEGEQLVAVEEDESINPVLKVNQVKTDCFPCPHCDRTFPLKQLLDLHLPNHDRERRFKCDECTRRYFTKYDLHKHIQTHNEDKPFDCIVCNKSFSRESLLKRHEKIHIDVPKYVCSQCDKTFLTKQYLDAHQAKHKKRRPFTCQVCNKSFVFKQGLERHEVVHSENKPHKCNYCEASFTSAIKLTRHITSHAGLRPYPCKLCGRTFLLSHHLTRHMRSHYAAHSSSPETVIGQHKCDICSMSFRRKDSLINHSAIHSMVNLRCVICNTTFETANMVKEHITTHLAGLPHPCEKCDYSFETAEQLEEHELKHAEMEYEEQIEKEVMSEALQQQEENSEEYEEGEVTEYTIADLNNSDVVPTPKKRRSGRNVSRIGSFLKDEMDSDLEEGEASSSNNEKAAPPTQDEEEEVVEQLEHIKPIIRQEGTKVYQRKAPLERKMPKIVRQPIMVAPLEQINQSESRIENVNLTSDINTLPNKKIVNMKLGEKVVRVQKFIVTKEEMKAMAKQGILEMKGGQVVLKNPGHPILNATLKPIQKGDIESLIDKKSNSKQQIKKYQARSGLERISDPSLLFPDKSADNKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01227617;
90% Identity: -
80% Identity: -