Basic Information

Insect: Euzophera pinguis
Gene Symbol: -
Assembly: GCA_947363495.1
Location: OX376181.1:803825-814733[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.039 3 9.1 1.2 2 23 293 315 292 315 0.94

2 14 0.09 7 7.9 0.3 1 23 321 343 321 343 0.98

3 14 0.011 0.87 10.8 3.3 1 23 349 371 349 371 0.96

4 14 0.0013 0.1 13.7 0.2 3 20 379 396 378 398 0.93

5 14 0.35 27 6.1 0.4 2 23 429 451 428 451 0.95

6 14 5.9 4.7e+02 2.2 3.5 2 23 458 479 457 479 0.95

7 14 0.0042 0.33 12.1 0.5 2 23 486 507 486 507 0.95

8 14 0.016 1.2 10.3 0.0 2 20 514 532 513 533 0.94

9 14 0.36 28 6.0 1.5 2 23 550 571 549 571 0.97

10 14 0.0035 0.27 12.4 0.8 1 23 578 600 578 600 0.98

11 14 4e-05 0.0031 18.5 1.1 3 23 607 627 606 627 0.98

12 14 6.4e-05 0.005 17.8 1.1 1 23 633 655 633 655 0.97

13 14 8.9e-06 0.0007 20.5 0.3 1 23 661 683 661 683 0.95

14 14 2.1e-05 0.0016 19.4 2.6 1 23 689 712 689 712 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.039	3	9.1	1.2	2	23	293	315	292	315	0.94
2	14	0.09	7	7.9	0.3	1	23	321	343	321	343	0.98
3	14	0.011	0.87	10.8	3.3	1	23	349	371	349	371	0.96
4	14	0.0013	0.1	13.7	0.2	3	20	379	396	378	398	0.93
5	14	0.35	27	6.1	0.4	2	23	429	451	428	451	0.95
6	14	5.9	4.7e+02	2.2	3.5	2	23	458	479	457	479	0.95
7	14	0.0042	0.33	12.1	0.5	2	23	486	507	486	507	0.95
8	14	0.016	1.2	10.3	0.0	2	20	514	532	513	533	0.94
9	14	0.36	28	6.0	1.5	2	23	550	571	549	571	0.97
10	14	0.0035	0.27	12.4	0.8	1	23	578	600	578	600	0.98
11	14	4e-05	0.0031	18.5	1.1	3	23	607	627	606	627	0.98
12	14	6.4e-05	0.005	17.8	1.1	1	23	633	655	633	655	0.97
13	14	8.9e-06	0.0007	20.5	0.3	1	23	661	683	661	683	0.95
14	14	2.1e-05	0.0016	19.4	2.6	1	23	689	712	689	712	0.98

Sequence Information

Coding Sequence: ATGTCAGAAACAACAGATCCAAGTGAAGAACCGGCACAATCGGCACTAAATATGTCTATGAACCTTGACTATACTCAACACATTCACTACAATGAAAACCAATCTTCTATGTTCAGACAACAGTTCGAATTTCTTTCTGAACCATCGACAACAACATCCAAAACCGTGGACATGAGTGGACAAAGCGAAGAAATAACAAAACTTACTAAACCAACAACAGAAACTGAACCTCTTGAATCATCTAAAGAAATTGACGTAAAACTAAGCTATTGCCGATTTTGCGCCACAAAAATAGACTGTCGGGAACTACTTGACCTATCAACCGAAGACATCATTGGGAAGTACCAAAAATTGCTCTTATATCTTAAATTAGACGTAGATTTTTCGACGAATAATCCATTACCAAAATATGCTTGTTCGTCTTGCCATAACACGTGTTTGGAGACTTACAGATTCTTTTTGAAGGTTGGTAAGGCTCAAGAGGACCTCAACGCCTTGTATGGTAAAAGTGGCATGGTTTTGAAAGATTTGGAAGGTTCCGGTAATAAAGGAGCGCCAATGGAGATTGACGTAATTCAGAAAATGGTAATCGGAAAAGGGATTATTAAGACCGAATTGGAGGAGTGTTTTGAGGAGCCCCGTGCGGATGAAAGTGCTTCAGATACTGAACCACAGTACACAGATATGGACAGCATCGCAGCACCGACAACCAGCAATAAACAGGCAACATTAAAGCCTAAAAACGAGACAGAAACTCAAACCAAACTCCCAAAGAAAACCACGTACAAAGTTAAGAAGACAATTGTAAAAAGTCTTAAAAAGAAATCGGAGACAAACGTAAAAAATGTAACATTTTCATGGGCGAGTTACTTGTGGTCTTGCGATCACTGTAAAGCTGAATATAATACCATGGATGAACTACGGTTACATAGTAGATATACACATAATTGTTGTTACGGATTCAGTTGTGTTGATTGTAACGATGAGTTTAATACGTTTAACGCTTTTGTCGAGCATGTGAGGTCACATAGGGAGTATTTGAGGTTCTTCTGCCAGTACTGCAACAGGAAGTTCAGAAACAAGGAGGAGTGTGCCGCGCACGCCCTCACCCACTGGGACAATGGACAGAAGATATGCGAGTACTGCGGGGAAATATTCCCGGATCATGATACTCTGAGGCAGCATAAGAGTTCTGGCAGGCCAAAACCGCTTTCTCATAATACGAGACGCAAGAGACCTCGGCAGGTGGAAGATAAGCTGAGCTCGTGGAATGATTACCGATGGACTTGTCAAGATTGCTACCAGACGATGCCAAACGTCCACACTTTAAGGATTCACGTGAGAGAGGTCCATTACAAATGTTTTGCGATGAAATGCTTGGATTGTCTGAGAGTTCACCGCAGTCACGGAGATCTGGTGAAACATATACACGGACATCGGCCTAATTTGAAGCGCTACTGCCACTACTGCAACCAGTACTTCGAGAATCCGGACGAAATGGACAACCACATAGAAGAACACTACTCGGGTCTGCGGAAACCTTGCTACGGATGCGGAGAGATTTTCGAAAACGACGAGCTCCTAAGGAAACATATCTTTGACTACGGAGCAATGAGAAGACCTGGGCCCCATTCCGAGGAAGAAGTCACATGTGACATTTGCTCGAAGAACTGCTTAACCGTTGGAAAATTAAAGATTCACAGAAAAATCCACGAATACAAAGAAAGGTGCTACGTCTGCGATACTTGTGGAAATTCGTATTTCAACTTCTGGACGTACCAATCTCACATAAAAATCCACGGTGAACGTTCGGAAATATGTAAAATTTGCAAAAAAGGGTTCCCGACTAAAGTTAAATTGAAGAATCATGCGAAAACACATTTAGTTGACCGTCCGTTCGCTTGTGATCAGTGCGGCAGTGCTTTTAAAACAAAAAATAAGTTGACGAGGCATAAAATGATTCATACAGATGCTAAGCCGTATGTCTGTGTTATATGTGATAAAAGTTTTAGACAGAAAAATGGTTTGAAGAATCATGCTGCTCAGCATACTGGTGTTAGGCCTTATCAGTGTGAATTTTGTGATAGGACGTTTACTAACAATCCTAATAGGGATAAACATATGCGGAGAAGGCATGGTGTTCCGTTGTATAAAGCCAAGGAAGTGCCTCAGGAAGTTACGGATTCGAAAGCTAAGGAATGGCTGAGTCAAGTCACGGCTAACCAGAAGAAGAAAAAGGACAATAGTGATATGCAAGCGTCGAATTCGATGATGTTGTGA
Protein Sequence: MSETTDPSEEPAQSALNMSMNLDYTQHIHYNENQSSMFRQQFEFLSEPSTTTSKTVDMSGQSEEITKLTKPTTETEPLESSKEIDVKLSYCRFCATKIDCRELLDLSTEDIIGKYQKLLLYLKLDVDFSTNNPLPKYACSSCHNTCLETYRFFLKVGKAQEDLNALYGKSGMVLKDLEGSGNKGAPMEIDVIQKMVIGKGIIKTELEECFEEPRADESASDTEPQYTDMDSIAAPTTSNKQATLKPKNETETQTKLPKKTTYKVKKTIVKSLKKKSETNVKNVTFSWASYLWSCDHCKAEYNTMDELRLHSRYTHNCCYGFSCVDCNDEFNTFNAFVEHVRSHREYLRFFCQYCNRKFRNKEECAAHALTHWDNGQKICEYCGEIFPDHDTLRQHKSSGRPKPLSHNTRRKRPRQVEDKLSSWNDYRWTCQDCYQTMPNVHTLRIHVREVHYKCFAMKCLDCLRVHRSHGDLVKHIHGHRPNLKRYCHYCNQYFENPDEMDNHIEEHYSGLRKPCYGCGEIFENDELLRKHIFDYGAMRRPGPHSEEEVTCDICSKNCLTVGKLKIHRKIHEYKERCYVCDTCGNSYFNFWTYQSHIKIHGERSEICKICKKGFPTKVKLKNHAKTHLVDRPFACDQCGSAFKTKNKLTRHKMIHTDAKPYVCVICDKSFRQKNGLKNHAAQHTGVRPYQCEFCDRTFTNNPNRDKHMRRRHGVPLYKAKEVPQEVTDSKAKEWLSQVTANQKKKKDNSDMQASNSMML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00146739;
90% Identity: -
80% Identity: -