Eads004337.1
Basic Information
- Insect
- Exocentrus adspersus
- Gene Symbol
- LZTR1
- Assembly
- GCA_029955175.1
- Location
- JANEYG010000006.1:3054660-3057413[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.8e-11 4.3e-08 34.0 0.1 3 108 353 490 351 492 0.89 2 4 0.02 9 7.2 0.1 77 109 491 523 488 524 0.89 3 4 7.2e-17 3.2e-14 53.8 0.0 8 95 583 670 578 686 0.83 4 4 0.41 1.8e+02 3.0 0.1 76 101 685 710 680 718 0.80
Sequence Information
- Coding Sequence
- ATGAGTAGCCTTACAACCGCAGACGTTAGCGCTTTAACATTAGAAATAGGGCCTTTCGAAACAGTACACAGATGGAAGCGTATGCCAGAGTGTGACGAATTCGTTGGAGCCAGACGCAGTAAACACACCGTAGTGGCGTACAAAGACGCGATCTACGTGTTTGGAGGCGACAATGGTAAGAGCATGTTGAACGACCTCCTGCGCTTTGACGTCAAAGAGAAAAGCTGGGGCAGAGCCTTCGCTACCGGTACCCCACCCGCGCCAAGataccatcATTCTGCCGTGGTACACAACACTTCGATGTACGTATTTGGAGGATACACTGGAGATATTCATTCGAATTCAAACCTTACTAATAAGAACGACTTGTTCGAATACAAGTTTCATTCCGGGCAGTGGGTGGAGTGGAGGTTCATGGGTAAAACACCTGTGCCGAGATCAGCGCACGGTGCTGCTATCTTCGACAACAAATTGTGGATATTCGCTGGTTACGATGGGAATGCACGGTTAAACGACATGTGGACTATATCCTTGACTGGCGACGTGAGGAGTTGGGAGGAAGTCGACCAGAAAGGCGAGTGTCCTCCGACTTGTTGCAATTTTCCTGTCGCCGTCGCGCGCGACTGTATGTTTGTATTCAGCGGGCAAAGCGGAGCGAAAATTACCAACTCCTTGTTCCAGTTTAGGTTCCAAGATAAGACttgGACGCGAATATCTACAGAGCATATCTTAAGGGGCACACCCTCTCCGCCTGCCAGACGGTACGGGCATTCCATGGTGGCCTTTGACCGGCATTTGTACGTATTCGGTGGCGCTGCAGATTCAACTCTTTCGAACGATCTGCACTGCTTCGACTTGGATTCCCAAACTTGGTCGGTCATCCTGCCGGATATAGAATCGTTTGTACCATCAGGCAGGTTATTCCACGCAGCGGCGGTTGTAGGGGACGCcatgtttatttttggaggCACGGTAGATAACAACGTTAGGAGCGGCGAGATGTACAGGTTCCAGTTCTCCAGTTACCCGAAATGTACGCTACACGACGATTATGGGAAACTGTTGGAATCTAGATTATTCTGTGATGTGCAGTTTCTGGTTGGGCCAGAGGAGGAGAAGATACTCGGGCATTTAGCTTTGGTGGCCGCCAGGTCGGCTTACTTGAGAAACAAGATCCGCCAAGCCAAAGAAAACAGAGATAAACATTTGGAGAGATTATTCGGTACACATAAAGTCCCTTTCACTGATATACCACTCCTAGAAGTAAAACTACCGGACGCCGATCCAGAAGCGTTTGAAATGGTTCTGAATTACATCTACATGGACTGTATCGACCCGACAAAAAAAGCGAAAGACGAAGAAGATCCTTTTTCGAACCGTATAGTGCTTAGGATGATGGACGTTTATCGGCTTGCTGTGCAGTTTAACATGGCACGTTTAGAACACCTTTGCGTACAGTATTTAAACGCGacgatttgtttgaaaaacgTACTTGTGGCTTTACATAACGCCGACCACCTTCAACTAGACTTTATAAAAGAGCACTGTTTGCGCTTCATCGTCAAAGACAGCAACTACAACCAAATCGTTATGAGTTCGgaatttgaattattagaaAGGAGTTTGATGGTCGAAATAATCAGGAGGAAACAAATGCCGCAATACAAGGCTAACAGTGAGACTCACTTTGACACCGCTGGATGCTCGCTGGAACAAGACATGGCGATGTTCCTACGAGTGACCGGAAAGGAATTTTGTGATATAGACTTGAATTTGGACAGAACCGTAATCCCTGCCCACAAGACTATTCTAGCAGCTAGGTGTGGTTACTTCGAAGCCATGTTCAGGTCTTTCATGCCTGCCGACAGCAAAGTTAATattcaaATAGGGGAAATGATCCCTTCAAAGGAGTCTTTCGATTCGCTGCTGCGCTACATCTACTACGGCGACGTTAATATGCCTCCAGAAGATTCCCTGTACCTGTTCTCCGCGCCCTTCTTCTACGGCTTCTCAAACAACCGCCTGCAAGCGTTCTGTAAACAGAATTTAGAGATGAATGTCACCTTTGAGAATGTCATCCAGATTCTGGAGGCTGCCGACAAGATGCAAGCGACGGATATGAAAAAATACGCCTTGGATTTAATCGTGCATCACTTCACGAAAGTAGCCAAGCTTCCACGTCTACGGATGTTAAGCAAGGAACTTATCCTGGATATACTGGAAGTGCTCGCTGAAAGCTTGGAGATCAACATGAGGAACGACGTGTCAAGCGGCACTCTAAACTCCGATACTTGA
- Protein Sequence
- MSSLTTADVSALTLEIGPFETVHRWKRMPECDEFVGARRSKHTVVAYKDAIYVFGGDNGKSMLNDLLRFDVKEKSWGRAFATGTPPAPRYHHSAVVHNTSMYVFGGYTGDIHSNSNLTNKNDLFEYKFHSGQWVEWRFMGKTPVPRSAHGAAIFDNKLWIFAGYDGNARLNDMWTISLTGDVRSWEEVDQKGECPPTCCNFPVAVARDCMFVFSGQSGAKITNSLFQFRFQDKTWTRISTEHILRGTPSPPARRYGHSMVAFDRHLYVFGGAADSTLSNDLHCFDLDSQTWSVILPDIESFVPSGRLFHAAAVVGDAMFIFGGTVDNNVRSGEMYRFQFSSYPKCTLHDDYGKLLESRLFCDVQFLVGPEEEKILGHLALVAARSAYLRNKIRQAKENRDKHLERLFGTHKVPFTDIPLLEVKLPDADPEAFEMVLNYIYMDCIDPTKKAKDEEDPFSNRIVLRMMDVYRLAVQFNMARLEHLCVQYLNATICLKNVLVALHNADHLQLDFIKEHCLRFIVKDSNYNQIVMSSEFELLERSLMVEIIRRKQMPQYKANSETHFDTAGCSLEQDMAMFLRVTGKEFCDIDLNLDRTVIPAHKTILAARCGYFEAMFRSFMPADSKVNIQIGEMIPSKESFDSLLRYIYYGDVNMPPEDSLYLFSAPFFYGFSNNRLQAFCKQNLEMNVTFENVIQILEAADKMQATDMKKYALDLIVHHFTKVAKLPRLRMLSKELILDILEVLAESLEINMRNDVSSGTLNSDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01186316;
- 90% Identity
- iTF_00740125;
- 80% Identity
- -