Basic Information

Gene Symbol
lilli
Assembly
GCA_029955175.1
Location
JANEYG010000006.1:4759524-4791671[-]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 2.5e-09 7.6e-05 22.9 1.3 4 88 15 107 12 214 0.71
2 8 8.1e-10 2.4e-05 24.5 11.0 349 498 249 406 237 429 0.55
3 8 0.036 1.1e+03 -0.7 0.3 192 226 433 467 425 489 0.68
4 8 1 3e+04 -8.9 18.1 421 500 496 577 444 584 0.60
5 8 1 3e+04 -8.4 20.7 109 211 614 711 582 722 0.30
6 8 0.023 6.9e+02 -0.1 12.1 404 490 718 804 706 813 0.77
7 8 0.27 8.1e+03 -3.6 17.9 94 246 975 1113 948 1136 0.42
8 8 0.09 2.7e+03 -2.0 0.8 89 207 1225 1264 1160 1294 0.53

Sequence Information

Coding Sequence
ATGTATCTGACAGTGATACCGCGGTCGCAATGGTTTGGcgTGGAAAGAGAACGCCTCCGTGAGCGGGAACGGCAGGCGAGGGCCCAAATGTCTTCTCAAGCAGCTGACCAAGAAAGTCCGGGCAGTTCCGGAAATTTCTTGTTTAGAGAACCCATAAGGGTAAACCCGTCCACGGCCGATCCGGTCACCCAACAGATCCAGAGCAAGCTAGGCGACTTCCAGCGGGTGAGGCACTTCCTCGACCAGAAGGACTCCGGGCTTATAGGCGTGGATGGAGTGCCGCCGAGTCCGGGAGGACCGCCCCCGCCCTCATCCAGACAACAGCATCACATGCCGATGCCTCCGGGCGGCGGTCCACCCCTGCCAGGTGCTTCCAGCAGGTTGCAGCCGGCGCCGGAGTCGCGCACGGAATTCAAGAAGCCGACTCACCACCACCTGCACCACCCCCAGCAGAGGGGCGGGTACGTGAAGCCGACGGAGGGTAAGCCGCCGTACGGGGGCAGAGGGGGTTACCCCGGCCAGCCCGTGAAGCACGGCAGCGGCGCCGTCAGTCACCGGTCCAACGGGATCCTGCCGGCGAAGGGGCCGCCCCTGCAGCCGATGCCGCCGTCCAGCTCTTCGTCGTCGTCGTCCATCCGCCCCCACGGCATCGAGAGGCTTCCACGTAACGTTTACGAGCAGATCCAAGGTCCTACGGCTGGACTCAGGGAGACCCTGCCTTCCGCCACTCCGATAGCCGCCGAAGTGGATCATATATTTAAGGAAATGATAGACCAGACAACGCCTTTGACTGCGATGGCGGCCACCCCAAGGATAGAGCTTGACAATAAGTACAATTACAATCCGCTCCTTGCCAAGGTAAATATCGCTGCTGGTTCCCATAAACTCCGGAGGAATCCGGCTAATTGCATCAGCCACCGGAGACGAAGTTTAAGAGATGACCTCAACTTATCAGAGGAGAGTGATGACGACCAGAAGAAGGAAATTCTACATTCTTCTAATTTAATAGTAGAAAAgatTCTTTCACCTTTGGCCGCGACACCTGCCATCCACAATTCCAAAATGGTGCCCGAGCCTCTACCGTTGCCGACATCTCCGTTAGCCAGTTCTTCAAGCGATTCCGGTTCTGATTCCGGATCCGATAGTGAATCAAGCAGTGACGATTCCGGTGATGAAAACGTGACTTCAGTTAACACAAATCTGCAAGCGCCTCCCATACCCGACACACCAGAGTCGCCCCCAATCGAAGATAGTAAGATCAGATGGAACCTCGCCTCCTTCGTGGGCAACAACCAGAATATGTCGGATCCCCTAACCTCCCCTTTAGTATCACCCATGAAACCGTTACCGGTGAAAACCAGTCCCGACAGCAGGAAGAGGATCTCGGAGGAGTCGGACACCAGCGACTCCGCCAAGGACTTTGAAGAGATAGTGGCCAAGGCCAAAGCGTTGGCCGCGCTTGGTAACTTACCCCTGTTGTCCAGTTTCTCCGACTCGGACAACAGTAGCAAAGAGTCGGGCTCGAACAGGCGGAAACGTACCATTCAACCAGTTACCAATCCTAATTTAAGTGATAGTGATTCGGACGAGAACGAGAGAACTAGTAAAAGGAAACCGGTGATTCGCGCTAGTCCTAGGACAAAGTCAGTGGACAGTGATTCCGATTCTGAACTCAACTCGTACAGCGGCTTCGTCAACACCTTACCCAAACCCGCTCCTCCGGCGCCGGCAGAGAAACTCACCAAACCTCGAGGCAGGCCTAGGAAGAATAAACTAGGAGAGGAAACGAAAAAACCTAGAGGCCGTCCAAAGAAGACACGGTCTCCAACCACTTCGTCCAAAACCAGACGAGGTCGACCTCCAAAATCCGTAGTTCCTCCAAGTAGTTCCGATGAAGACGAGAAGTTTGAAAAACCTCCACCACCTCCACGTCGAAGAACCAAATCTAAAGTCCAAACTTCCAGCAGTTCGGACTCGGACAGTCCCGCGCCTAGGAAACGCAACTCCAGCAGTTGCACCACCATTCCGATCAGGCACGAGTCTGAAAAAGACACGTCAAGACAAGACTCTGCTAAACGAATCCACAAACATAAATCTCCCAGGTCTGAAGAGCGGAAGAAGCATTCGAAGAAAAGCTCGGACGAGGATTGGGGCGTCGGAAACAAGGCAATCATCAGGAACCACTTCCGAGACGACATCATCATAAAGAAGAAATTAGTCGATGTTCCTGAAAACATGACGTCGCCGTTCAGGAGAAAGGGTCGGCCCTCCGTATCCAAAAAGGAAACTAGTGACATGGACAAGAACAAGGCTAAAATCAAGATGAGCTCATCTTCCGAAGACTCTGACAGGGTGTTAAGTGATTCGGACAGTGACACGCCTTCCAAGAAAACTCCTAGTAAAATAGACTCTACCATCAAGGTGGAGGAGAATAAGACGATAGCCGACAAGAAGAAGAGTGATACGCTCCGGAAGCTGTTCACGCCCAAACGCGACTCGGAAGGCGGAAAGGGCGGTGGGAAAGGCGGTGGAAAAGGAGGCGGCAAAGGTAAAGGCGGGGTCAATGTGATAATAGTCGACGAGAACTACGAGCGCAGTAGCTCCTCAGTGGAGGACGAGGCCATGCCGACCATATCCAGCAACCCCACCCTCCTCTCCCCCATGTCCAACAACGATGTGAAGAGGAAAAGTCCCGAACCGCCTTCCTCCCGATACGCAGACCCGATGAAATGCATAAAGACTGAAATTCTAATTAGTGATAACAGTGGCGTCGAAAGGGCGCCACTCATGGTGAAGATAGACTTAAGTCGTATAGACGTATCCAAGATTCCCGCTCTGAGGAAGCATCTGGAGGGTACCAGGTCCTGGTTGTTGGAACCCAAACAAGAAGttataaaagataaaagtGACTGCGAAAGTACGTCCAAGAAATCGCTGAAGGATAGCGATAACGAGGCGAAGAGGCCGTTACCGCCCAAGTCCGAGCAGGATCACGTAGACTGGAAGCACAAGTTGAAGAAGCGCAAGAGGAGGAACAGCTCCAGTTCCGTATCTTCCTTCTCGACCGCCAGTAACGTGTCGCACAGCAGTTACAAGAAGGATTACCAGAAAAAGGAGAAAGGCAATCCGAAATCCAAAAGGCGAAGGGAGGACGTCGAAGCCGTCGCGCGATCTCAAGCAGATAATCTCAGTTTAATTAACGCCCCGCCTACCAACCACGAACGGGAAGCAGGCAAGAACCAGACTGTTCAGTACTCAGAAGCGGGGAACAGCTACGCTCATCCCAGCAGAGAGTACCACTCGTACTTCGAACCTCCGGAGGAGCCATCTGAATACGAGGAGAGAGATCAAAACCAGTACCTGAGCGATGCAAAGAGATTAAAGCACATGGCCGACAGAGAGACTGATACGATTAAACAGTGCATGTTGTACCTGGAGGCTGTACTCTTCTTCTTGTTAACTGGTAACACGATGGAACAGGAAAGTGTTTCCGAAAAGGCAGCTTTCACCATGTACAAAGACACATTGGCATTAATCAAATATATTTCCTCAAAGTTCAGAAGCCAGCAGAACATGTCCTCAGTTCATACCAAACTGGCCGTATTAAGTTACCGGTGCCAAGCTCtactattttataaactgtttaaaatgAGGAAGCAAGAGGCGAAGGAAGCGCAGAAAATTGTTAGCGATTACTGCACTAAGAACGCCATTCCTCAAGATCAACAGAACCACCAGCAGGGCCAGGGTACTCCCTCTCCCTTGTCGCCTACGCCTTCACCGGCGGGATCCGTGGGATCCGTAGGCAGCCAGTCTTCGGGCTATAGCAGCGGGGAGTTGGCGGCTAGGGGCAACAACGCCCCCATACCCGTGACCCACGCCCAGAATGCGGGCGCCTGGCTACCGCTCTCTGTCTTCAACGCCGTCGCCTTGCAGAACCAGCTATTCACATATCAAATTTCATTCCAGGACCATTGGGATATGGCTGATTCGCTCATCATCAAAGGCAAGCATACAGATTTCTTCATCGACCTGGACAGGCAGTGCAGGCCTCTGACGATGCACAGTTCCCTGATAGACTTGGTGAGGTACGTGAGGGAAGGCATAAACCGCCTGAAGAAGGAGAGTTAG
Protein Sequence
MYLTVIPRSQWFGVERERLRERERQARAQMSSQAADQESPGSSGNFLFREPIRVNPSTADPVTQQIQSKLGDFQRVRHFLDQKDSGLIGVDGVPPSPGGPPPPSSRQQHHMPMPPGGGPPLPGASSRLQPAPESRTEFKKPTHHHLHHPQQRGGYVKPTEGKPPYGGRGGYPGQPVKHGSGAVSHRSNGILPAKGPPLQPMPPSSSSSSSSIRPHGIERLPRNVYEQIQGPTAGLRETLPSATPIAAEVDHIFKEMIDQTTPLTAMAATPRIELDNKYNYNPLLAKVNIAAGSHKLRRNPANCISHRRRSLRDDLNLSEESDDDQKKEILHSSNLIVEKILSPLAATPAIHNSKMVPEPLPLPTSPLASSSSDSGSDSGSDSESSSDDSGDENVTSVNTNLQAPPIPDTPESPPIEDSKIRWNLASFVGNNQNMSDPLTSPLVSPMKPLPVKTSPDSRKRISEESDTSDSAKDFEEIVAKAKALAALGNLPLLSSFSDSDNSSKESGSNRRKRTIQPVTNPNLSDSDSDENERTSKRKPVIRASPRTKSVDSDSDSELNSYSGFVNTLPKPAPPAPAEKLTKPRGRPRKNKLGEETKKPRGRPKKTRSPTTSSKTRRGRPPKSVVPPSSSDEDEKFEKPPPPPRRRTKSKVQTSSSSDSDSPAPRKRNSSSCTTIPIRHESEKDTSRQDSAKRIHKHKSPRSEERKKHSKKSSDEDWGVGNKAIIRNHFRDDIIIKKKLVDVPENMTSPFRRKGRPSVSKKETSDMDKNKAKIKMSSSSEDSDRVLSDSDSDTPSKKTPSKIDSTIKVEENKTIADKKKSDTLRKLFTPKRDSEGGKGGGKGGGKGGGKGKGGVNVIIVDENYERSSSSVEDEAMPTISSNPTLLSPMSNNDVKRKSPEPPSSRYADPMKCIKTEILISDNSGVERAPLMVKIDLSRIDVSKIPALRKHLEGTRSWLLEPKQEVIKDKSDCESTSKKSLKDSDNEAKRPLPPKSEQDHVDWKHKLKKRKRRNSSSSVSSFSTASNVSHSSYKKDYQKKEKGNPKSKRRREDVEAVARSQADNLSLINAPPTNHEREAGKNQTVQYSEAGNSYAHPSREYHSYFEPPEEPSEYEERDQNQYLSDAKRLKHMADRETDTIKQCMLYLEAVLFFLLTGNTMEQESVSEKAAFTMYKDTLALIKYISSKFRSQQNMSSVHTKLAVLSYRCQALLFYKLFKMRKQEAKEAQKIVSDYCTKNAIPQDQQNHQQGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELAARGNNAPIPVTHAQNAGAWLPLSVFNAVALQNQLFTYQISFQDHWDMADSLIIKGKHTDFFIDLDRQCRPLTMHSSLIDLVRYVREGINRLKKES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-